Clone BO11219 Report

Search the DGRC for BO11219

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:112
Well:19
Vector:pDNR-Dual
Associated Gene/Transcriptl(1)G0232-RA
Protein status:BO11219.pep:
Sequenced Size:2515

Clone Sequence Records

BO11219.3prime Sequence

742 bp (713 high quality bases) assembled on 2006-04-19

> BO11219.3prime
ATGGTCTAGAAAGCTTGCCTCCGAGTCCGGTTCGCGCTCATCGAAGCCAG
CCAGATCGACCGTCTGTAGCATTCCACGCGAATATGCGTATTCGATGAGG
GCCAGGTGACAGAACACGTACTGATCGGGCATCTGAATGGAGTAGGCTCG
CTGCGACCGGATCTTCTCAACCGTTCCACGTATGTCCGCCGTGCCCACGT
CCTCCAGGCGCGATATGCAAATGTCCAGGGTGATGAATGTACCTGTGCGT
CCAATGCCTGCACTGCAGTGCACCACAATGGGCGGTCCACGGGGATGACC
CGCCCAGGTGTCGCCCAGTCCTTGGACAAGCTGCGCCTGCTTCTCACGCA
CCTTCTGCAGGAAGTTCAGCATGGCCATGGCCGAGCTGGGAACGCCATAG
TCCGGCCAGCTGGTGAACTGCCAATGTGAGACATTGCGAATTTCGTCAGT
CTTTATGTTTCTCAATTCTAACGAGGCAACCATATAGTCCTCGTTGCACT
CAACGCTAATTGTTCGCACATGGTAGTCGCCAAACTCTAAGGAACTTTCT
TCAGTCGGCTCCCAGTACTGGCCGCATTTCACGCGTCCGCGCTCCATCAC
GCGCGTCGTCATCACTATAACTAAACAATGTTGTTCCCAGATCATGCGCC
AAAAGTCCTGGGATGTCTTTGGTAATGGACCTTGAGTTGAAATATAGGCA
TTCTTTTGTTTGTAGCCCTCGACGAAATTCGCATTAATATAA

BO11219.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG32697-PD 1497 l(1)G0232-RD 771..1494 742..19 3595 99.8 Minus
CG32697-PB 2409 l(1)G0232-RB 1683..2406 742..19 3595 99.8 Minus
CG32697-PC 2394 l(1)G0232-RC 1668..2391 742..19 3595 99.8 Minus
CG32697-PA 2484 l(1)G0232-RA 1758..2481 742..19 3595 99.8 Minus
CG32697-PE 1497 l(1)G0232-RE 771..1494 742..19 3595 99.8 Minus
CG32697-PF 1794 l(1)G0232-RF 1068..1791 742..19 3595 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232-RH 2498 CG32697-RH 1388..2111 742..19 3605 99.9 Minus
l(1)G0232-RG 5668 CG32697-RG 2131..2854 742..19 3605 99.9 Minus
l(1)G0232-RI 2203 CG32697-RI 1093..1816 742..19 3605 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:08:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9629668..9629899 451..682 1160 100 Plus
X 23542271 X 9629109..9629336 19..246 1140 100 Plus
X 23542271 X 9629394..9629605 241..452 1060 100 Plus
X 23542271 X 9629961..9630024 679..742 305 98.4 Plus
Blast to na_te.dros performed on 2015-02-10 20:08:53 has no hits.

BO11219.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:01:17 Download gff for BO11219.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32697-PF 1070..1794 18..740 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:23:08 Download gff for BO11219.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32697-PF 1070..1794 18..740 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:44:17 Download gff for BO11219.3prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RI 1093..1816 19..742 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:47:44 Download gff for BO11219.3prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RI 1093..1816 19..742 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:47:44 Download gff for BO11219.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9629396..9629603 243..450 100 <- Plus
X 9629668..9629897 451..680 100 <- Plus
X 9629963..9630024 681..742 98   Plus
X 9629109..9629332 19..242 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:44:17 Download gff for BO11219.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9523142..9523365 19..242 100 <- Plus
arm_X 9523429..9523636 243..450 100 <- Plus
arm_X 9523701..9523930 451..680 100 <- Plus
arm_X 9523996..9524057 681..742 98   Plus

BO11219.5prime Sequence

674 bp (527 high quality bases) assembled on 2006-04-19

> BO11219.5prime
GAAGTTATCAGTCGACATGCAGCAAACGCAATGGAATAAGGACAGGCAGG
AGGATAGAAACAACAATAGCGGCAGCAGGAGCGAGCAGGATAGCGGCTGT
CATCGGCGTCTTTTCCTGTGCATTGCCAAGGCTGTGAAACAATTCATTGA
TCTCTGCAACAATCTAGGTGCTAACTGCAGCACGACGACAGCCACATCCC
CGTCAACTTCCTCCTCCTCAGCCAGCAGCACGCAGAACTTAATAGCAGTA
GTGCCGCCACAGTTGCAGCAGCTGCAGGTGCAATTACCGGCGCCAGGTGG
AGGAGGAGGAGCAGGTGCAGGAGGAGGAGGTGGTGGAGGTGGGGGAGCTG
CGCCTGTGAGGCGCCNCATCTCGCATACGACAGCCGTGAAGTTTTTGTAC
GCCCGTAAATTTGATATACCACGAGCAGTCTCACTGTACGAACAGCATGA
ACAGATCCGCCTGAAGGAGTATCTATATAACATCGATCCGGATGTGGAGC
CCTTGCGCTCCGAGTTGCAGACCGGCAAGTTCACAATCCTGCCCGCACGC
ACTTCCAGTGGCGCTGCCTTCGCCCTTTTCACCGCCAATCAACACAGTCC
GCTGAGCGTTTCGCACACAACCACGCTGCAGGGCATCGACTATCAGCTGG
ACTGTGCGCTCCAGGATTCCGAAA

BO11219.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG32697-PA 2484 l(1)G0232-RA 1..653 17..669 3146 99.2 Plus
CG32697-PB 2409 l(1)G0232-RB 38..578 129..669 2586 99 Plus
CG32697-PC 2394 l(1)G0232-RC 25..563 131..669 2576 99 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232-RA 3046 CG32697-RA 179..831 17..669 3194 99.2 Plus
l(1)G0232-RB 2969 CG32697-RB 214..754 129..669 2634 99.1 Plus
l(1)G0232-RG 5668 CG32697-RG 487..1026 130..669 2629 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9643957..9644369 541..129 2054 99.8 Minus
X 23542271 X 9643760..9643888 669..541 585 96.9 Minus
X 23542271 X 9650484..9650598 131..17 575 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:53:37 has no hits.

BO11219.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:01:18 Download gff for BO11219.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32697-PA 1..654 17..671 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:23:09 Download gff for BO11219.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32697-PA 1..654 17..671 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:17:56 Download gff for BO11219.5prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 174..832 11..671 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:52:57 Download gff for BO11219.5prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 174..832 11..671 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:52:57 Download gff for BO11219.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9643758..9643887 542..671 96 <- Minus
X 9643957..9644367 131..541 99 <- Minus
X 9650485..9650603 11..130 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:17:56 Download gff for BO11219.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9537791..9537920 542..671 96 <- Minus
arm_X 9537990..9538400 131..541 99 <- Minus
arm_X 9544518..9544636 11..130 97   Minus

BO11219.complete Sequence

2515 bp assembled on 2008-01-16

GenBank Submission: FJ632030

> BO11219.complete
GAAGTTATCAGTCGACATGCAGCAAACGCAATGGAATAAGGACAGGCAGG
AGGATAGAAACAACAATAGCGGCAGCAGGAGCGAGCAGGATAGCGGCTGT
CATCGGCGTCTTTTCCTGTGCATTGCCAAGGCTGTGAAACAATTCATTGA
TCTCTGCAACAATCTAGGTGCTAACTGCAGCACGACGACAGCCACATCCC
CGTCAACTTCCTCCTCCTCAGCCAGCAGCACGCAGAACTTAATAGCAGTA
GTGCCGCCACAGTTGCAGCAGCTGCAGGTGCAATTACCGGCGCCAGGTGG
AGGAGGAGGAGCAGGTGCAGGAGGAGGAGGTGGTGGAGGTGGGGGAGCTG
CGCCTGTGAGGCGCCACATCTCGCATACGACAGCCGTGAAGTTTTTGTAC
GCCCGTAAATTTGATATACCACGAGCAGTCTCACTGTACGAACAGCATGA
ACAGATCCGCCTGAAGGAGTATCTATATAACATCGATCCGGATGTGGAGC
CCTTGCGCTCCGAGTTGCAGACCGGCAAGTTCACAATCCTGCCCGCACGC
ACTTCCAGTGGCGCTGCCATCGCCCTTTTCACCGCCAATCGACACAGTCC
GCTGAGCGTTTCGCACACAACCACGCTGCAGGGCATCGTCTATCAGCTGG
ACAGTGCGCTCCAGGATTCGGAGACGCAGCGTGCCGGGCTCGTTTTTATC
TACGACATGAGCGGCTCCAAGTATTCCAACTTCGACTACGACCTCTCCCA
GAAGATTCTCACACTGCTTAAGGGCGGCTATCCAGCGCGTCTGAAGAAGG
TCCTGATCGTGACGGCGCCACTGTGGTTCAAGGCACCCTTCAAGATCCTG
CGTCTGTTCGTGCGCGAGAAGCTGCGCGAGCGAGTGTTCACTGTATCGGT
GCCTCAATTGGCGCTGCACGTGCCGCGCAAGGCGCTGCCCATTCACTTGG
GTGGCACGCTGGAGGTCGATCACGCCACATGGTTGCTCAGCTGCCGCCAA
TCGATGACGAATCGTGAGGACGAGCTGCTGGCCAATATCGTGGGTGTGGG
CGGTGGATCCGGATCCGGTTCAGCAGCTGGATCAGCAGCAATTGTGTCCA
CCAATGGCACGGAAACCGAGGCCGCGACAACGGCAGCCACGATAATCAGC
GCCGTCCACCAGTTGGGCGATAATAATACCACCGTGGTGACGGTCAGCAA
TGGCGTCGGTCCAGCTGGATCGGCATCTGGCGGAGCAACGACAGCAGCGT
CGGCGGCGACGGAACCCAACGAAAATATCACAATCAACGGACTGAGTCCA
AGCCACCGTCAGGCGGCGAATAACAGCAGTAGCAGTAGCAGCAGTGCAGC
CACAGTGGCCAATCCCCTCAAGCTCAACACAAGTGGCTCCGCGGACAACA
ATAGTACCATCACGAACGCCACCACAGCTGCTGGAGCAGCCGGAGCAGCT
GCTGGCACCACCACCAATGGCGGCGGCGAGTTCTGGTCAGAGAATCCACC
CAGCAGCGCCTCATCCGGCTTCAGTGACGATGATAGTCTCGCCGGTCAAG
AGGGCGATCCCAAGCCCATTGATCAGATTGTTCAGATGGTTAAGCAGCGC
GGACGCCATGGTCTGATTAAGGAGTACGCGGACATTCGGAATAGGGCGCC
CGAGGGCACCTTTCTGCATGCGAGAATGCGGGCCAATCTGACCAAGAATC
GCTACACAGACGTCCTCTGCTACGATCACAGTCGAGTTGTTCTGGCACAC
GAAGACGGCGACGAGCCGTCGGATTATATTAATGCGAATTTCGTCGATGG
CTACAAACAAAAGAATGCCTATATTTCAACTCAAGGTCCATTACCAAAGA
CATCCCAGGACTTTTGGCGCATGATCTGGGAACAACATTGTTTAGTTATA
GTGATGACGACGCGCGTGATGGAGCGCGGACGCGTGAAATGCGGCCAGTA
CTGGGAGCCGACTGAAGAAAGTTCCTTAGAGTTTGGCGACTACCATGTGC
GAACAATTAGCGTTGAGTGCAACGAGGACTATATGGTTGCCTCGTTAGAA
TTGAGAAACATAAAGACTGACGAAATTCGCAATGTCTCACATTGGCAGTT
CACCAGCTGGCCGGACTATGGCGTTCCCAGCTCGGCCATGGCCATGCTGA
ACTTCCTGCAGAAGGTGCGTGAGAAGCAGGCGCAGCTTGTCCAAGGACTG
GGCGACACCTGGGCGGGTCATCCCCGTGGACCGCCCATTGTGGTGCACTG
CAGTGCAGGCATTGGACGCACAGGTACATTCATCACCCTGGACATTTGCA
TATCGCGCCTGGAGGACGTGGGCACGGCGGACATACGTGGAACGGTTGAG
AAGATCCGGTCGCAGCGAGCCTACTCCATTCAGATGCCCGATCAGTACGT
GTTCTGTCACCTGGCCCTCATCGAATACGCATATTCGCGTGGAATGCTAC
AGACGGTCGATCTGGCTGGCTTCGATGAGCGCGAACCGGACTCGGAGGCA
AGCTTTCTAGACCAT

BO11219.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:17:56
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232-RA 2484 CG32697-PA 1..2481 17..2497 12405 100 Plus
l(1)G0232-RB 2409 CG32697-PB 38..2406 129..2497 11845 100 Plus
l(1)G0232-RG 2373 CG32697-PG 3..2370 130..2497 11840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232-RA 3046 CG32697-RA 179..2659 17..2497 12405 100 Plus
l(1)G0232-RB 2969 CG32697-RB 214..2582 129..2497 11845 100 Plus
l(1)G0232-RG 5668 CG32697-RG 487..2854 130..2497 11840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:17:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9630194..9631097 1674..771 4520 100 Minus
X 23542271 X 9643957..9644369 541..129 2065 100 Minus
X 23542271 X 9643656..9643888 773..541 1165 100 Minus
X 23542271 X 9629668..9629899 2065..1834 1160 100 Minus
X 23542271 X 9629109..9629336 2497..2270 1140 100 Minus
X 23542271 X 9629394..9629605 2275..2064 1060 100 Minus
X 23542271 X 9629961..9630125 1837..1673 825 100 Minus
X 23542271 X 9650484..9650598 131..17 575 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:17:55 has no hits.

BO11219.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:46 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..2484 17..2498 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:34:12 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 160..2640 17..2499 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:41 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 179..2659 17..2499 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:47 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 155..2640 11..2497 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:07:57 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 179..2659 17..2499 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:07:57 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
X 9643657..9643887 542..772 100 <- Minus
X 9630194..9631095 773..1674 100 <- Minus
X 9629107..9629332 2274..2499 99 <- Minus
X 9629396..9629603 2066..2273 100 <- Minus
X 9629668..9629897 1836..2065 100 <- Minus
X 9629963..9630123 1675..1835 100 <- Minus
X 9643957..9644367 131..541 100 <- Minus
X 9650485..9650598 17..130 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:41 Download gff for BO11219.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9544518..9544631 17..130 100   Minus
arm_X 9523140..9523365 2274..2499 99 <- Minus
arm_X 9523429..9523636 2066..2273 100 <- Minus
arm_X 9523701..9523930 1836..2065 100 <- Minus
arm_X 9523996..9524156 1675..1835 100 <- Minus
arm_X 9524227..9525128 773..1674 100 <- Minus
arm_X 9537690..9537920 542..772 100 <- Minus
arm_X 9537990..9538400 131..541 100 <- Minus

BO11219.pep Sequence

Translation from 16 to 2515

> BO11219.pep
MQQTQWNKDRQEDRNNNSGSRSEQDSGCHRRLFLCIAKAVKQFIDLCNNL
GANCSTTTATSPSTSSSSASSTQNLIAVVPPQLQQLQVQLPAPGGGGGAG
AGGGGGGGGGAAPVRRHISHTTAVKFLYARKFDIPRAVSLYEQHEQIRLK
EYLYNIDPDVEPLRSELQTGKFTILPARTSSGAAIALFTANRHSPLSVSH
TTTLQGIVYQLDSALQDSETQRAGLVFIYDMSGSKYSNFDYDLSQKILTL
LKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPQLAL
HVPRKALPIHLGGTLEVDHATWLLSCRQSMTNREDELLANIVGVGGGSGS
GSAAGSAAIVSTNGTETEAATTAATIISAVHQLGDNNTTVVTVSNGVGPA
GSASGGATTAASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANP
LKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASS
GFSDDDSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFL
HARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKN
AYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTE
ESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPD
YGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIG
RTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLA
LIEYAYSRGMLQTVDLAGFDEREPDSEASFLDH

BO11219.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:20
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232-PA 827 CG32697-PA 1..827 1..827 4289 100 Plus
l(1)G0232-PB 802 CG32697-PB 13..802 38..827 4081 99.9 Plus
l(1)G0232-PG 790 CG32697-PG 2..790 39..827 4080 100 Plus
l(1)G0232-PC 797 CG32697-PC 9..797 39..827 4080 100 Plus
l(1)G0232-PF 597 CG32697-PF 1..597 231..827 3103 100 Plus