Clone BO11115 Report

Search the DGRC for BO11115

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:111
Well:15
Vector:pDNR-Dual
Associated Gene/Transcriptbib-RA
Protein status:BO11115.pep: validated full length
Sequenced Size:2122

Clone Sequence Records

BO11115.3prime Sequence

916 bp (825 high quality bases) assembled on 2006-04-19

> BO11115.3prime
ATGGTCTAGAAAGCTTGCGTTGGGCCTCAGCGGCAGCATTCCATAATGTT
GCTGCTGTTGTTGCATCATCATCTGTTGCTGCTGCTGCTGCTGTTGTTGC
TGCTGCTGCTGCTGTTGTTGTTGCTGCTGTTGGGCTGTCACCGCTGATCC
TTGCGAGGTTGTGTAGGTCACGGCGCACGCTGCCGGCTGGGATACCACAA
CTGGAGCACTAACTTTTCGCTCCGACTGCGTGCGAATGGGTTGCGGGTGG
GCTGCATTCGGCTGTGGGGGCGGGGCATACATCAGCATGGGCGGTGGCGG
AGGTGATGGCTCCACGCTGGGATGACGAGCTGGCGGCGTGACAGCCGAGC
CGTGATATGAGCCATAGGAGCTGTCGTCCGACTGCGCCGACTGTCCGCGA
TTCCTTGGTCCCGTCACGCCGTACATTTGCTGCGGGTCACGTCGGTCATA
CTTGTGATTTCCGTCCATCGGCGTCGGATTTGTGCGTGTGCCGTAGACTG
GCTGGAAGCCCTGCGGCTGCTGCTGAGGATCGGACATCATCTGTGGCGGA
GGCTGCATCTGTTGCTGCTGCACTCCCATGTTGGGCTGTTGTTGCTGAAG
CTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTGGATTGGCTGCTGCTGTC
CGCGCATGGAGCCCCTCATTCCGTAGATGCTCTCGCTGCGCTGCTGCATC
TGATTCTGGACATTTTGGTTCTGTAAATGGGAAGATTGAGGTGCGGGTGC
CACTTGTTGCTGTTGCTGTTGTTGCTGTTGCTGCTGCTGCTGGGTGCGCA
TGGGATAAAGACTCTGGGCGGGCACCAGAAGACCTGGACGCGGCACAATG
TCTCGATTGATGGCCGTGTTGCTCTTGGCGTACACAGATTGCGAGCGATT
CAGGTTGCTTCTGGTC

BO11115.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4722-PA 2091 bib-RA 1191..2088 916..19 4465 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 1496..2393 916..19 4475 99.9 Minus
bib-RA 3276 CG4722-RA 1496..2393 916..19 4475 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9993758..9994655 916..19 4475 99.9 Minus
Blast to na_te.dros performed 2015-02-12 04:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2419 648..542 230 71 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2512 723..512 230 61 Minus

BO11115.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:26 Download gff for BO11115.3prime
Subject Subject Range Query Range Percent Splice Strand
bib-PA 1191..2091 16..916 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:19:05 Download gff for BO11115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4722-PA 1191..2091 16..916 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:21:20 Download gff for BO11115.3prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 1496..2404 8..916 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:05:29 Download gff for BO11115.3prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 1496..2404 8..916 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:05:29 Download gff for BO11115.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9993758..9994666 8..916 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:21:20 Download gff for BO11115.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9993758..9994666 8..916 99   Minus

BO11115.5prime Sequence

943 bp (856 high quality bases) assembled on 2006-04-19

> BO11115.5prime
GAAGTTATCAGTCGACATGGCCGACGAAAGTCTGCACACCGTGCCCCTGG
AGCACAACATAGACTACCACATCGTGACGCTATTCGAGCGCCTGGAGGCG
ATGCGTAAGGACTCGCACGGCGGTGGCCACGGGGTCAACAATCGCCTGTC
CAGCACCCTGCAGGCTCCCAAGCGGAGCATGCAGGCTGAGATTCGCACGC
TGGAGTTTTGGAGATCCATCATCAGCGAGTGTCTGGCCTCCTTCATGTAC
GTGTTCATCGTCTGCGGTGCCGCCGCTGGCGTCGGAGTGGGGGCCAGTGT
GTCGTCCGTGCTTTTGGCCACGGCTCTGGCCTCCGGCCTGGCGATGGCTA
CACTGACGCAGTGCTTCCTCCACATCTCGGGCGCCCACATCAATCCCGCC
GTAACCCTGGCTCTATGCGTAGTGCGATCCATATCTCCGATCCGGGCTGC
CATGTACATAACCGCACAATGTGGCGGAGGAATCGCCGGAGCTGCTCTGC
TTTATGGCGTAACTGTGCCTGGTTACCAGGGGAATCTGCAGGCCGCCATC
TCACATAGCGCTGCTCTGGCCGCCTGGGAAAGATTCGGTGTGGAATTCAT
CCTCACCTTTCTGGTGGTTCTGTGCTATTTCGTATCCACGGATCCCATGA
AGAAGTTCATGGGCAATTCGGCCGCCTCGATTGGATGTGCTTACAGCGCC
TGCTGCTTTGTGTCGATGCCGTACCTGAATCCAGCCCGCTCCCTGGGTCC
TTCGTTTGTGCTTAACAAATGGGACAGCCATTGGGTGTACTGGTTCGGAC
CACTGGTGGGCGGCATGGCCTCTGGCCTGGTGTACGAGTACATCTTCAAC
TCGCGCAACCGCAACCTGCGCCACAACAAGGGCAGCATCGACAACGATTC
CCAGTCGATTCACTCGGAGGACGAACTGANCTACGACATGGAT

BO11115.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4722-PA 2091 bib-RA 1..885 17..901 4425 100 Plus
CG4722-PA 2091 bib-RA 889..927 905..943 176 97.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 302..1232 13..943 4599 99.7 Plus
bib-RA 3276 CG4722-RA 302..1232 13..943 4599 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9993266..9993494 715..943 1089 98.3 Plus
2L 23513712 2L 9992254..9992462 507..715 1045 100 Plus
2L 23513712 2L 9984946..9985146 13..213 1005 100 Plus
2L 23513712 2L 9986787..9986956 212..381 850 100 Plus
2L 23513712 2L 9987600..9987727 380..507 640 100 Plus
Blast to na_te.dros performed on 2015-02-02 13:16:16 has no hits.

BO11115.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:27 Download gff for BO11115.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-PA 1..927 17..943 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:19:07 Download gff for BO11115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4722-PA 1..927 17..943 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:08:15 Download gff for BO11115.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 294..1232 5..943 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:47:17 Download gff for BO11115.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 294..1232 5..943 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:47:17 Download gff for BO11115.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9984938..9985146 5..213 98 -> Plus
2L 9986789..9986955 214..380 100 -> Plus
2L 9987601..9987727 381..507 100 -> Plus
2L 9992255..9992462 508..715 100 -> Plus
2L 9993267..9993494 716..943 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:08:15 Download gff for BO11115.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9984938..9985146 5..213 98 -> Plus
arm_2L 9986789..9986955 214..380 100 -> Plus
arm_2L 9987601..9987727 381..507 100 -> Plus
arm_2L 9992255..9992462 508..715 100 -> Plus
arm_2L 9993267..9993494 716..943 98   Plus

BO11115.complete Sequence

2122 bp (2122 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ632001

> BO11115.complete
GAAGTTATCAGTCGACATGGCCGACGAAAGTCTGCACACCGTGCCCCTGG
AGCACAACATAGACTACCACATCGTGACGCTATTCGAGCGCCTGGAGGCG
ATGCGTAAGGACTCGCACGGCGGTGGCCACGGGGTCAACAATCGCCTGTC
CAGCACCCTGCAGGCTCCCAAGCGGAGCATGCAGGCTGAGATTCGCACGC
TGGAGTTTTGGAGATCCATCATCAGCGAGTGTCTGGCCTCCTTCATGTAC
GTGTTCATCGTCTGCGGTGCCGCCGCTGGCGTCGGAGTGGGGGCCAGTGT
GTCGTCCGTGCTTTTGGCCACGGCTCTGGCCTCCGGCCTGGCGATGGCTA
CACTGACGCAGTGCTTCCTCCACATCTCGGGCGCCCACATCAATCCCGCC
GTAACCCTGGCTCTATGCGTAGTGCGATCCATATCTCCGATCCGGGCTGC
CATGTACATAACCGCACAATGTGGCGGAGGAATCGCCGGAGCTGCTCTGC
TTTATGGCGTAACTGTGCCTGGTTACCAGGGGAATCTGCAGGCCGCCATC
TCACATAGCGCTGCTCTGGCCGCCTGGGAAAGATTCGGTGTGGAATTCAT
CCTCACCTTTCTGGTGGTTCTGTGCTATTTCGTATCCACGGATCCCATGA
AGAAGTTCATGGGCAATTCGGCCGCCTCGATTGGATGTGCTTACAGCGCC
TGCTGCTTTGTGTCGATGCCGTACCTGAATCCAGCCCGCTCCCTGGGTCC
TTCGTTTGTGCTTAACAAATGGGACAGCCATTGGGTGTACTGGTTCGGAC
CACTGGTGGGCGGCATGGCCTCTGGCCTGGTGTACGAGTACATCTTCAAC
TCGCGCAACCGCAACCTGCGCCACAACAAGGGCAGCATCGACAACGATTC
CAGTTCGATTCACTCGGAGGACGAACTGAACTACGACATGGATATGGAGA
AGCCCAACAAGTATCAGCAGTCGCAGGGCACCTACCCGCGTGGCCAGTCC
AATGGCAATGGCGGAGGACAGGCGGCCGGAAATGGTCAGCACCAAGCTGC
CAACATGGGCCAGATGCCGGGCGTAGTGGCCAATGCCGGTCAGGGCAATT
ACTGCCAGAATCTGTACACTGCTCCGCCGCTCTCCTCGAAGTACGATCAG
CAGCAGGAACCTCTGTACGGTGGAACCCGCTCACTGTACTGCCGTTCGCC
CACTCTGACCAGAAGCAACCTGAATCGCTCGCAATCTGTGTACGCCAAGA
GCAACACGGCCATCAATCGAGACATTGTGCCGCGTCCAGGTCCTCTGGTG
CCCGCCCAGAGTCTTTATCCCATGCGCACCCAGCAGCAGCAGCAACAGCA
ACAACAGCAACAGCAACAAGTGGCACCCGCACCTCAATCTTCCCATTTAC
AGAACCAAAATGTCCAGAATCAGATGCAGCAGCGCAGCGAGAGCATCTAC
GGAATGAGGGGCTCCATGCGCGGACAGCAGCAGCCAATCCAGCAGCAACA
ACAACAGCAGCAGCAGCAGCAGCTTCAGCAACAACAGCCCAACATGGGAG
TGCAGCAGCAACAGATGCAGCCTCCGCCACAGATGATGTCCGATCCTCAG
CAGCAGCCGCAGGGCTTCCAGCCAGTCTACGGCACACGCACAAATCCGAC
GCCGATGGACGGAAATCACAAGTATGACCGACGTGACCCGCAGCAAATGT
ACGGCGTGACGGGACCAAGGAATCGCGGACAGTCGGCGCAGTCGGACGAC
AGCTCCTATGGCTCATATCACGGCTCGGCTGTCACGCCGCCAGCTCGTCA
TCCCAGCGTGGAGCCATCACCTCCGCCACCGCCCATGCTGATGTATGCCC
CGCCCCCACAGCCGAATGCAGCCCACCCGCAACCCATTCGCACGCAGTCG
GAGCGAAAAGTTAGTGCTCCAGTTGTGGTATCCCAGCCGGCAGCGTGCGC
CGTGACCTACACAACCTCGCAAGGATCAGCGGTGACAGCCCAACAGCAGC
AACAACAACAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAG
ATGATGATGCAACAACAGCAGCAACATTATGGAATGCTGCCGCTGAGGCC
CAACGCAAGCTTTCTAGACCAT

BO11115.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 2214 CG4722-PB 1..2088 17..2104 10440 100 Plus
bib-RA 2091 CG4722-PA 1..2088 17..2104 10440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 302..2393 13..2104 10460 100 Plus
bib-RA 3276 CG4722-RA 302..2393 13..2104 10460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9993266..9994655 715..2104 6950 100 Plus
2L 23513712 2L 9992254..9992462 507..715 1045 100 Plus
2L 23513712 2L 9984946..9985146 13..213 1005 100 Plus
2L 23513712 2L 9986787..9986956 212..381 850 100 Plus
2L 23513712 2L 9987600..9987727 380..507 640 100 Plus
Blast to na_te.dros performed 2014-11-28 00:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2419 1475..1581 230 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2512 1400..1611 230 61 Plus

BO11115.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:23 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 1..2091 17..2107 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:12:13 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 292..2402 5..2115 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:20 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 306..2393 17..2106 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:23 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 292..2402 5..2115 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:45 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 306..2393 17..2106 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:45 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9992255..9992462 508..715 100 -> Plus
2L 9987601..9987727 381..507 100 -> Plus
2L 9984950..9985146 17..213 100 -> Plus
2L 9986789..9986955 214..380 100 -> Plus
2L 9993267..9994655 716..2106 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:20 Download gff for BO11115.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9987601..9987727 381..507 100 -> Plus
arm_2L 9992255..9992462 508..715 100 -> Plus
arm_2L 9984950..9985146 17..213 100 -> Plus
arm_2L 9986789..9986955 214..380 100 -> Plus
arm_2L 9993267..9994655 716..2106 99   Plus

BO11115.pep Sequence

Translation from 16 to 2122

> BO11115.pep
MADESLHTVPLEHNIDYHIVTLFERLEAMRKDSHGGGHGVNNRLSSTLQA
PKRSMQAEIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSVLL
ATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITA
QCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLV
VLCYFVSTDPMKKFMGNSAASIGCAYSACCFVSMPYLNPARSLGPSFVLN
KWDSHWVYWFGPLVGGMASGLVYEYIFNSRNRNLRHNKGSIDNDSSSIHS
EDELNYDMDMEKPNKYQQSQGTYPRGQSNGNGGGQAAGNGQHQAANMGQM
PGVVANAGQGNYCQNLYTAPPLSSKYDQQQEPLYGGTRSLYCRSPTLTRS
NLNRSQSVYAKSNTAINRDIVPRPGPLVPAQSLYPMRTQQQQQQQQQQQQ
QVAPAPQSSHLQNQNVQNQMQQRSESIYGMRGSMRGQQQPIQQQQQQQQQ
QQLQQQQPNMGVQQQQMQPPPQMMSDPQQQPQGFQPVYGTRTNPTPMDGN
HKYDRRDPQQMYGVTGPRNRGQSAQSDDSSYGSYHGSAVTPPARHPSVEP
SPPPPPMLMYAPPPQPNAAHPQPIRTQSERKVSAPVVVSQPAACAVTYTT
SQGSAVTAQQQQQQQQQQQQQQQQQQQQMMMQQQQQHYGMLPLRPNASFL
DH

BO11115.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:19
Subject Length Description Subject Range Query Range Score Percent Strand
bib-PB 737 CG4722-PB 1..696 1..696 3677 100 Plus
bib-PA 696 CG4722-PA 1..696 1..696 3677 100 Plus
Drip-PE 239 CG9023-PE 15..236 63..295 365 36.1 Plus
Drip-PD 242 CG9023-PD 18..239 63..295 365 36.1 Plus
Drip-PC 243 CG9023-PC 19..240 63..295 365 36.1 Plus