Clone Sequence Records
BO11122.3prime Sequence
905 bp (769 high quality bases) assembled on 2006-04-19
> BO11122.3prime
ATGGTCTAGAAAGCTTGCACATTGTTCGAAAATTGGAATTATGGGTGAAG
TGGGCCAGTCCTCCTCCTCCTCGGAGCTAATACTCTCGGTTCTAGAACGC
AGGCCATCGTCGAGGGCGTTGGGGATGCCTTCCTCAATGGTGGGCAGGTC
GGAGGAGAAGCGGTTGATCGGGCGCAAGACGCGCAGCGTGCGACTGGACA
GCTTCCAGACAAGCCGCTGCTTGTAGGGCGCCTTGTTCTGCCCGTTGTAA
TGGGACAGAATACCCGAAACGATGCTGAAGCCGCAGGTGAAAACGCGATC
AGGAATCCTCATGTACTGCTGCAGGAAGAGAATGTACTCGAAGACGTGCT
TCAGCTCCGGACTGCCGCGGGTGTACGACTCCTTGATGTGGAAGTCCAGG
TGCAGGCAGATGAGCACCAGCGCCAGCGTCGAGGGCGTGATCACCGTGGT
CTTCACGTCGCACATCAGGATCTCCAGGCGGTTCTCCAGTTCCTCCAGCT
TGATGAGCTGCTGGTAGAACTTGAAAAAGTCGCCGCCGATCTCCTTCGCC
AAGTTGCGGAAGAGGGCGTAGTAGATGCGCAGGTAGCTCACAGAAGTGAT
CGGTGCATGTCCCATCTGGACGCCCAGCTTGTTGGCAATCACGCCGGCCA
TGCGTTCCAGATCACCAGCGGTACAACCACACTGAGATATTGTAACCAGA
TCCTCGGCGGGAATGGGTTTCAAGTCCAGCTGCTTGATGGCCAAGTGGAA
CGAGGCCACGCTCATGCAGGCCATGTGCTTCGGCTTGACGGCCATGCGAT
CCAGGAAGCGGTCCACCAGGCTCATGGCCGAGAACAGGACGTCGGAGGGC
AGCTCGTACCACATCTTCAGGCAGCGCAGCACGTAGGCGGATCCATCTCG
TCCTC
BO11122.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:17:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11525-PD | 1701 | CycG-RD | 812..1698 | 905..19 | 4435 | 100 | Minus |
| CG11525-PA | 1701 | CycG-RA | 812..1698 | 905..19 | 4435 | 100 | Minus |
| CG11525-PB | 1701 | CycG-RB | 812..1698 | 905..19 | 4435 | 100 | Minus |
| CG11525-PC | 1701 | CycG-RC | 812..1698 | 905..19 | 4435 | 100 | Minus |
| CG11525-PE | 849 | CycG-RE | 1..846 | 864..19 | 4230 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycG-RF | 4450 | CG11525-RF | 930..1816 | 905..19 | 4435 | 100 | Minus |
| CycG-RC | 2687 | CG11525-RC | 1328..2214 | 905..19 | 4435 | 100 | Minus |
| CycG-RB | 3132 | CG11525-RB | 1773..2659 | 905..19 | 4435 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:12:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31600674..31601051 | 307..684 | 1890 | 100 | Plus |
| 3R | 32079331 | 3R | 31601112..31601335 | 682..905 | 1120 | 100 | Plus |
| 3R | 32079331 | 3R | 31600389..31600604 | 92..307 | 1080 | 100 | Plus |
| 3R | 32079331 | 3R | 31599276..31599354 | 19..97 | 380 | 98.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:12:42 has no hits.
BO11122.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:34 Download gff for
BO11122.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-PD | 812..1701 | 18..905 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:19:17 Download gff for
BO11122.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11525-PC | 812..1701 | 18..905 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:16:46 Download gff for
BO11122.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 1779..2665 | 19..905 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:36:21 Download gff for
BO11122.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 1773..2659 | 19..905 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:36:21 Download gff for
BO11122.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31601112..31601335 | 682..905 | 100 | | Plus |
| 3R | 31600674..31601048 | 307..681 | 100 | <- | Plus |
| 3R | 31599276..31599348 | 19..91 | 100 | <- | Plus |
| 3R | 31600389..31600603 | 92..306 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:16:46 Download gff for
BO11122.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27424998..27425070 | 19..91 | 100 | <- | Plus |
| arm_3R | 27426111..27426325 | 92..306 | 100 | <- | Plus |
| arm_3R | 27426396..27426770 | 307..681 | 100 | <- | Plus |
| arm_3R | 27426834..27427057 | 682..905 | 100 | | Plus |
BO11122.5prime Sequence
902 bp (804 high quality bases) assembled on 2006-04-19
> BO11122.5prime
GAAGTTATCAGTCGACATGTCTGTCCCTGTACGCTACTCCTCTGCTGCCG
CCGAATACGCCGCCGAAGTTGATTGTGAGTTGGAGAGCACTCTGCAACAG
CAGCAACAGTTGCACTTGCAACAGCAATACGAGCAATACCAGCACTACCA
GTACCAACGGGAGCAGGATATCGCCTACTATTGCCAGTTGCAGGCGGCGC
GGCAGCAGGAGCAGTTGATGCAGCAGAGGACATCGATGTCGTCGTCGGTT
ATGCCAGGCCTAGCCTTGCCCCAGGATCACCAGGACCACCCAGCCGCCCT
TTTGAACGGACCCCACAACAACAACATCGGACTCGCCATGGACGCCCACA
GCATCAACGCCATTCTGGTCGACGACGAGCAGCCCTCGACTTCGGCCCAG
GCTGCCGCCGCTGCTGCCGCATCCGCGGGTGGATCTGCTGGTGCGGGATC
GGGATCGGGATTGGGTGGTGCTATCGGTGGGGGCAAGCTGGCCAACGGCA
TTAACCGCAATGCAGAGATGCCAACTGATTGGATGAGGATTGCGGACGAG
GGCCGGTATGGGACACCGGGTGCTGCTGGCTTGGAATATCAGAAGTACGA
ACAACAACAACAACTGGAGGATCTGGCGGAGTCCGAGGCAGGAGCCGTCG
GTGGAGCCAGCAACAACAACGGCGAATCGTCGTCGTCCTTGAAAAAGCTA
GAGGATCAGCTGCACGCCCTCACCTCGGACGAGTTGTACGAAACCCTCAA
GGAGTACGACGTCCTGCAGGACAAGTTCCACACGGTGCTGCTGTTGCCCA
AGGAATCAAGGCGTGAGGTTACTGCCGGAGGACGAGATGGATCCGCCTAC
GTGCTGCGCTGCCTGAAGATGTGGTACGAGCTGCCCTCCGACGTCCTGTT
CT
BO11122.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11525-PD | 1701 | CycG-RD | 1..886 | 17..902 | 4430 | 100 | Plus |
| CG11525-PA | 1701 | CycG-RA | 1..886 | 17..902 | 4430 | 100 | Plus |
| CG11525-PB | 1701 | CycG-RB | 1..886 | 17..902 | 4430 | 100 | Plus |
| CG11525-PC | 1701 | CycG-RC | 1..886 | 17..902 | 4430 | 100 | Plus |
| CG11525-PE | 849 | CycG-RE | 1..34 | 869..902 | 170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycG-RF | 4450 | CG11525-RF | 119..1004 | 17..902 | 4430 | 100 | Plus |
| CycG-RC | 2687 | CG11525-RC | 517..1402 | 17..902 | 4430 | 100 | Plus |
| CycG-RB | 3132 | CG11525-RB | 962..1847 | 17..902 | 4430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31601416..31602210 | 811..17 | 3975 | 100 | Minus |
| 3R | 32079331 | 3R | 31601261..31601352 | 902..811 | 460 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 23:50:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..7006 | 95..292 | 215 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6861 | 95..225 | 188 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6910 | 95..226 | 173 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2496 | 84..234 | 170 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6840 | 96..225 | 161 | 62.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1146 | 95..168 | 158 | 73 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6889 | 95..226 | 153 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2380 | 94..168 | 150 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6867 | 95..168 | 147 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2392 | 86..165 | 145 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1081..1162 | 84..166 | 142 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1536..1585 | 95..144 | 133 | 74 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6903 | 96..171 | 130 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2853 | 92..158 | 128 | 65.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..6915 | 95..168 | 127 | 63.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2870 | 95..160 | 114 | 63.6 | Plus |
BO11122.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:35 Download gff for
BO11122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-PD | 1..886 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:19:19 Download gff for
BO11122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11525-PC | 1..886 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:29:09 Download gff for
BO11122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 963..1853 | 8..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:17:51 Download gff for
BO11122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 957..1847 | 8..902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:17:51 Download gff for
BO11122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31601261..31601351 | 812..902 | 100 | <- | Minus |
| 3R | 31601416..31602215 | 8..811 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:29:09 Download gff for
BO11122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27426983..27427073 | 812..902 | 100 | <- | Minus |
| arm_3R | 27427138..27427937 | 8..811 | 99 | | Minus |
BO11122.complete Sequence
1732 bp assembled on 2006-12-18
GenBank Submission: FJ632004
> BO11122.complete
GAAGTTATCAGTCGACATGTCTGTCCCTGTACGCTACTCCTCTGCTGCCG
CCGAATACGCCGCCGAAGTTGATTGTGAGTTGGAGAGCACTCTGCAACAG
CAGCAACAGTTGCACTTGCAACAGCAATACGAGCAATACCAGCACTACCA
GTACCAACGGGAGCAGGATATCGCCTACTATTGCCAGTTGCAGGCGGCGC
GGCAGCAGGAGCAGTTGATGCAGCAGAGGACATCGATGTCGTCGTCGGTT
ATGCCAGGCCTAGCCTTGCCCCAGGATCACCAGGACCACCCAGCCGCCCT
TTTGAACGGACCCCACAACAACAACATCGGACTCGCCATGGACGCCCACA
GCATCAACGCCATTCTGGTCGACGACGAGCAGCCCTCGACTTCGGCCCAG
GCTGCCGCCGCTGCTGCCGCATCCGCGGGTGGATCTGCTGGTGCGGGATC
GGGATCGGGATTGGGTGGTGCTATCGGTGGGGGCAAGCTGGCCAACGGCA
TTAACCGCAATGCAGAGATGCCAACTGATTGGATGAGGATTGCGGACGAG
GGCCGGTATGGGACACCGGGTGCTGCTGGCTTGGAATATCAGAAGTACGA
ACAACAACAACAACTGGAGGATCTGGCGGAGTCCGAGGCAGGAGCCGTCG
GTGGAGCCAGCAACAACAACGGCGAATCGTCGTCGTCCTTGAAAAAGCTA
GAGGATCAGCTGCACGCCCTCACCTCGGACGAGTTGTACGAAACCCTCAA
GGAGTACGACGTCCTGCAGGACAAGTTCCACACGGTGCTGCTGTTGCCCA
AGGAATCAAGGCGTGAGGTTACTGCCGGAGGACGAGATGGATCCGCCTAC
GTGCTGCGCTGCCTGAAGATGTGGTACGAGCTGCCCTCCGACGTCCTGTT
CTCGGCCATGAGCCTGGTGGACCGCTTCCTGGATCGCATGGCCGTCAAGC
CGAAGCACATGGCCTGCATGAGCGTGGCCTCGTTCCACTTGGCCATCAAG
CAGCTGGACTTGAAACCCATTCCCGCCGAGGATCTGGTTACAATATCTCA
GTGTGGTTGTACCGCTGGTGATCTGGAACGCATGGCCGGCGTGATTGCCA
ACAAGCTGGGCGTCCAGATGGGACATGCACCGATCACTTCTGTGAGCTAC
CTGCGCATCTACTACGCCCTCTTCCGCAACTTGGCGAAGGAGATCGGCGG
CGACTTTTTCAAGTTCTACCAGCAGCTCATCAAGCTGGAGGAACTGGAGA
ACCGCCTGGAGATCCTGATGTGCGACGTGAAGACCACGGTGATCACGCCC
TCGACGCTGGCGCTGGTGCTCATCTGCCTGCACCTGGACTTCCACATCAA
GGAGTCGTACACCCGCGGCAGTCCGGAGCTGAAGCACGTCTTCGAGTACA
TTCTCTTCCTGCAGCAGTACATGAGGATTCCTGATCGCGTTTTCACCTGC
GGCTTCAGCATCGTTTCGGGTATTCTGTCCCATTACAACGGGCAGAACAA
GGCGCCCTACAAGCAGCGGCTTGTCTGGAAGCTGTCCAGTCGCACGCTGC
GCGTCTTGCGCCCGATCAACCGCTTCTCCTCCGACCTGCCCACCATTGAG
GAAGGCATCCCCAACGCCCTCGACGATGGCCTGCGTTCTAGAACCGAGAG
TATTAGCTCCGAGGAGGAGGAGGACTGGCCCACTTCACCCATAATTCCAA
TTTTCGAACAATGTGCAAGCTTTCTAGACCAT
BO11122.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycG-RF | 1701 | CG11525-PF | 1..1698 | 17..1714 | 8490 | 100 | Plus |
| CycG-RC | 1701 | CG11525-PC | 1..1698 | 17..1714 | 8490 | 100 | Plus |
| CycG-RB | 1701 | CG11525-PB | 1..1698 | 17..1714 | 8490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycG-RF | 4450 | CG11525-RF | 119..1816 | 17..1714 | 8490 | 100 | Plus |
| CycG-RC | 2687 | CG11525-RC | 517..2214 | 17..1714 | 8490 | 100 | Plus |
| CycG-RB | 3132 | CG11525-RB | 962..2659 | 17..1714 | 8490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31601416..31602210 | 811..17 | 3975 | 100 | Minus |
| 3R | 32079331 | 3R | 31600674..31601051 | 1426..1049 | 1890 | 100 | Minus |
| 3R | 32079331 | 3R | 31601112..31601352 | 1051..811 | 1205 | 100 | Minus |
| 3R | 32079331 | 3R | 31600389..31600604 | 1641..1426 | 1080 | 100 | Minus |
| 3R | 32079331 | 3R | 31599276..31599354 | 1714..1636 | 380 | 98.7 | Minus |
Blast to na_te.dros performed 2014-11-27 21:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..7006 | 95..292 | 215 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6861 | 95..225 | 188 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6910 | 95..226 | 173 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2496 | 84..234 | 170 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6840 | 96..225 | 161 | 62.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6889 | 95..226 | 153 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2380 | 94..168 | 150 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6867 | 95..168 | 147 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2392 | 86..165 | 145 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1081..1162 | 84..166 | 142 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1536..1585 | 95..144 | 133 | 74 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6903 | 96..171 | 130 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2853 | 92..158 | 128 | 65.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..6915 | 95..168 | 127 | 63.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2870 | 95..160 | 114 | 63.6 | Plus |
BO11122.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:12:08 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 1..1701 | 17..1715 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:30:24 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 963..2665 | 8..1714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:16:03 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 968..2665 | 17..1716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:12:08 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 963..2665 | 8..1714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:01 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 962..2659 | 17..1716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:01 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31600674..31601048 | 1052..1426 | 100 | <- | Minus |
| 3R | 31601112..31601351 | 812..1051 | 100 | <- | Minus |
| 3R | 31599274..31599348 | 1642..1716 | 97 | <- | Minus |
| 3R | 31600389..31600603 | 1427..1641 | 100 | <- | Minus |
| 3R | 31601416..31602210 | 17..811 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:16:03 Download gff for
BO11122.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27424996..27425070 | 1642..1716 | 97 | <- | Minus |
| arm_3R | 27426111..27426325 | 1427..1641 | 100 | <- | Minus |
| arm_3R | 27426396..27426770 | 1052..1426 | 100 | <- | Minus |
| arm_3R | 27426834..27427073 | 812..1051 | 100 | <- | Minus |
| arm_3R | 27427138..27427932 | 17..811 | 100 | | Minus |
BO11122.pep Sequence
Translation from 16 to 1732
> BO11122.pep
MSVPVRYSSAAAEYAAEVDCELESTLQQQQQLHLQQQYEQYQHYQYQREQ
DIAYYCQLQAARQQEQLMQQRTSMSSSVMPGLALPQDHQDHPAALLNGPH
NNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGGSAGAGSGSGLG
GAIGGGKLANGINRNAEMPTDWMRIADEGRYGTPGAAGLEYQKYEQQQQL
EDLAESEAGAVGGASNNNGESSSSLKKLEDQLHALTSDELYETLKEYDVL
QDKFHTVLLLPKESRREVTAGGRDGSAYVLRCLKMWYELPSDVLFSAMSL
VDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTA
GDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKF
YQQLIKLEELENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTR
GSPELKHVFEYILFLQQYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQ
RLVWKLSSRTLRVLRPINRFSSDLPTIEEGIPNALDDGLRSRTESISSEE
EEDWPTSPIIPIFEQCASFLDH
BO11122.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:31:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycG-PF | 566 | CG11525-PF | 1..566 | 1..566 | 2917 | 100 | Plus |
| CycG-PC | 566 | CG11525-PC | 1..566 | 1..566 | 2917 | 100 | Plus |
| CycG-PB | 566 | CG11525-PB | 1..566 | 1..566 | 2917 | 100 | Plus |
| CycG-PA | 566 | CG11525-PA | 1..566 | 1..566 | 2917 | 100 | Plus |
| CycG-PD | 566 | CG11525-PD | 1..566 | 1..566 | 2917 | 100 | Plus |
