Clone Sequence Records
BO11245.3prime Sequence
785 bp (669 high quality bases) assembled on 2006-04-19
> BO11245.3prime
ATGGTCTAGAAAGCTTGCCTGTTGTGAGCTCGCCAGCTGCTGCTGCTGCT
GAGCTGCGGCCGCAGTTGCATTGCCAGGTGGCGGCGGCGATGGCTGCTGC
TGCTGCAGCTGGTGTGAGGTCGCTGCCGTCGACGCCTGCTGCTGATGGTG
TGCAGGCGGCGTCGACGATGACGACGCCGACGACACAGGCTGATGATGCA
ATTGCGGCGGCAGTGCCTGTTGTTGAGATGGCGACTGTGGCTGTTGCTGC
TGGGAACCGCTGGACGCGGCTCCGGCTAGGCTCTGTTGCTGTTGTTGCAA
TTGTTCTTTGGCAGCTTTCTGTTTTTTGGTTATTGGCGGCGGATTTGTCG
AAAGCATCATGGCTCGGATGCGTCGCTGGGCAGACTGTACACTGTAGAAT
AGTCCGATGATGTGCACTGGTGTCTCTTCATCTCCACCGGATGGCGGTGC
AAGGGCATGTTCGGGCAATTTGATCACACTGCCCGTCACGCGCTGCAATT
CCCGCACATTTTGGCCACCCTTGCCAATGATACGGCCCACCTGAGAACTG
GCCACAAGCAACTCAACCGTGAGGCGCACATCGTCCGTGCCACACATGAA
GCCTTCTTCGCGCATCTTCTCGAAGATCATGTACTGCGCCTTCCACTGAA
CCTCCGGTGTGCCAACAATCGTCACCTTGCGCTCCGTTTGTTGGTCCACC
GGCTTGTCGGCGTCAAGGGGGGCTATTTTAGGGGATGCGTTCGAGAAGCG
CATTATGCTTCGAATATGCAAGCCCCTGGTGCCGA
BO11245.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:19:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1691-PI | 1767 | Imp-RI | 998..1764 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PB | 1701 | Imp-RB | 932..1698 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PA | 1701 | Imp-RA | 932..1698 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PF | 1722 | Imp-RF | 953..1719 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PH | 1722 | Imp-RH | 953..1719 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PG | 1722 | Imp-RG | 953..1719 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PD | 1722 | Imp-RD | 953..1719 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PE | 1722 | Imp-RE | 953..1719 | 785..19 | 3635 | 98.9 | Minus |
| CG1691-PC | 1701 | Imp-RC | 932..1698 | 785..19 | 3635 | 98.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RL | 4220 | CG1691-RL | 2379..3145 | 785..19 | 3715 | 99 | Minus |
| Imp-RB | 2863 | CG1691-RB | 1238..2004 | 785..19 | 3715 | 99 | Minus |
| Imp-RK | 3468 | CG1691-RK | 1627..2393 | 785..19 | 3715 | 99 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10797072..10797442 | 19..389 | 1855 | 100 | Plus |
| X | 23542271 | X | 10797834..10798080 | 539..785 | 1130 | 97.2 | Plus |
| X | 23542271 | X | 10797508..10797666 | 385..543 | 780 | 99.4 | Plus |
Blast to na_te.dros performed 2015-02-12 04:08:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6920 | 255..53 | 210 | 59.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6911 | 252..81 | 209 | 60.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..7001 | 308..36 | 204 | 58 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2537 | 305..72 | 203 | 58.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6923 | 303..87 | 188 | 58.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 147..36 | 179 | 66.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2785..3012 | 251..21 | 167 | 58.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6875 | 347..189 | 164 | 61.4 | Minus |
BO11245.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:01:55 Download gff for
BO11245.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-PC | 933..1701 | 15..784 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:23:59 Download gff for
BO11245.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1691-PC | 933..1701 | 15..784 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:22:36 Download gff for
BO11245.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RK | 1628..2397 | 14..784 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:48:28 Download gff for
BO11245.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RK | 1628..2397 | 14..784 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:48:28 Download gff for
BO11245.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10797068..10797437 | 14..384 | 99 | <- | Plus |
| X | 10797508..10797663 | 385..540 | 99 | <- | Plus |
| X | 10797836..10798079 | 541..784 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:22:36 Download gff for
BO11245.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10691101..10691470 | 14..384 | 99 | <- | Plus |
| arm_X | 10691541..10691696 | 385..540 | 99 | <- | Plus |
| arm_X | 10691869..10692112 | 541..784 | 97 | | Plus |
BO11245.5prime Sequence
776 bp (710 high quality bases) assembled on 2006-04-19
> BO11245.5prime
GAAGTTATCAGTCGACATGCACAGCAACAATAATAGCAGCAGACTCAACA
ACAACATAAGCAACAATTATTATCAACAAAAACAATCGCTTATACGCTAT
TTGGATCGAGCTGCTGTTGGTCTGAACGGTGTCGAGTTCGAGGGCAGCAA
GCTGCATGCCGAGCAGCTGGACAAGAACCAGCGGCGTAGCCAGCGTAACC
AGCGCAATCCGTATCCGGGTATGCCCGGTCCCGGACGCCAGGCGGACTTT
CCGCTGCGCATTCTTGTGCAGAGCGAAATGGTGGGCGCCATCATTGGTCG
ACAGGGCAGCACCATCAGGACGATCACACAACAGAGCCGTGCTCGCGTCG
ACGTCCATCGTAAGGAGAATGTTGGATCGCTGGAGAAATCGATTACGATC
TATGGCAATCCGGAGAACTGCACCAACGCCTGTAAGCGCATCCTGGAAGT
TATGCAGCAGGAGGCCATCTCTACGAATAAGGGTGAAATTTGCCTCAAAA
TACTCGCCCACAACAATTTGATTGGACGAATCATTGGCAAGTCGGGCAAT
ACCATTAAACGGATCATGCAGGACACCGATACGAAGATCACTGTCAGCTC
TATCAACGACATCAACAGCTTCAATTTGGAGCGAATCATTACGGTCAAGG
GATTAATTGAGAACATGTCGCGTGCTGAGAACCAAATTAGCACCAAGCTG
CGCCAGAGCTACGAGAACGATCTGCAGGCGATGGCGCCGCAGAGCCTCAT
GTTCCCCGGTCTCCATCCGATGGCAA
BO11245.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:19:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1691-PB | 1701 | Imp-RB | 1..760 | 17..776 | 3800 | 100 | Plus |
| CG1691-PA | 1701 | Imp-RA | 1..760 | 17..776 | 3800 | 100 | Plus |
| CG1691-PC | 1701 | Imp-RC | 1..760 | 17..776 | 3800 | 100 | Plus |
| CG1691-PF | 1722 | Imp-RF | 113..781 | 108..776 | 3345 | 100 | Plus |
| CG1691-PH | 1722 | Imp-RH | 113..781 | 108..776 | 3345 | 100 | Plus |
| CG1691-PG | 1722 | Imp-RG | 113..781 | 108..776 | 3345 | 100 | Plus |
| CG1691-PD | 1722 | Imp-RD | 113..781 | 108..776 | 3345 | 100 | Plus |
| CG1691-PE | 1722 | Imp-RE | 113..781 | 108..776 | 3345 | 100 | Plus |
| CG1691-PI | 1767 | Imp-RI | 137..516 | 108..487 | 1900 | 100 | Plus |
| CG1691-PI | 1767 | Imp-RI | 533..826 | 483..776 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RB | 2863 | CG1691-RB | 307..1066 | 17..776 | 3800 | 100 | Plus |
| Imp-RA | 3300 | CG1691-RA | 528..1287 | 17..776 | 3800 | 100 | Plus |
| Imp-RC | 6762 | CG1691-RC | 501..1260 | 17..776 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:00:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10798619..10798994 | 483..108 | 1880 | 100 | Minus |
| X | 23542271 | X | 10798252..10798545 | 776..483 | 1470 | 100 | Minus |
| X | 23542271 | X | 10805266..10805357 | 108..17 | 460 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 15:00:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2450 | 7..85 | 146 | 68.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2396..2458 | 21..84 | 137 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2366..2429 | 21..85 | 133 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2374 | 22..84 | 132 | 69.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2486 | 25..66 | 120 | 76.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2951..2998 | 21..65 | 116 | 75 | Plus |
| BS | 5142 | BS BS 5142bp | 2037..2076 | 29..68 | 110 | 75 | Plus |
BO11245.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:01:56 Download gff for
BO11245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-PC | 1..758 | 17..774 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:24:01 Download gff for
BO11245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1691-PC | 1..758 | 17..774 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:04:44 Download gff for
BO11245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 495..1258 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:12:24 Download gff for
BO11245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 495..1258 | 9..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:12:24 Download gff for
BO11245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10798254..10798544 | 484..774 | 100 | <- | Minus |
| X | 10798619..10798993 | 109..483 | 100 | <- | Minus |
| X | 10805266..10805363 | 9..108 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:04:44 Download gff for
BO11245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10692287..10692577 | 484..774 | 100 | <- | Minus |
| arm_X | 10692652..10693026 | 109..483 | 100 | <- | Minus |
| arm_X | 10699299..10699396 | 9..108 | 96 | | Minus |
BO11245.complete Sequence
1732 bp assembled on 2008-01-16
GenBank Submission: FJ632039
> BO11245.complete
GAAGTTATCAGTCGACATGCACAGCAACAATAATAGCAGCAGACTCAACA
ACAACATAAGCAACAATTATTATCAACAAAAACAATCGCTTATACGCTAT
TTGGATCGAGCTGCTGTTGGTCTGAACGGTGTCGAGTTCGAGGGCAGCAA
GCTGCATGCCGAGCAGCTGGACAAGAACCAGCGGCGTAGCCAGCGTAACC
AGCGCAATCCGTATCCGGGTATGCCCGGTCCCGGACGCCAGGCGGACTTT
CCGCTGCGCATTCTTGTGCAGAGCGAAATGGTGGGCGCCATCATTGGTCG
ACAGGGCAGCACCATCAGGACGATCACACAACAGAGCCGTGCTCGCGTCG
ACGTCCATCGTAAGGAGAATGTTGGATCGCTGGAGAAATCGATTACGATC
TATGGCAATCCGGAGAACTGCACCAACGCCTGTAAGCGCATCCTGGAAGT
TATGCAGCAGGAGGCCATCTCTACGAATAAGGGTGAAATTTGCCTCAAAA
TACTCGCCCACAACAATTTGATTGGACGAATCATTGGCAAGTCGGGCAAT
ACCATTAAACGGATCATGCAGGACACCGATACGAAGATCACTGTCAGCTC
TATCAACGACATCAACAGCTTCAATTTGGAGCGAATCATTACGGTCAAGG
GATTAATTGAGAACATGTCGCGTGCTGAGAACCAAATTAGCACCAAGCTG
CGCCAGAGCTACGAGAACGATCTGCAGGCGATGGCGCCGCAGAGCCTCAT
GTTCCCCGGTCTCCATCCGATGGCAATGATGTCGACACCGGGCAACGGCA
TGGTCTTCAATACGAGCATGCCGTTCCCCTCGTGTCAAAGCTTTGCCATG
TCCAAGACTCCGGCTAGTGTGGTGCCACCGGTCTTCCCCAATGACCTACA
GGAAACCACCTATCTCTACATACCCAACAACGCTGTCGGCGCCATTATCG
GCACCAGGGGCTCGCATATCCGAAGCATAATGCGCTTCTCGAACGCATCC
CTTAAAATAGCCCCCCTCGACGCCGACAAGCCGCTGGACCAACAAACGGA
GCGCAAGGTGACGATTGTTGGCACACCGGAGGGTCAGTGGAAGGCGCAGT
ACATGATCTTCGAGAAGATGCGCGAAGAAGGCTTCATGTGTGGCACGGAC
GATGTGCGCCTCACGGTTGAGTTGCTTGTGGCCAGTTCTCAGGTGGGCCG
TATCATTGGCAAGGGTGGCCAAAATGTGCGGGAATTGCAGCGCGTGACGG
GCAGTGTGATCAAATTGCCCGAACATGCCCTTGCACCGCCATCCGGTGGA
GATGAAGAGACACCAGTGCACATCATCGGACTATTCTACAGTGTACAGTC
TGCCCAGCGACGCATCCGAGCCATGATGCTTTCGACAAATCCGCCGCCAA
TAACCAAAAAACAGAAAGCTGCCAAAGAACAATTGCAACAACAGCAACAG
AGCCTAGCCGGAGCCGCGTCCAGCGGTTCCCAGCAGCAACAGCCACAGTC
GCCATCTCAACAACAGGCACTGCCGCCGCAATTGCATCATCAGCCTGTGT
CGTCGGCGTCGTCATCGTCGACGCCGCCTGCACACCATCAGCAGCAGGCG
TCGACGGCAGCGACCTCACACCAGCTGCAGCAGCAGCAGCCATCGCCGCC
GCCACCTGGCAATGCAACTGCGGCCGCAGCTCAGCAGCAGCAGCAGCTGG
CGAGCTCACAACAGGCAAGCTTTCTAGACCAT
BO11245.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:58:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RB | 1701 | CG1691-PB | 1..1698 | 17..1714 | 8460 | 99.9 | Plus |
| Imp-RA | 1701 | CG1691-PA | 1..1698 | 17..1714 | 8460 | 99.9 | Plus |
| Imp-RC | 1701 | CG1691-PC | 1..1698 | 17..1714 | 8460 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:59:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RB | 2863 | CG1691-RB | 307..2004 | 17..1714 | 8460 | 99.9 | Plus |
| Imp-RA | 3300 | CG1691-RA | 528..2225 | 17..1714 | 8460 | 99.9 | Plus |
| Imp-RC | 6762 | CG1691-RC | 501..2198 | 17..1714 | 8460 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10797834..10798545 | 1194..483 | 3545 | 99.9 | Minus |
| X | 23542271 | X | 10798619..10798994 | 483..108 | 1880 | 100 | Minus |
| X | 23542271 | X | 10797072..10797442 | 1714..1344 | 1855 | 100 | Minus |
| X | 23542271 | X | 10797508..10797666 | 1348..1190 | 780 | 99.4 | Minus |
| X | 23542271 | X | 10805266..10805357 | 108..17 | 460 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 15:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6920 | 1478..1680 | 210 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6911 | 1481..1652 | 209 | 60.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..7001 | 1425..1697 | 204 | 58 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2537 | 1428..1661 | 203 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6923 | 1430..1646 | 188 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 1586..1697 | 179 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6875 | 1386..1544 | 164 | 61.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2450 | 7..85 | 146 | 68.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2396..2458 | 21..84 | 137 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2366..2429 | 21..85 | 133 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2374 | 22..84 | 132 | 69.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2486 | 25..66 | 120 | 76.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2951..2998 | 21..65 | 116 | 75 | Plus |
BO11245.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:55 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 1..1701 | 17..1718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:33:04 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 497..2194 | 17..1716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:53 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 501..2198 | 17..1716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:55 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 491..2198 | 9..1719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:07:27 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 501..2198 | 17..1716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:07:27 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10797070..10797437 | 1349..1716 | 99 | <- | Minus |
| X | 10797508..10797663 | 1193..1348 | 99 | <- | Minus |
| X | 10797836..10798544 | 484..1192 | 99 | <- | Minus |
| X | 10798619..10798993 | 109..483 | 100 | <- | Minus |
| X | 10805266..10805357 | 17..108 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:53 Download gff for
BO11245.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10691103..10691470 | 1349..1716 | 99 | <- | Minus |
| arm_X | 10691541..10691696 | 1193..1348 | 99 | <- | Minus |
| arm_X | 10691869..10692577 | 484..1192 | 99 | <- | Minus |
| arm_X | 10692652..10693026 | 109..483 | 100 | <- | Minus |
| arm_X | 10699299..10699390 | 17..108 | 100 | | Minus |
BO11245.pep Sequence
Translation from 16 to 1732
> BO11245.pep
MHSNNNSSRLNNNISNNYYQQKQSLIRYLDRAAVGLNGVEFEGSKLHAEQ
LDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTI
RTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEA
ISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN
SFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLH
PMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYL
YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI
VGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKG
GQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRI
RAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQ
ALPPQLHHQPVSSASSSSTPPAHHQQQASTAATSHQLQQQQPSPPPPGNA
TAAAAQQQQQLASSQQASFLDH
BO11245.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-PB | 566 | CG1691-PB | 1..566 | 1..566 | 2889 | 100 | Plus |
| Imp-PA | 566 | CG1691-PA | 1..566 | 1..566 | 2889 | 100 | Plus |
| Imp-PC | 566 | CG1691-PC | 1..566 | 1..566 | 2889 | 100 | Plus |
| Imp-PF | 573 | CG1691-PF | 38..573 | 31..566 | 2731 | 100 | Plus |
| Imp-PD | 573 | CG1691-PD | 38..573 | 31..566 | 2731 | 100 | Plus |
