Clone Sequence Records
BO11172.3prime Sequence
855 bp (751 high quality bases) assembled on 2006-04-19
> BO11172.3prime
ATGGTCTAGAAAGCTTGCGGAGTAGAGCGTCAGCACGGGCGTCTGGTTGC
CGCGCGCCAATGCCACCGGACACTTCATGTCCGACGTGAGCATCTCCAGC
CATGACATGTACAGCGGTGCCGAGATGGCCTCCTTGCGCGGCATGGGCAG
GGACATGACCACCAGGGAAGCGTTTGATGAGTGCTTGACCACCAGCTCAT
GGATGCGCAGCTGGCGATTCGTCTTCTCCGACATGCTCTGCAGCTCATCG
TCCGTGATGCCGAACTCGTTGCGGGCTCCGCGGCGGAAGGGCTCGATCAG
CCGCTTGTGCTTCAGCACCGTGTCCGCCCGCGGCTGCTCGGAGACGCCCT
TCAGCATAATGAGCTCAGAGTACTTGATGCGGAACTTGGTCAACAAGCTA
GCCATGCTCTTCTCTTCCTGCTCCTCGTCTTTTCCGTGGCACATTGCGAA
CACCCTTAGCTTGGAGTTCTGCCAGTGGGAGCGCATGGAGATTATGTAGG
GCAGGAGAATTGTGAGACCTCCGTCGTCGTACAGCCAGAAGACATCGATT
GTGCCCTTGGGCTGTTTGCGCGTGAATATGGTCATGGCGTCCAGCAAGTT
TTGGGGTATGTCCGATCCGCCCTTGGTGTGGTAGGTGACGGCGGGCTCAT
CCGAGCTGGTCACCTTGTAGCTGCGGGAGTTGCGCTGCATGTTGGGCATC
GGTGCTGGCTGGGGCATTGTGAAAGAGGAGTTGGGGCTGTCCATGCTGGC
TAGGTTCAGGTTGGAGTCAATGTGCAGCAGCTCCGAGGCTGCATTGGCCG
CCGGCATCAGTTCGTTGGTGAATCCATGCGCATTGGCGGTATGCATGTGA
CCCAT
BO11172.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:18:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-PB | 3207 | CG31547-RB | 2368..3204 | 855..19 | 4185 | 100 | Minus |
| CG31547-PA | 2988 | CG31547-RA | 2149..2985 | 855..19 | 4185 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-RA | 3297 | CG31547-RA | 2180..3016 | 855..19 | 4185 | 100 | Minus |
| CG31547-RB | 3891 | CG31547-RB | 2774..3610 | 855..19 | 4185 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:42:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5490700..5491038 | 517..855 | 1695 | 100 | Plus |
| 3R | 32079331 | 3R | 5489969..5490245 | 132..408 | 1385 | 100 | Plus |
| 3R | 32079331 | 3R | 5489786..5489901 | 19..134 | 580 | 100 | Plus |
| 3R | 32079331 | 3R | 5490526..5490639 | 407..520 | 570 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 11:42:17 has no hits.
BO11172.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:00:05 Download gff for
BO11172.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-PB | 2368..3207 | 18..855 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:21:22 Download gff for
BO11172.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-PA | 2149..2988 | 18..855 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:59:37 Download gff for
BO11172.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 2774..3610 | 19..855 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:58:21 Download gff for
BO11172.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 2774..3610 | 19..855 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:58:21 Download gff for
BO11172.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5490702..5491038 | 519..855 | 100 | | Plus |
| 3R | 5489786..5489899 | 19..132 | 100 | <- | Plus |
| 3R | 5489970..5490243 | 133..406 | 100 | <- | Plus |
| 3R | 5490526..5490637 | 407..518 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:59:37 Download gff for
BO11172.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1315508..1315621 | 19..132 | 100 | <- | Plus |
| arm_3R | 1315692..1315965 | 133..406 | 100 | <- | Plus |
| arm_3R | 1316248..1316359 | 407..518 | 100 | <- | Plus |
| arm_3R | 1316424..1316760 | 519..855 | 100 | | Plus |
BO11172.5prime Sequence
866 bp (857 high quality bases) assembled on 2006-04-19
> BO11172.5prime
GAAGTTATCAGTCGACATGGCCGATCGCTTCCAGATCTCAAAGGTGAACG
GCACCGCGAACGCCGGCTACGATGGCGAGGCTAGATCAGCTGAATCCGAC
CAGACGGACGCAGCCCACCCACTTCCGCCCACCAGCAACGAAAACCACCT
GCATCCCAAGGCTTCGGGGGAGACGGGCGAGAACCGCCGCAGCTCCCGGC
TCTCCTTCCGCGGATTCGGTAACTTCCTGCGCAAATCGGACGCCGAGCGC
AAGTTTAGTCTCGCCCAGCTAACAAAGGAGAGTCTGCCGCGCCTGGACAA
CTACCGCATTTCCATGCGCAACCTCAAGCGTCCTTCTATCGGCGAACTTC
AAGGAGAGGCGGTCGACCAGAGCATCACTATTCCCGAACCCGAACCGGAG
GCAACTGGCGGACACATCAAGCTAGGATGGATCGTGGGCGTGCTGATACC
TTGCCTTCTCAACATCTGGGGCGTAATGCTCTTCCTGCGCCTCAGCTGGG
TGGTGGCCGAGTCGGGCATCCTGCAGTCCCTGATTATAATTACGATCTCC
GCGGTGGTCTGCGTCATCACGACGCTCTCGCTGTCGGCCATTAGCACCAA
CGGCGAGGTCAAGGGCGGCGGCGTCTACTTCATCATATCCCGTTCGCTGG
GCCCCGAGTTTGGGGCGTCGGTGGGCGTGGTCTTCGCCTTCGCCAACGCC
GTCTCAGCCTCGATGAACACCATCGGCTTCTGCGAATCGCTAAATGTTTT
ACTCAAGAACAACGACCTGAAGATTGTCGACAACGGGATCAATGACATCC
GGATCGTGGGATCGATAACCGTGCTGGTGCTCATCCTAATCTGCTGCGTG
GGTATGGAGTGGGAGA
BO11172.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-PB | 3207 | CG31547-RB | 1..850 | 17..866 | 4250 | 100 | Plus |
| CG31547-PA | 2988 | CG31547-RA | 41..631 | 276..866 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-RB | 3891 | CG31547-RB | 406..1256 | 16..866 | 4255 | 100 | Plus |
| CG31547-RA | 3297 | CG31547-RA | 72..662 | 276..866 | 2955 | 100 | Plus |
| Ncc69-RG | 4762 | CG4357-RG | 1843..1897 | 452..506 | 185 | 89.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5493105..5493492 | 755..368 | 1940 | 100 | Minus |
| 3R | 32079331 | 3R | 5502036..5502297 | 277..16 | 1310 | 100 | Minus |
| 3R | 32079331 | 3R | 5492777..5492887 | 866..756 | 555 | 100 | Minus |
| 3R | 32079331 | 3R | 5498777..5498870 | 370..277 | 470 | 100 | Minus |
| 3L | 28110227 | 3L | 12374399..12374453 | 506..452 | 185 | 89.1 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:39:01 has no hits.
BO11172.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:00:06 Download gff for
BO11172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-PB | 1..849 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:21:23 Download gff for
BO11172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-PB | 1..849 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:47:55 Download gff for
BO11172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 401..1255 | 9..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:04:58 Download gff for
BO11172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 401..1255 | 9..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:04:58 Download gff for
BO11172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5492778..5492887 | 756..865 | 100 | <- | Minus |
| 3R | 5493105..5493489 | 371..755 | 100 | <- | Minus |
| 3R | 5498777..5498870 | 277..370 | 100 | <- | Minus |
| 3R | 5502037..5502300 | 9..276 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:47:55 Download gff for
BO11172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1318500..1318609 | 756..865 | 100 | <- | Minus |
| arm_3R | 1318827..1319211 | 371..755 | 100 | <- | Minus |
| arm_3R | 1324499..1324592 | 277..370 | 100 | <- | Minus |
| arm_3R | 1327759..1328022 | 9..276 | 98 | | Minus |
BO11172.complete Sequence
3238 bp (3238 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ632019
> BO11172.complete
GAAGTTATCAGTCGACATGGCCGATCGCTTCCAGATCTCAAAGGTGAACG
GCACCGCGAACGCCGGCTACGATGGCGAGGCTAGATCAGCTGAATCCGAC
CAGACGGACGCAGCCCACCCACTTCCGCCCACCAGCAACGAAAACCACCT
GCATCCCAAGGCTTCGGGGGAGACGGGCGAGAACCGCCGCAGCTCCCGGC
TCTCCTTCCGCGGATTCGGTAACTTCCTGCGCAAATCGGACGCCGAGCGC
AAGTTTAGTCTCGCCCAGCTAACAAAGGAGAGTCTGCCGCGCCTGGACAA
CTACCGCATTTCCATGCGCAACCTCAAGCGTCCTTCTATCGGCGAACTTC
AAGGAGAGGCGGTCGACCAGAGCATCACTATTCCCGAACCCGAACCGGAG
GCAACTGGCGGACACATCAAGCTAGGATGGATCGTGGGCGTGCTGATACC
TTGCCTTCTCAACATCTGGGGCGTAATGCTCTTCCTGCGCCTCAGCTGGG
TGGTGGCCGAGTCGGGCATCCTGCAGTCCCTGATTATAATTACGATCTCC
GCGGTGGTCTGCGTCATCACGACGCTCTCGCTGTCGGCCATTAGCACCAA
CGGCGAGGTCAAGGGCGGCGGCGTCTACTTCATCATATCCCGTTCGCTGG
GCCCCGAGTTTGGGGCGTCGGTGGGCGTGGTCTTCGCCTTCGCCAACGCC
GTCTCAGCCTCGATGAACACCATCGGCTTCTGCGAATCGCTAAATGTTTT
ACTCAAGAACAACGACCTGAAGATTGTCGACAACGGGATCAATGACATCC
GGATCGTGGGATCGATAACCGTGCTGGTGCTCATCCTAATCTGCTGCGTG
GGTATGGAGTGGGAGACGAAGGCGCAGAACTTCCTGATCGTCACGATTGT
CCTGGCCATCTTCAATTTCCTGATCGGAGCTGCCATTGGACCCCAGGGTA
ATGAGGAGCAAATCTCTAGGGGTTTCGTCGGCTTTTCATGGGCTACTTTG
AAGGAGAACTTCGGATCGGACTATCGCTATGCGGAGGGCGTAAACCACGA
CTTTTTCAGCGTGTTCGCTATCTTCTTTCCCAGCGTGACGGGCATCCAGG
CAGGAGCAAATATCTGCGGAGACCTCAAGGATGCCGGAGCTGCTATACCG
AAGGGCACCTTCTGGTCCCTGCTCATCTCGATGTCCTCATACGCTCTCTT
TGTCCTCTTCGCCGGTGGCGCTGCTGTAAGAGATGCCTCCGGTATACCAG
CTGACCTCGTCAATGGCACCATTGTTTCCTCGGAGCTGCCGTGCATGGCC
ACGGGCAACTGCACCTGGGGTCTCTTCAACTCGTACGAAATGATGCAGGA
GATGTCGCTGTGGGGACCACTCATCTACGCCGGCTGCTTTGCAGCCACGT
TAAGCACGGCCCTGACCAACTTGCTTTCCGTTCCCAGGCTGGTGCAGGCC
CTGGGCATTGACCAGATCTACCCGGGTCTAATCTTCTTCTCGAAGCCGTA
CGGCAAGCACGGCGAACCGTATCGCGGCTACGTGCTCACCTTCTTCATCA
CCACCGGCTTCCTGCTGATCGGAGAGCTTAACCTGATCGCTCCTCTGATC
TCCACCTTCTACCTGGCCTCCTACGCCCTCATCAACTTTTGCACATTCCA
CGCGGCCTTCGTGAAGCCATTGGGATGGCGACCCACCTTTAAGTACTACA
ACGCCTGGCTCAGCCTCTTCGGGTTCGCCATGTGCGTGGCCATCATGTTC
CTGATCAACTACGTGGCCGCCATCATCACCTTTGGCATCATCTTCGCCCT
CTATCTGGTGGTCATGTACCGCAAGCCGGAGGCCAACTGGGGATCCACCA
CGCAGGCTCAGCAGTACAAGGCTGCTCTAATGGCCGTCCACCGACTGCAG
AACGTCTCGGATCACGTCAAGAACTACCATCCCCAGGTGCTGGTGCTCTC
CGGCGATCCCAAGACCAGACCGCCACTCGTGGACTTTGGCTACCTGCTGA
CCAAGAACAACTCCCTCATGTTCGTGGCAAATATAATACCGGTGCGGGTG
GGCTACAAGAACCGGCAGCACCTGGTGAAGGATGGACAAAAGTACCTGGA
TGCCCGCAAGATCAAGGCCTTCTACAATGTGATTGATGGGTTCAGCCTGG
AGGACGGAATAAATGCGTTGACAAAGTCAACGGGCTTCGGCAAAATGTCT
CCGAACATTGTGCTGGTGGGCTACAAGCCGGACTGGAATCGCTGTCGCAA
GGAGGAGGTGGAGAGTTACTTTTCCATTTTGTACAATGCTTTTTCTCAGC
GTATGGGCGTGGCCCTGCTCCGACTGCCCAACGGATTGGATTTCTCTGAG
CTGAGTTCCGAGGTCACTCTGCCGGCCAACGGAATGGGTCACATGCATAC
CGCCAATGCGCATGGATTCACCAACGAACTGATGCCGGCGGCCAATGCAG
CCTCGGAGCTGCTGCACATTGACTCCAACCTGAACCTAGCCAGCATGGAC
AGCCCCAACTCCTCTTTCACAATGCCCCAGCCAGCACCGATGCCCAACAT
GCAGCGCAACTCCCGCAGCTACAAGGTGACCAGCTCGGATGAGCCCGCCG
TCACCTACCACACCAAGGGCGGATCGGACATACCCCAAAACTTGCTGGAC
GCCATGACCATATTCACGCGCAAACAGCCCAAGGGCACAATCGATGTCTT
CTGGCTGTACGACGACGGAGGTCTCACAATTCTCCTGCCCTACATAATCT
CCATGCGCTCCCACTGGCAGAACTCCAAGCTAAGGGTGTTCGCAATGTGC
CACGGAAAAGACGAGGAGCAGGAAGAGAAGAGCATGGCTAGCTTGTTGAC
CAAGTTCCGCATCAAGTACTCTGAGCTCATTATGCTGAAGGGCGTCTCCG
AGCAGCCGCGGGCGGACACGGTGCTGAAGCACAAGCGGCTGATCGAGCCC
TTCCGCCGCGGAGCCCGCAACGAGTTCGGCATCACGGACGATGAGCTGCA
GAGCATGTCGGAGAAGACGAATCGCCAGCTGCGCATCCATGAGCTGGTGG
TCAAGCACTCATCAAACGCTTCCCTGGTGGTCATGTCCCTGCCCATGCCG
CGCAAGGAGGCCATCTCGGCACCGCTGTACATGTCATGGCTGGAGATGCT
CACGTCGGACATGAAGTGTCCGGTGGCATTGGCGCGCGGCAACCAGACGC
CCGTGCTGACGCTCTACTCCGCAAGCTTTCTAGACCAT
BO11172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-RB | 3207 | CG31547-PB | 1..3204 | 17..3220 | 16020 | 100 | Plus |
| CG31547-RA | 2988 | CG31547-PA | 41..2985 | 276..3220 | 14725 | 100 | Plus |
| Ncc69-RG | 3516 | CG4357-PG | 664..718 | 452..506 | 185 | 89.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-RB | 3891 | CG31547-RB | 406..3610 | 16..3220 | 16025 | 100 | Plus |
| CG31547-RA | 3297 | CG31547-RA | 72..3016 | 276..3220 | 14725 | 100 | Plus |
| Ncc69-RG | 4762 | CG4357-RG | 1843..1897 | 452..506 | 185 | 89.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:27:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5491542..5492595 | 2043..990 | 5270 | 100 | Minus |
| 3R | 32079331 | 3R | 5490700..5491138 | 2722..2284 | 2195 | 100 | Minus |
| 3R | 32079331 | 3R | 5493105..5493492 | 755..368 | 1940 | 100 | Minus |
| 3R | 32079331 | 3R | 5489969..5490245 | 3107..2831 | 1385 | 100 | Minus |
| 3R | 32079331 | 3R | 5502036..5502297 | 277..16 | 1310 | 100 | Minus |
| 3R | 32079331 | 3R | 5491198..5491440 | 2283..2041 | 1215 | 100 | Minus |
| 3R | 32079331 | 3R | 5492653..5492887 | 990..756 | 1175 | 100 | Minus |
| 3R | 32079331 | 3R | 5489786..5489901 | 3220..3105 | 580 | 100 | Minus |
| 3R | 32079331 | 3R | 5490526..5490639 | 2832..2719 | 570 | 100 | Minus |
| 3R | 32079331 | 3R | 5498777..5498870 | 370..277 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:27:43 has no hits.
BO11172.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:08 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 1..3207 | 17..3221 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:20 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 407..3610 | 17..3222 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:48 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 407..3610 | 17..3222 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:08 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 401..3610 | 9..3220 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:41 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31547-RB | 407..3610 | 17..3222 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:41 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5493105..5493489 | 371..755 | 100 | <- | Minus |
| 3R | 5498777..5498870 | 277..370 | 100 | <- | Minus |
| 3R | 5492654..5492887 | 756..989 | 100 | <- | Minus |
| 3R | 5489784..5489899 | 3107..3222 | 98 | <- | Minus |
| 3R | 5489970..5490243 | 2833..3106 | 100 | <- | Minus |
| 3R | 5490526..5490637 | 2721..2832 | 100 | <- | Minus |
| 3R | 5490702..5491138 | 2284..2720 | 100 | <- | Minus |
| 3R | 5491198..5491439 | 2042..2283 | 100 | <- | Minus |
| 3R | 5491544..5492595 | 990..2041 | 100 | <- | Minus |
| 3R | 5502037..5502296 | 17..276 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:48 Download gff for
BO11172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1315506..1315621 | 3107..3222 | 98 | <- | Minus |
| arm_3R | 1315692..1315965 | 2833..3106 | 100 | <- | Minus |
| arm_3R | 1316248..1316359 | 2721..2832 | 100 | <- | Minus |
| arm_3R | 1316424..1316860 | 2284..2720 | 100 | <- | Minus |
| arm_3R | 1316920..1317161 | 2042..2283 | 100 | <- | Minus |
| arm_3R | 1317266..1318317 | 990..2041 | 100 | <- | Minus |
| arm_3R | 1318376..1318609 | 756..989 | 100 | <- | Minus |
| arm_3R | 1318827..1319211 | 371..755 | 100 | <- | Minus |
| arm_3R | 1324499..1324592 | 277..370 | 100 | <- | Minus |
| arm_3R | 1327759..1328018 | 17..276 | 100 | | Minus |
BO11172.pep Sequence
Translation from 16 to 3238
> BO11172.pep
MADRFQISKVNGTANAGYDGEARSAESDQTDAAHPLPPTSNENHLHPKAS
GETGENRRSSRLSFRGFGNFLRKSDAERKFSLAQLTKESLPRLDNYRISM
RNLKRPSIGELQGEAVDQSITIPEPEPEATGGHIKLGWIVGVLIPCLLNI
WGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKG
GGVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNVLLKNND
LKIVDNGINDIRIVGSITVLVLILICCVGMEWETKAQNFLIVTIVLAIFN
FLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVF
AIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAG
GAAVRDASGIPADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQEMSLWG
PLIYAGCFAATLSTALTNLLSVPRLVQALGIDQIYPGLIFFSKPYGKHGE
PYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAAFVK
PLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVM
YRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKT
RPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQHLVKDGQKYLDARKIK
AFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVES
YFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTANAHG
FTNELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSR
SYKVTSSDEPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTIDVFWLYDD
GGLTILLPYIISMRSHWQNSKLRVFAMCHGKDEEQEEKSMASLLTKFRIK
YSELIMLKGVSEQPRADTVLKHKRLIEPFRRGARNEFGITDDELQSMSEK
TNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSDMK
CPVALARGNQTPVLTLYSASFLDH
BO11172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31547-PB | 1068 | CG31547-PB | 1..1068 | 1..1068 | 5528 | 100 | Plus |
| CG31547-PA | 995 | CG31547-PA | 14..995 | 87..1068 | 5080 | 99.9 | Plus |
| Ncc69-PG | 1171 | CG4357-PG | 150..1171 | 81..1068 | 2423 | 48.1 | Plus |
| Ncc69-PA | 1171 | CG4357-PA | 150..1171 | 81..1068 | 2423 | 48.1 | Plus |
| Ncc69-PF | 1191 | CG4357-PF | 150..1191 | 81..1068 | 2413 | 46.8 | Plus |
