Clone Sequence Records
BO11214.3prime Sequence
792 bp (707 high quality bases) assembled on 2006-04-19
> BO11214.3prime
ATGGTCTAGAAAGCTTGCCTCCTGCCACTCGTTCTCATCCACACCCTCCA
TGTCGTCCTGCTCCAGCTTGGTGGTGAATTCCATGCGCGCGCTAACCGAT
TTCTGGATCTCCTGCTGTTTGTTGATCTCGTACTCGGACTTCTGGCCACC
GAACTGGGGATGATCTGGCTTCTTGACGGGCTGCGCTGGCACTTGCTGTA
TGGAAGATAAAGTTTCCATGCCCTCGGGCTTGAGGCTGACTTTGGGTGCC
GCCTTATCATTGCTAGCGAACCAATCCTCGGAGCTCAGTGTGGCGCTCCA
GGTGATGCGTGTGGGTGGGAACAGATCGTCTTGGAACAGCTCGCTCTTGA
TGCGGGGCACTGTGAAACTCAGGGGTTCAATTGTGGTATTGGTTAGCCGA
TAGGCCTTTGAGAACTCCACGCTGGCCACGTCGCAGTGGTTCTTGGTGAG
GAAACTGAGGCCCTGGTGCAGCGAGGTGCAACGATGGTGCGACAGTGGGC
AGATGTACGGCTCCTCGTCGGTGATTTCGTAACAGTAGATTGTGGAGTCA
CCCTTGCCCGTAACAAACAGTGTGGAGCTATCTTCGTCATAGAATGGAAT
CAGTATGGAGGGTGAGACATCCAAACTGGCAGTGTTCAATGGGGCGGACA
ACTTTTGTGCATTGTACACGCTGATCTGTCGCTCCGAAACCTTGTCAAAA
CCAGTGCAGACGATGTAATGTCCCTCCAACGCCCAGGTGATCCGAGCTCC
ACGAGTACCGACCGGTCCATTGCCCTCCCGTATGGGTGTCTC
BO11214.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:19:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4532-PE | 3225 | pod1-RE | 2449..3222 | 792..19 | 3870 | 100 | Minus |
CG4532-PA | 3225 | pod1-RA | 2449..3222 | 792..19 | 3870 | 100 | Minus |
CG4532-PB | 3225 | pod1-RB | 2449..3222 | 792..19 | 3870 | 100 | Minus |
CG4532-PC | 3225 | pod1-RC | 2449..3222 | 792..19 | 3870 | 100 | Minus |
CG4532-PD | 3225 | pod1-RD | 2449..3222 | 792..19 | 3870 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:46:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RG | 6374 | CG4532-RG | 3340..4113 | 792..19 | 3870 | 100 | Minus |
pod1-RF | 6031 | CG4532-RF | 3307..4080 | 792..19 | 3870 | 100 | Minus |
pod1-RD | 5837 | CG4532-RD | 2803..3576 | 792..19 | 3870 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:46:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6810702..6811047 | 691..346 | 1730 | 100 | Minus |
X | 23542271 | X | 6811115..6811252 | 347..210 | 690 | 100 | Minus |
X | 23542271 | X | 6810538..6810639 | 792..691 | 510 | 100 | Minus |
X | 23542271 | X | 6811317..6811417 | 209..109 | 505 | 100 | Minus |
X | 23542271 | X | 6811478..6811569 | 110..19 | 460 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:46:53 has no hits.
BO11214.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:01:08 Download gff for
BO11214.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-PD | 2449..3225 | 18..792 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:22:52 Download gff for
BO11214.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4532-PD | 2449..3225 | 18..792 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 23:16:52 Download gff for
BO11214.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 2803..3580 | 13..792 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:03:46 Download gff for
BO11214.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 2803..3580 | 13..792 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:03:46 Download gff for
BO11214.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6810702..6811047 | 346..691 | 100 | -> | Minus |
X | 6811117..6811252 | 210..345 | 100 | -> | Minus |
X | 6811317..6811417 | 109..209 | 100 | -> | Minus |
X | 6811480..6811573 | 13..108 | 96 | | Minus |
X | 6810538..6810638 | 692..792 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 23:16:52 Download gff for
BO11214.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6705513..6705606 | 13..108 | 96 | | Minus |
arm_X | 6704571..6704671 | 692..792 | 100 | -> | Minus |
arm_X | 6704735..6705080 | 346..691 | 100 | -> | Minus |
arm_X | 6705150..6705285 | 210..345 | 100 | -> | Minus |
arm_X | 6705350..6705450 | 109..209 | 100 | -> | Minus |
BO11214.5prime Sequence
911 bp (779 high quality bases) assembled on 2006-04-19
> BO11214.5prime
GAAGTTATCAGTCGACATGGCCTGGCGATTCAAGGCTTCCAAGTACAAAA
ATGCCGCACCCATTGTGCCCAAGGCGGAGGCATGCGTCCGCGAGATCTGC
GTGGGCAGCTACCAGACGTACGGTAACAACATCGCCGCCTCCGGCGCCTT
CATGGCCTTCAACTGGGAGCACACCGGGTCCAGCGTCGCTGTCCTCCCGC
TGGACGACTGCGGCCGGAAGAGCAAGACCATGCCGCTGCTCCATGGACAC
ACGGACACAGTGACGGACCTTAAGTTCTCCCCGTTCCACGACGGGCTGCT
GGCCACCGCCTCGCAGGATTGCCTGGTCAAGATCTGGCACATACCGGAAA
AAGGTCTGGAGCAGTCGCTTTCCGATCCGGAGGCAATCTTCTCACACAAG
CAGAGACGCGTAGAGACAGTGGGCTTCCATCCAACAGCAGATGGTTTGAT
GTACTCCACAGCCGCCGGCTGCGTGGCTCTCTTCGATCTCAGCACTCAAA
AGGAGATATTCTCGAACAATGAGCACCCCGAGGTGATACAGTCGGCCAGT
TGGCGCGAGGACGGTTCTGTTTTGGCCACCAGTTGCAAGGATAAGAATGT
GCGAATCTTCGATCCCCGTGCCGCTGGTTCACCCATCCAGCTGACTGCTG
AATCGCATCAGAGCATCAAGGATTCGCGGGTGGTGTGGTTAGGCAATCAG
CATCGCATCCTGACCACTGGCTTCGATGCGGCCCGCCTGCGACAGGTGAT
CATCCGTGATGTGCGCAACTTCAACACTCCAGAGAAAACTCTCGAACTGG
ACTGCTCGACGGGCATATTGATGCCCCTCTTCGATCCCGACACCAATATG
CTTTTCCTAGCCGGAAAGGGTGACACAACCATTAACTATTTGGAAATTAC
GGACAAGGATC
BO11214.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:19:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4532-PE | 3225 | pod1-RE | 1..895 | 17..911 | 4450 | 99.8 | Plus |
CG4532-PA | 3225 | pod1-RA | 1..895 | 17..911 | 4450 | 99.8 | Plus |
CG4532-PB | 3225 | pod1-RB | 1..895 | 17..911 | 4450 | 99.8 | Plus |
CG4532-PC | 3225 | pod1-RC | 1..895 | 17..911 | 4450 | 99.8 | Plus |
CG4532-PD | 3225 | pod1-RD | 1..895 | 17..911 | 4450 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:40:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RG | 6374 | CG4532-RG | 315..1210 | 16..911 | 4465 | 99.9 | Plus |
pod1-RF | 6031 | CG4532-RF | 315..1210 | 16..911 | 4465 | 99.9 | Plus |
pod1-RD | 5837 | CG4532-RD | 354..1249 | 16..911 | 4465 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:40:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6806881..6807279 | 513..911 | 1980 | 99.7 | Plus |
X | 23542271 | X | 6805909..6806220 | 16..327 | 1560 | 100 | Plus |
X | 23542271 | X | 6806617..6806804 | 325..512 | 940 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:40:29 has no hits.
BO11214.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:01:09 Download gff for
BO11214.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-PD | 1..895 | 17..911 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:22:54 Download gff for
BO11214.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4532-PD | 1..895 | 17..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:37:56 Download gff for
BO11214.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 347..1249 | 10..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:27:25 Download gff for
BO11214.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 347..1249 | 10..911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:27:25 Download gff for
BO11214.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6805902..6806218 | 10..325 | 99 | -> | Plus |
X | 6806618..6806804 | 326..512 | 100 | -> | Plus |
X | 6806881..6807279 | 513..911 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:37:56 Download gff for
BO11214.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6699935..6700251 | 10..325 | 99 | -> | Plus |
arm_X | 6700651..6700837 | 326..512 | 100 | -> | Plus |
arm_X | 6700914..6701312 | 513..911 | 99 | | Plus |
BO11214.complete Sequence
3256 bp assembled on 2008-01-16
GenBank Submission: FJ632029
> BO11214.complete
GAAGTTATCAGTCGACATGGCCTGGCGATTCAAGGCTTCCAAGTACAAAA
ATGCCGCACCCATTGTGCCCAAGGCGGAGGCATGCGTCCGCGAGATCTGC
GTGGGCAGCTACCAGACGTACGGTAACAACATCGCCGCCTCCGGCGCCTT
CATGGCCTTCAACTGGGAGCACACCGGGTCCAGCGTCGCTGTCCTCCCGC
TGGACGACTGCGGCCGGAAGAGCAAGACCATGCCGCTGCTCCATGGACAC
ACGGACACAGTGACGGACCTTAAGTTCTCCCCGTTCCACGACGGGCTGCT
GGCCACCGCCTCGCAGGATTGCCTGGTCAAGATCTGGCACATACCGGAAA
AAGGTCTGGAGCAGTCGCTTTCCGATCCGGAGGCAATCTTCTCACACAAG
CAGAGACGCGTAGAGACAGTGGGCTTCCATCCAACAGCAGATGGTTTGAT
GTACTCCACAGCCGCCGGCTGCGTGGCTCTCTTCGATCTCAGCACTCAAA
AGGAGATATTCTCGAACAATGAGCACCCCGAGGTGATACAGTCGGCCAGT
TGGCGCGAGGACGGTTCTGTTTTGGCCACCAGTTGCAAGGATAAGAATGT
GCGAATCTTCGATCCCCGTGCCGCTGGTTCACCCATCCAGCTGACTGCTG
AATCGCATCAGAGCATCAAGGATTCGCGGGTGGTGTGGTTAGGCAATCAG
CATCGCATCCTGACCACTGGCTTCGATGCGGCCCGCCTGCGACAGGTGAT
CATCCGTGATGTGCGCAACTTCAACACTCCAGAGAAAACTCTCGAACTGG
ACTGCTCGACGGGCATATTGATGCCCCTCTTCGATCCCGACACCAATATG
CTTTTCCTAGCCGGAAAGGGTGACACAACCATTAACTATTTGGAGATTAC
GGACAAGGATCCGTATTTGATTGAGGGCTTGCGTCATACTGGCGAGCAGA
CGAAGGGAGCTTGTCTCGTGCCCAAGCGGGCACTTAAAGTCATGGAAGCA
GAGGTTAACCGGGTGTTGCAATTGACCTCCAACATGGTCATACCCATCAT
GTACCAGGTGCCCAGAAAGACATACCGTGATTTCCACGCCGATCTATATC
CGGAGACCACTGGCTACAAGACAGAACTGGTGGCCGGCGAGTGGCTAAAT
GGCAGCAACCAGGCGGTGCCCAAGATGAGCCTTGATCCCGCCAAGCGTGA
GCATGGCGATGAGCCAATTATTCCACGTTTGGGTCCCAAGCCCTTCTCCA
GCACCACAGGTGACGTTTCGTTTGACAAGGTGTTCGCCGTTCCCTTGGCA
CCGGGATCCCACGAGAATATCTCGAACGTGGGTCAGGACAGCGGAGTGGA
GATGACACCAGCTCAGGGAGCCAAACCGGATCTCATTGTGGAAATCGAAA
TTAAAAAGAAACACGAAAGGGAACCTGCTGTGTCCGGAAATGGAGTCCAG
AAGTCACTGACCACTTCGGAGCGCCGTAAGATATTCGAGCAGAACTCTGA
GTCATCGGAGAACTCGACGGAGGGGGAAGATCGCACGGATGCGGATCTGC
GAAGAAACTGCACCTCCAGGAGCAGCTTTGCCGAGCGACGGCGCATATAC
GAGAATCGTTCCAAGAGTCAGGTGGACGAGAAGCCTCAGTCGCCAGTGCC
ATTACGTCGCGAGCACTCCAAAGTGGAGCCGCTGAAGCCCAACCAACAGC
AGCAGCAGCAGGGCAATGTGATCGACACCAAGCGCATCTCTGTTCCAGAG
GGCAAATTAATGGAGGAGCATCGCCGCGGAAATGGCGCTGGACTCAAGAA
GTCCGCCACTGAGGCGGCTTTTAGCGCTGCCAGCACCAAGCGCACTTCCA
CCGTCTTCGGCAAGGTGTCCAAGTTCAGGCACTTGAAGGGCACACCCGGT
CACAAGTCCACGCACATCGAGAACTTGCGCAATCTAAGTCGCCAGATTCC
GGGCGAATGCAATGGCTTCCACGCTAACCAGGAGCGAGTTGCCGTGCCAC
TTTCGGGGCCCGGCGGCAAGATAGCCATCTTTGAGTTGAGCCGCCCTGGA
CGGTTGCCCGATGGTGTGATTCCGTCACTTGTGAACGGCAGCAACATCAT
GGACTTCCAGTGGGATCCGTTCGATGCCCAGCGATTGGCTGTGGCATGCG
ACGATGGCATTGTAAAGATCTGGCATATTGAAGCCGGTGGATTGAGTGAG
CCGACAAACACACCTGCCGGCGAGCTAACCGCTCATCTGGACAAGATTTA
CTTCATACGCTTCCACCCGCTGGCTGCTGATGTTCTGTTAACCGCCAGCT
ACGATATGACCATCAAGCTGTGGGATTTGCGCACCATGACCGAGAAATGC
TCGCTTTCGGGGCATACAGATCAAATCTTTGACTTCGCCTGGAGTCCCTG
CGGCCGATTGGGCGCCACCGTGTGCAAGGATGGCAAGATTAGGGTGTACA
ACCCAAGGAAATCGGAGACACCCATACGGGAGGGCAATGGACCGGTCGGT
ACTCGTGGAGCTCGGATCACCTGGGCGTTGGAGGGACATTACATCGTCTG
CACTGGTTTTGACAAGGTTTCGGAGCGACAGATCAGCGTGTACAATGCAC
AAAAGTTGTCCGCCCCATTGAACACTGCCAGTTTGGATGTCTCACCCTCC
ATACTGATTCCATTCTATGACGAAGATAGCTCCACACTGTTTGTTACGGG
CAAGGGTGACTCCACAATCTACTGTTACGAAATCACCGACGAGGAGCCGT
ACATCTGCCCACTGTCGCACCATCGTTGCACCTCGCTGCACCAGGGCCTC
AGTTTCCTCACCAAGAACCACTGCGACGTGGCCAGCGTGGAGTTCTCAAA
GGCCTATCGGCTAACCAATACCACAATTGAACCCCTGAGTTTCACAGTGC
CCCGCATCAAGAGCGAGCTGTTCCAAGACGATCTGTTCCCACCCACACGC
ATCACCTGGAGCGCCACACTGAGCTCCGAGGATTGGTTCGCTAGCAATGA
TAAGGCGGCACCCAAAGTCAGCCTCAAGCCCGAGGGCATGGAAACTTTAT
CTTCCATACAGCAAGTGCCAGCGCAGCCCGTCAAGAAGCCAGATCATCCC
CAGTTCGGTGGCCAGAAGTCCGAGTACGAGATCAACAAACAGCAGGAGAT
CCAGAAATCGGTTAGCGCGCGCATGGAATTCACCACCAAGCTGGAGCAGG
ACGACATGGAGGGTGTGGATGAGAACGAGTGGCAGGAGGCAAGCTTTCTA
GACCAT
BO11214.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:03:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RD | 3225 | CG4532-PD | 1..3222 | 17..3238 | 16110 | 100 | Plus |
pod1-RC | 3225 | CG4532-PC | 1..3222 | 17..3238 | 16110 | 100 | Plus |
pod1-RB | 3225 | CG4532-PB | 1..3222 | 17..3238 | 16110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:03:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RD | 5837 | CG4532-RD | 354..3576 | 16..3238 | 16115 | 100 | Plus |
pod1-RC | 5737 | CG4532-RC | 254..3476 | 16..3238 | 16115 | 100 | Plus |
pod1-RB | 5797 | CG4532-RB | 314..3536 | 16..3238 | 16115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:03:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6809727..6810639 | 1654..2566 | 4565 | 100 | Plus |
X | 23542271 | X | 6806881..6807437 | 513..1069 | 2785 | 100 | Plus |
X | 23542271 | X | 6810702..6811047 | 2566..2911 | 1730 | 100 | Plus |
X | 23542271 | X | 6805909..6806220 | 16..327 | 1560 | 100 | Plus |
X | 23542271 | X | 6806617..6806804 | 325..512 | 940 | 100 | Plus |
X | 23542271 | X | 6808812..6808995 | 1223..1406 | 920 | 100 | Plus |
X | 23542271 | X | 6809483..6809657 | 1479..1653 | 875 | 100 | Plus |
X | 23542271 | X | 6807494..6807648 | 1068..1222 | 775 | 100 | Plus |
X | 23542271 | X | 6811115..6811252 | 2910..3047 | 690 | 100 | Plus |
X | 23542271 | X | 6811317..6811417 | 3048..3148 | 505 | 100 | Plus |
X | 23542271 | X | 6811478..6811569 | 3147..3238 | 460 | 100 | Plus |
X | 23542271 | X | 6809064..6809137 | 1407..1480 | 370 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:03:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2388 | 1662..1738 | 117 | 62.8 | Plus |
BO11214.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:42 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 1..3225 | 17..3239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:33:08 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 514..3735 | 17..3240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:27 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 514..3735 | 17..3240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:42 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 506..3739 | 10..3244 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:41 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 315..3536 | 17..3240 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:41 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6808812..6808995 | 1223..1406 | 100 | -> | Plus |
X | 6809064..6809137 | 1407..1480 | 100 | -> | Plus |
X | 6809485..6809657 | 1481..1653 | 100 | -> | Plus |
X | 6806618..6806804 | 326..512 | 100 | -> | Plus |
X | 6805910..6806218 | 17..325 | 100 | -> | Plus |
X | 6806881..6807437 | 513..1069 | 100 | -> | Plus |
X | 6807496..6807648 | 1070..1222 | 100 | -> | Plus |
X | 6809727..6810638 | 1654..2565 | 100 | -> | Plus |
X | 6810702..6811047 | 2566..2911 | 100 | -> | Plus |
X | 6811117..6811252 | 2912..3047 | 100 | -> | Plus |
X | 6811317..6811417 | 3048..3148 | 100 | -> | Plus |
X | 6811480..6811569 | 3149..3240 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:27 Download gff for
BO11214.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6701529..6701681 | 1070..1222 | 100 | -> | Plus |
arm_X | 6702845..6703028 | 1223..1406 | 100 | -> | Plus |
arm_X | 6703097..6703170 | 1407..1480 | 100 | -> | Plus |
arm_X | 6703518..6703690 | 1481..1653 | 100 | -> | Plus |
arm_X | 6699943..6700251 | 17..325 | 100 | -> | Plus |
arm_X | 6700651..6700837 | 326..512 | 100 | -> | Plus |
arm_X | 6700914..6701470 | 513..1069 | 100 | -> | Plus |
arm_X | 6703760..6704671 | 1654..2565 | 100 | -> | Plus |
arm_X | 6704735..6705080 | 2566..2911 | 100 | -> | Plus |
arm_X | 6705150..6705285 | 2912..3047 | 100 | -> | Plus |
arm_X | 6705350..6705450 | 3048..3148 | 100 | -> | Plus |
arm_X | 6705513..6705602 | 3149..3240 | 97 | | Plus |
BO11214.pep Sequence
Translation from 16 to 3256
> BO11214.pep
MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNW
EHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQ
DCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAA
GCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRIFDP
RAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVR
NFNTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPY
LIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPR
KTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPAKREHGDEP
IIPRLGPKPFSSTTGDVSFDKVFAVPLAPGSHENISNVGQDSGVEMTPAQ
GAKPDLIVEIEIKKKHEREPAVSGNGVQKSLTTSERRKIFEQNSESSENS
TEGEDRTDADLRRNCTSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREH
SKVEPLKPNQQQQQQGNVIDTKRISVPEGKLMEEHRRGNGAGLKKSATEA
AFSAASTKRTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNG
FHANQERVAVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWD
PFDAQRLAVACDDGIVKIWHIEAGGLSEPTNTPAGELTAHLDKIYFIRFH
PLAADVLLTASYDMTIKLWDLRTMTEKCSLSGHTDQIFDFAWSPCGRLGA
TVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFDK
VSERQISVYNAQKLSAPLNTASLDVSPSILIPFYDEDSSTLFVTGKGDST
IYCYEITDEEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLT
NTTIEPLSFTVPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAPK
VSLKPEGMETLSSIQQVPAQPVKKPDHPQFGGQKSEYEINKQQEIQKSVS
ARMEFTTKLEQDDMEGVDENEWQEASFLDH
BO11214.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:46:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-PD | 1074 | CG4532-PD | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PC | 1074 | CG4532-PC | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PB | 1074 | CG4532-PB | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PA | 1074 | CG4532-PA | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PE | 1074 | CG4532-PE | 1..1074 | 1..1074 | 5651 | 100 | Plus |