Clone BO11132 Report

Search the DGRC for BO11132

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:111
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG18596-RA
Protein status:BO11132.pep: validated full length
Sequenced Size:3442

Clone Sequence Records

BO11132.3prime Sequence

946 bp (842 high quality bases) assembled on 2006-04-19

> BO11132.3prime
ATGGTCTAGAAAGCTTGCATTTAAGTGCTGCTTACAATATTCCCAAATAA
ATAGTGATCCAGCCACATGTACATTTAGAGAGCGCACTAAGCCATACTGG
GGAATTTCGACGGCGTAGTCCAAGAATCCAATAAGGTTCGCTGGTATTCC
ATGTTTTTCATGCCCCAAAAGAAGAATGCTTTTCTTGGGAAACTTAAAGT
CAACAAAGTTTGTGCTGTGTGCAGTTTGCTCGGCGCCAACGATTTTATAA
CCCTCCATTTGCTTTTCCAGCAGAAATCCAGCAAGCGATTCTGGATTCAC
TTCAAGTATGTTTAAAGTTTTCTCAGCAGTCATGCTCAAGTTTGTAAAAT
CGCTTTTCTCCGCCTGTGATTTTAAACCCAATATTAGGGTATTAACGCCC
AGAACTTCACAGGTACGCGCCAATCCGCCCAGATTTGGCAATTTGTCTAT
GAGCGAGGCCACCACAATGAGTTCGTGGTCATCTCTAGCTTTGTTCGAAA
CAACAAAGTCACTCTCCGGATATATATCTCCGACGGGATTCATTTTTCGC
TGCACATTTCCGTTTAATGCAGCCAAGGACGTTGCAAGCTCAGGTATCAA
AACCGATTGTTTCCGTTTAAACGTTTCAAGGGCGCGCTTTAGTTTCATTC
GAAAGTCATAGGAACAACTAATAAAACTGATGTTTTCATCAAATGGTGCA
TTCGTCATCATCAGAATGCAATCCGAAACGGATGTCGGGCATTGTTTGCC
TAGTTCTGGTAACAAAAGTCGAGCTTCGCACTGAAACTCAGTTAATTTTT
CGCTCAATGTAACCTTGATGGATTTCTTCAATGCATCAGCTATTGGCATT
TGAATGCTTCGATCCTCGCACTCGCTACAAATCCGATGCAAAACAAATGG
GCCAGCAAACGAGTCTGAAAATTTGCTCCCATTGTGAGAGGCACAG

BO11132.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-PA 3411 CG18596-RA 2533..3408 894..19 4380 100 Minus
CG18596-PA 3411 CG18596-RA 2483..2528 943..898 230 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-RA 3665 CG18596-RA 2595..3520 943..19 4590 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22378842..22379365 858..335 2620 100 Minus
3R 32079331 3R 22379432..22379605 336..163 870 100 Minus
3R 32079331 3R 22379665..22379810 164..19 730 100 Minus
3R 32079331 3R 22378693..22378780 943..857 375 97.7 Minus
Blast to na_te.dros performed on 2015-02-12 13:57:45 has no hits.

BO11132.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:51 Download gff for BO11132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-PA 2479..3411 15..946 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:19:42 Download gff for BO11132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-PA 2479..3411 15..946 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 10:38:29 Download gff for BO11132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 2591..3526 11..946 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:12:25 Download gff for BO11132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 2591..3526 11..946 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:12:25 Download gff for BO11132.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 22379434..22379604 164..334 100 -> Minus
3R 22379666..22379816 11..163 97   Minus
3R 22378689..22378780 857..946 96 -> Minus
3R 22378844..22379365 335..856 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 10:38:29 Download gff for BO11132.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18205388..18205538 11..163 97   Minus
arm_3R 18204411..18204502 857..946 96 -> Minus
arm_3R 18204566..18205087 335..856 100 -> Minus
arm_3R 18205156..18205326 164..334 100 -> Minus

BO11132.5prime Sequence

802 bp (792 high quality bases) assembled on 2006-04-19

> BO11132.5prime
GAAGTTATCAGTCGACATGTCATTGCCCACGACCAGAGCCACCACGGCCA
CGACCACTCACGCTGTGGTCCAGGCTGTGGAAACGTATATTCAGAACCAG
AATTTGCTTGGCGAGATCGCTGAGCTGGACGACATGCTGTACGATTTGGT
GTCCATGCACAAAGACAACGAGCTGGCCCTGAAGCGTGTGCTGCAGTGCA
TCCACAACCTGTTGCAGACGAACAGCAAGTATAACGTCCGCTTTGGCCCA
AAAGTTTTTCACAAACTGGTCTCCGTGGTGATTGCCGACAGTCGTGAGGA
TTCGGCCAGCCGGCGTCAACTGGTGGCCAATTTACTGGTCTGCGTGCAGC
TTCATATACGGAAGTTTCCGCGTATCGAAGCCAAGTTCGTGCTGCAGCAG
CTCTGGTCGCTGAGTCAGAGCAATGAGCGGCAACCACATGCGGCCCAGAT
CCTGGTACACCTTTTCGATGATTTCGTCAACAACTTGGGAACGGAATGCG
CCCAGGAACTGCTTGTGCTAACGCGGAATCTTCTACAGTCTGATGTGCGC
GATGATCGACGCTCAGCGTATTTTCTTATGCACAAGCTGCAGGAGATCGA
CGAAGTGCTTGCCGCTCTCCAGTGCAGTGAGGTTCAGTGGAGCGCGTATG
TGGGCATCATGGAGAACCTCGAGGAGCAGCAGTCCCATCTTGTGCTGCCC
ACTTTAAGCACCCTGCTGCCGCGCATGGGCCTGATGTCTAACAATTTGAG
TGAGGATTGGCTGGATTGGCTAAGGATTCTGTGCATACGCCTCCTGGGCG
AC

BO11132.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-PA 3411 CG18596-RA 1..786 17..802 3930 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-RA 3665 CG18596-RA 112..898 16..802 3935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22376034..22376820 16..802 3935 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:00:04 has no hits.

BO11132.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:52 Download gff for BO11132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-PA 1..786 17..802 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:19:43 Download gff for BO11132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-PA 1..786 17..802 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:53:23 Download gff for BO11132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 112..898 16..802 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:00:11 Download gff for BO11132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 112..898 16..802 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:00:11 Download gff for BO11132.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22376034..22376820 16..802 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:53:23 Download gff for BO11132.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18201756..18202542 16..802 100   Plus

BO11132.complete Sequence

3442 bp (3442 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ638680

> BO11132.complete
GAAGTTATCAGTCGACATGTCATTGCCCACGACCAGAGCCACCACGGCCA
CGACCACTCACGCTGTGGTCCAGGCTGTGGAAACGTATATTCAGAACCAG
AATTTGCTTGGCGAGATCGCTGAGCTGGACGACATGCTGTACGATTTGGT
GTCCATGCACAAAGACAACGAGCTGGCCCTGAAGCGTGTGCTGCAGTGCA
TCCACAACCTGTTGCAGACGAACAGCAAGTATAACGTCCGCTTTGGCCCA
AAAGTTTTTCACAAACTGGTCTCCGTGGTGATTGCCGACAGTCGTGAGGA
TTCGGCCAGCCGGCGTCAACTGGTGGCCAATTTACTGGTCTGCGTGCAGC
TTCATATACGGAAGTTTCCGCGTATCGAAGCCAAGTTCGTGCTGCAGCAG
CTCTGGTCGCTGAGTCAGAGCAATGAGCGGCAACCACATGCGGCCCAGAT
CCTGGTACACCTTTTCGATGATTTCGTCAACAACTTGGGAACGGAATGCG
CCCAGGAACTGCTTGTGCTAACGCGGAATCTTCTACAGTCTGATGTGCGC
GATGATCGACGCTCAGCGTATTTTCTTATGCACAAGCTGCAGGAGATCGA
CGAAGTGCTTGCCGCTCTCCAGTGCAGTGAGGTTCAGTGGAGCGCGTATG
TGGGCATCATGGAGAACCTCGAGGAGCAGCAGTCCCATCTTGTGCTGCCC
ACTTTAAGCACCCTGCTGCCGCGCATGGGCCTGATGTCTAACAATTTGAG
TGAGGATTGGCTGGATTGGCTAAGGATTCTGTGCATACGCCTCCTGGGCG
ACAACAACATCCTCGTGTTGCGCTGGACCCTGAAGTACTTCCTATCCCAT
TTTAGCCTAGAACAGATATCGCGTTTCAATCTTCTAACACAATTCCTTGC
TGCTACCAATCGGACGCAATTGTACAATCCAGAGGTGCCCGATTGCCTCA
CTAAGCAGCAAATAACTGATTTTAGTGCACAATTCCCGGCAGAGATATTG
CTGGAAGCGCTTGTCTGCGTTCCGTGGCATGCAGTTCCCCTGATCCACTG
GCTTCAAGCATGGGAGCTAAAGCAGCTGCCGGTGGTTTCCAAGGAGCTGC
TGTTTAAGTTGGGCGCTCGCGTTCGTTCCCTCCAAAATCCGGTTTTGCGT
GGTGAAGCCATCAATTATGTGATTTTCTCCTTAAGTGCGACGATTGACAG
CCTGTCATTGGGAGATTACCTCCTCTTCATGGAGTCTTTGTACAATACCA
TCGACCGGTATCAATCTCATTCACAACTAGCACAGAAAATAAGAAATTGC
AGCAATTTAGAAAAACATATTGCTAGTTTCAACATTCGTTGCTGTGAACT
TGTATCTCAAATGGACTATAAACACGATGTATTTGTTGCGTTCTTGGAGA
AATTACGAACAGTTCCAAAATCCAAACATGGCTGGTGGCGACTTTTACCC
ATATTTCTGCATCGGGAACTGGATCATCCAGAACAGTATTTAGATTTCTA
TCGCTCTGTCTATGATTTAGATACATCTTTTCTTGAAAGTGGTGTGAGTC
TAGAGCAGATGCAGCAGCACCTTCTTAATCGATTGGATTGCCAGACCAGA
GAAGAGAAGTCCTTTGTGCTCGAGCACTCTGTGGATCTTTTCGTACAGAT
AAATCTTCCAACGTGGAGCAAGTTAGAAGTACTTAACCTAAATCCCCTGG
AACTTTTGGATCGGGGTACTGAAGAAACATTTGCCACCTTGTCGAATATA
TTGTCCACGCATGATGAACAATTGGCTGACCAAAATGTATTGCCCGCCTT
TATATCCCGTTTGGGAAAACTAAAGGTCAGGGAAACACAAGCCATCCTAA
AATATGCAGTGCAAAATCTTTCGTCAGAAGAGTATGAAAAGTGCGTAGTG
GACGTTTTGGAGAAAAACACCTTTCTTTTGGGTACAATGGACTGTGAAGA
ATATATTAAGGCACCCACCTCGTTTGTTATAAAAAGAATGCTGCAGGGAG
AAACCACTACTGGCGATGCACGCATTGAACGCGCATTTGAGCAAATCTCG
GATACTGGAGCCATGGATCGTGTGCAATTTATTCAATATGCGAAGAACAG
CACTGGTTTGGATATCAGCTTCATCTGTGACGATTTGCTTAGAATGAACA
ATGAGCTGTCCAGAAAAAAACCACGCTATTTTGCAAACTGCAAAGAGCAC
AGAATGAAAATGCGAATAGGCAAAGCTTTGCTCGACCTAAGCGACAGATG
GAAGTGGTCGGACAACCTGTGGGAAGCCGTCTTGTGCCCTAGCGATCAGC
CTAACATTAGCTTTATGTACGAGTACCTTGTCTCCAAAATGCTGCCAAGC
ATCGATCTATTGCTGGAGCAGTTAAAGCTACTGGCAACTCTAAAACCGAG
CCAGCAAATTTCGCTTGTCTCTGTAGTCCACATATACTGCTTGACTCGCT
GGGAAAGCATACAACATGAACAGCTTGTCGAAGTATTTGCCGTCCTGTTG
CCTCTCACAATGGGAGCAAATTTTCAGACTCGTTTGCTGGCCCAATTGGT
TTTGCATCGGATTTGTAGCGAGTGCGAGGATCGAAGCATTCAAATGCCAA
TAGCTGATGCATTGAAGAAATCCATCAAGGTTACATTGAGCGAAAAATTA
ACTGAGTTTCAGTGCGAAGCTCGACTTTTGTTACCAGAACTAGGCAAACA
ATGCCCGACATCCGTTTCGGATTGCATTCTGATGATGACGAATGCACCAT
TTGATGAAAACATCAGTTTTATTAGTTGTTCCTATGACTTTCGAATGAAA
CTAAAGCGCGCCCTTGAAACGTTTAAACGGAAACAATCGGTTTTGATACC
TGAGCTTGCAACGTCCTTGGCTGCATTAAACGGAAATGTGCAGCGAAAAA
TGAATCCCGTCGGAGATATATATCCGGAGAGTGACTTTGTTGTTTCGAAC
AAAGCTAGAGATGACCACGAACTCATTGTGGTGGCCTCGCTCATAGACAA
ATTGCCAAATCTGGGCGGATTGGCGCGTACCTGTGAAGTTCTGGGCGTTA
ATACCCTAATATTGGGTTTAAAATCACAGGCGGAGAAAAGCGATTTTACA
AACTTGAGCATGACTGCTGAGAAAACTTTAAACATACTTGAAGTGAATCC
AGAATCGCTTGCTGGATTTCTGCTGGAAAAGCAAATGGAGGGTTATAAAA
TCGTTGGCGCCGAGCAAACTGCACACAGCACAAACTTTGTTGACTTTAAG
TTTCCCAAGAAAAGCATTCTTCTTTTGGGGCATGAAAAACATGGAATACC
AGCGAACCTTATTGGATTCTTGGACTACGCCGTCGAAATTCCCCAGTATG
GCTTAGTGCGCTCTCTAAATGTACATGTGGCTGGATCACTATTTATTTGG
GAATATTGTAAGCAGCACTTAAATGCAAGCTTTCTAGACCAT

BO11132.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-RA 3411 CG18596-PA 1..3408 17..3424 17040 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-RA 3665 CG18596-RA 112..3520 16..3424 17045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22376034..22377205 16..1187 5860 100 Plus
3R 32079331 3R 22377261..22377910 1187..1836 3250 100 Plus
3R 32079331 3R 22378216..22378780 2022..2586 2825 100 Plus
3R 32079331 3R 22378842..22379365 2585..3108 2620 100 Plus
3R 32079331 3R 22377969..22378154 1837..2022 930 100 Plus
3R 32079331 3R 22379432..22379605 3107..3280 870 100 Plus
3R 32079331 3R 22379665..22379810 3279..3424 730 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:20:35 has no hits.

BO11132.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:12 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 1..3411 17..3428 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:11:58 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 90..3504 16..3432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:54:51 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 113..3520 17..3426 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:12 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 90..3504 16..3432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:58:11 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
CG18596-RA 113..3520 17..3426 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:58:11 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22379434..22379604 3109..3279 100 -> Plus
3R 22379666..22379810 3280..3426 98   Plus
3R 22376035..22377204 17..1186 100 -> Plus
3R 22377261..22377910 1187..1836 100 -> Plus
3R 22377969..22378154 1837..2022 100 -> Plus
3R 22378217..22378780 2023..2586 100 -> Plus
3R 22378844..22379365 2587..3108 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:51 Download gff for BO11132.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18205156..18205326 3109..3279 100 -> Plus
arm_3R 18205388..18205532 3280..3426 98   Plus
arm_3R 18201757..18202926 17..1186 100 -> Plus
arm_3R 18202983..18203632 1187..1836 100 -> Plus
arm_3R 18203691..18203876 1837..2022 100 -> Plus
arm_3R 18203939..18204502 2023..2586 100 -> Plus
arm_3R 18204566..18205087 2587..3108 100 -> Plus

BO11132.pep Sequence

Translation from 16 to 3442

> BO11132.pep
MSLPTTRATTATTTHAVVQAVETYIQNQNLLGEIAELDDMLYDLVSMHKD
NELALKRVLQCIHNLLQTNSKYNVRFGPKVFHKLVSVVIADSREDSASRR
QLVANLLVCVQLHIRKFPRIEAKFVLQQLWSLSQSNERQPHAAQILVHLF
DDFVNNLGTECAQELLVLTRNLLQSDVRDDRRSAYFLMHKLQEIDEVLAA
LQCSEVQWSAYVGIMENLEEQQSHLVLPTLSTLLPRMGLMSNNLSEDWLD
WLRILCIRLLGDNNILVLRWTLKYFLSHFSLEQISRFNLLTQFLAATNRT
QLYNPEVPDCLTKQQITDFSAQFPAEILLEALVCVPWHAVPLIHWLQAWE
LKQLPVVSKELLFKLGARVRSLQNPVLRGEAINYVIFSLSATIDSLSLGD
YLLFMESLYNTIDRYQSHSQLAQKIRNCSNLEKHIASFNIRCCELVSQMD
YKHDVFVAFLEKLRTVPKSKHGWWRLLPIFLHRELDHPEQYLDFYRSVYD
LDTSFLESGVSLEQMQQHLLNRLDCQTREEKSFVLEHSVDLFVQINLPTW
SKLEVLNLNPLELLDRGTEETFATLSNILSTHDEQLADQNVLPAFISRLG
KLKVRETQAILKYAVQNLSSEEYEKCVVDVLEKNTFLLGTMDCEEYIKAP
TSFVIKRMLQGETTTGDARIERAFEQISDTGAMDRVQFIQYAKNSTGLDI
SFICDDLLRMNNELSRKKPRYFANCKEHRMKMRIGKALLDLSDRWKWSDN
LWEAVLCPSDQPNISFMYEYLVSKMLPSIDLLLEQLKLLATLKPSQQISL
VSVVHIYCLTRWESIQHEQLVEVFAVLLPLTMGANFQTRLLAQLVLHRIC
SECEDRSIQMPIADALKKSIKVTLSEKLTEFQCEARLLLPELGKQCPTSV
SDCILMMTNAPFDENISFISCSYDFRMKLKRALETFKRKQSVLIPELATS
LAALNGNVQRKMNPVGDIYPESDFVVSNKARDDHELIVVASLIDKLPNLG
GLARTCEVLGVNTLILGLKSQAEKSDFTNLSMTAEKTLNILEVNPESLAG
FLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANLIG
FLDYAVEIPQYGLVRSLNVHVAGSLFIWEYCKQHLNASFLDH

BO11132.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG18596-PA 1136 CG18596-PA 1..1136 1..1136 5836 100 Plus