Clone Sequence Records
BO11264.3prime Sequence
827 bp (810 high quality bases) assembled on 2006-04-19
> BO11264.3prime
ATGGTCTAGAAAGCTTGCGTTCCGAGAATTGCGTTCCCTCTCTGCCTGAA
TGCGGTCCTCCTCCTCCTGTTGGGCCCTATAACGTTCCTCCTCCAATTTT
TCTTGTTCCTCTTGCTCCTCGCGAAGCTTGGTTGCGGCCTCCAGGTAAGC
CTCATAGCTGGGGAAATCCTCAACCTTGAGAACATCCTGTTCTGCTGCCT
CTTCCTCATCTGGTGATCTCTCGTACTCCTCCCCTTGGTCCTCGTCAGGC
TGTTCCTCTCTTTCCTGTTCAACCTGATCCCTTCGCTGTTGCTCGCGCTC
CTGTTCCTCGGCATAGCTGCGGTCGCCATCGTAGGCTTCGTAGTTGGGAT
GGGTTGGCTGTTCCTCTGGCAAACTTTGTTCGGGATGCTGTTGATTTTCT
TGAAGCAATGTTTCTTGCTGCTGTCGCTCACGCTCTTGCTCCTCGGCATA
GATTCGATCACGTTCAGCATTTTTCTCTTGTAGGGCTCTACTATATTCTT
CGTAGCTAGGGTATTCTTCAGGACCAGGTTCCTGCTGTCCACGTTCCTGC
TGCTCGCGTTCTTGCTGCTCACGTTCCAATTGCAATTGATATTCTCGCTC
TTGCTGTTCCTGCTGCTCGCGACGCAGTTGCTCCTGCTGTTGTTGCTCGC
GGTCTTCCTCACTGAAGTTGCGATTGGCATCGGTTTCGGGGAGATTTTCG
TTGCCTTCAGGACCATATTGTTCGTATGAGGGATATGGTAGCCGTCCATC
TTCCGGATTATCATCTGGCTGTGGCTCTTGTACCGGATAACCCCACGGGT
TTACTGGTTCAGGATTGTATTCGGGCT
BO11264.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:20:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9280-PC | 3081 | Glt-RC | 2270..3078 | 827..19 | 4045 | 100 | Minus |
| CG9280-PB | 3081 | Glt-RB | 2270..3078 | 827..19 | 4045 | 100 | Minus |
| CG9280-PA | 3081 | Glt-RA | 2270..3078 | 827..19 | 4045 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:13:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-RD | 3260 | CG9280-RD | 2320..3128 | 827..19 | 4045 | 100 | Minus |
| Glt-RA | 3373 | CG9280-RA | 2433..3241 | 827..19 | 4045 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:12:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8675864..8676672 | 827..19 | 4045 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 00:12:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..7197 | 655..185 | 279 | 55.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..7080 | 680..315 | 236 | 56.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6887 | 647..528 | 231 | 65.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2424 | 699..543 | 225 | 62.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2378..2702 | 671..341 | 189 | 54.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2495 | 647..493 | 188 | 60.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2934 | 671..528 | 188 | 63.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6789..6901 | 647..529 | 186 | 63.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2852..3000 | 671..531 | 177 | 62 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6828..6928 | 656..553 | 171 | 64.4 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1148 | 647..573 | 150 | 66.7 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..199 | 670..607 | 127 | 68.1 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9229 | 670..607 | 127 | 68.1 | Minus |
| BS | 5142 | BS BS 5142bp | 2019..2108 | 647..558 | 126 | 60 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2618..2665 | 646..599 | 123 | 72.9 | Minus |
BO11264.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:02:28 Download gff for
BO11264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-PC | 2270..3081 | 15..827 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:24:45 Download gff for
BO11264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9280-PA | 2270..3081 | 15..827 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:51:01 Download gff for
BO11264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 2433..3247 | 11..827 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:01:58 Download gff for
BO11264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 2433..3247 | 11..827 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:01:58 Download gff for
BO11264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8675864..8676678 | 11..827 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:51:01 Download gff for
BO11264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8675864..8676678 | 11..827 | 99 | | Minus |
BO11264.5prime Sequence
809 bp (714 high quality bases) assembled on 2006-04-19
> BO11264.5prime
GAAGTTATCAGTCGACATGAAGCCGTTGCTCCTAGTGTTGGCACTTTGTG
GGGCCCAAGTCCATGCACACTCTGTGGGTCTACGGCCCGACTATAACGAC
TATAGCGACGAGGATACCAGAAGGGATTGGCTCCCCGAGCCGCTGAAGCC
AGTTCCTTGGCAGTCGGAGACCCGATATGCACAGCCCCAAGAAGCTGTGG
TTCAAGCGCCTGAAGTCGGACAGATCTTGGGAATTAGTGGCCATAAAACC
ATTGCCAATCGCCCAGTGAACGCTTTCTTGGGTATACGGTATGGCACGGT
TGGAGGTGGCTTGGCGCGCTTCCAGGCGGCACAACCGATTGGATACCAGG
GACGAGTTAATGCCACCGTCCAGAGCCCCAATTGTGCCCAGTTTCCGGAG
CTCGATCGCCTGAGGTTATCTGAATCGCGGGGAGAAAACGTCGACGATTG
CCTTACCTTGGACATCTACGCACCCGAAGGCGCCAATCAGCTGCCCGTTT
TGGTCTTTGTTCACGGTGAAATGCTGTTCGATGGCGGTTCTGAGGAGGCC
CAACCTGACTATGTTCTGGAAAAGGATGTGCTGTTGGTCTCCATCAACTA
CCGACTGGCTCCATTCGGCTTCCTAAGCGCATTAACCGACGAGCTTCCTG
GAAACGTCGCCCTTTCCGATCTGCAATTGGCTCTTGAGTGGCTGCAACGC
AATGTGGTCCACTTCGGTGGCAATGCGGGACAGGTGACCCTAGTGGGTCA
GGCTGGTGGCGCAACATTGGCACACGCCTTGAGCCTTACCGGTCGTGCCG
GCAATCTCT
BO11264.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:20:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9280-PC | 3081 | Glt-RC | 1..793 | 17..809 | 3915 | 99.7 | Plus |
| CG9280-PB | 3081 | Glt-RB | 1..793 | 17..809 | 3915 | 99.7 | Plus |
| CG9280-PA | 3081 | Glt-RA | 1..793 | 17..809 | 3915 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-RD | 3260 | CG9280-RD | 49..843 | 15..809 | 3945 | 99.7 | Plus |
| Glt-RA | 3373 | CG9280-RA | 162..956 | 15..809 | 3945 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:58:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8673200..8673994 | 15..809 | 3945 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:58:36 has no hits.
BO11264.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:02:29 Download gff for
BO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-PC | 1..793 | 17..809 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:24:46 Download gff for
BO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9280-PA | 1..793 | 17..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:18:27 Download gff for
BO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 158..956 | 10..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:07:32 Download gff for
BO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 158..956 | 10..809 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:07:32 Download gff for
BO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8673196..8673994 | 10..809 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:18:27 Download gff for
BO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8673196..8673994 | 10..809 | 99 | | Plus |
BO11264.complete Sequence
3112 bp assembled on 2008-01-16
GenBank Submission: FJ632047
> BO11264.complete
GAAGTTATCAGTCGACATGAAGCCGTTGCTCCTAGTGTTGGCACTTTGTG
GGGCCCAAGTCCATGCACACTCTGTGGGTCTACGGCCCGACTATAACGAC
TATAGCGACGAGGATACCAGAAGGGATTGGCTCCCCGAGCCGCTGAAGCC
AGTTCCTTGGCAGTCGGAGACCCGATATGCACAGCCCCAAGAAGCTGTGG
TTCAAGCGCCTGAAGTCGGACAGATCTTGGGAATTAGTGGCCATAAAACC
ATTGCCAATCGCCCAGTGAACGCTTTCTTGGGTATACGGTATGGCACGGT
TGGAGGTGGCTTGGCGCGCTTCCAGGCGGCACAACCGATTGGATACCAGG
GACGAGTTAATGCCACCGTCCAGAGCCCCAATTGTGCCCAGTTTCCGGAG
CTCGATCGCCTGAGGTTATCTGAATCGCGGGGAGAAAACGTCGACGATTG
CCTTACCTTGGACATCTACGCACCCGAAGGCGCCAATCAGCTGCCCGTTT
TGGTCTTTGTTCACGGTGAAATGCTGTTCGATGGCGGTTCTGAGGAGGCC
CAACCTGACTATGTTCTGGAAAAGGATGTGCTGTTGGTCTCCATCAACTA
CCGACTGGCTCCATTCGGCTTCCTAAGCGCATTAACCGACGAGCTTCCTG
GAAACGTCGCCCTTTCCGATCTGCAATTGGCTCTTGAGTGGCTGCAACGC
AATGTGGTCCACTTCGGTGGCAATGCGGGACAGGTGACCCTAGTGGGTCA
GGCTGGTGGCGCAACATTGGCACACGCCTTGAGCCTTAGCGGTCGTGCCG
GCAATCTCTTCCAGCAGCTGATCCTGCAGTCGGGCACCGCCTTGAACCCC
TACCTGATTGACAACCAGCCACTTGACACCTTGAGTACCTTCGCCCGTCT
TGCTCGCTGCCCACCACCATCCATTAACCCATCCGCACAAGGACTTAAGC
CCCTATACGATTGCCTCGCCCGACTGCCCACCTCCCAGCTGGTGGCGGCC
TTCGAGCAGCTGCTTCTTCAAAACGAGCATCTCGGGCTCACCCAACTGGG
TGGCTTCAAACTGGTGGTTGGCGACCCTCTAGGCTTCCTACCCAGCCACC
CAGCCTCACTAGCCACCAACAGCAGCCTTGCACTGCCCATGATTATCGGG
GCCACAAAGGACGCCAGTGCGTTCATCGTGTCGCGAATCTATGATCAGCT
CGCACGACTGCAGTCTCGCAATGTGAGTGACTACATCGACGTTGTCCTGC
GGCACACCGCACCGCCCAGCGAGCACCGCCTCTGGAAGCAGTGGGCACTG
CGCGAGATCTTTACTCCGATCCAAGAACAGACGGCTAGTCTGCAAACAGT
GGCTCCTGGTCTGCTCGAGCTGAGCAACTACATCCTGTATCGTGCCCCCG
TGATTAACTCCATCAGTCAGTCATACCGCTCCGTGCCGGCCTACCTGTAT
ACCTTCGATTACCGCGGAGAGCACCATCGGTTCGGACACCTGTCCAACCC
TCTTCCCTTCGGAGTAGATGCCTCGCTCAGCGATGACAGCGTGTATTTAT
TCCCCTATCCACCCGAGGCTAGTCGCCTGAACCCCTTGGACAGATCGCTG
TCTCGTGCCTTGGTCACAATGTGGGTGAACTTTGCTACTACTGGCGTGCC
CAATCCTAGCTCTGGTGTATGGCCACAGGCTACCTCCGAGTACGGCCCCT
TCCTACGCTTCACAAACAATCAGCAAAGTCCGCTTGAACTAGATCCACAC
TTTGGCGAGGGAATTTACTTGCCAAATTATAGAGTGATCTATAAGCCGAC
GACTAACTTTTCACCTCCGATTACCACCACGACCACCACAACAACAACAA
CCACCACTACCAGCCGTCCATACGCCTACAACCCGTACGCCAATTGGCAA
AACAGGCCTTCTCAGCAGCATCCGAATTGGCATCCTGCGGATCCGGAATA
CGTCAGGGCACAGGAAGCTCGTCAGCAAGAGTTCATCCGTGAGAGGGAGC
AGCGTAGGCGGGAGCAGCAGCTGCGAGACCAACAGCGTTATCCTCAGCAG
GAGCCACGTGAGCAGCAAGACGAGCGAATTCGTCAACAGCGAGAGCAGGA
AGAACGACTGCGTCAGCAGCGAGAGCAAGAAGAACGATTACGCCAGCAGC
GAGAGCTCGAAGAGCGTATTCGTCAGCAACAAGAACGAGAACAGTATGAA
CGCGAGCAGCAAGAGCGAGAGCAACGAGAACGAGAGGAGCTAGAACGTCA
GCAGCGAGAGCGAGAGCAACAGCAACCAGAACAACAGCCCGAATACAATC
CTGAACCAGTAAACCCGTGGGGTTATCCGGTACAAGAGCCACAGCCAGAT
GATAATCCGGAAGATGGACGGCTACCATATCCCTCATACGAACAATATGG
TCCTGAAGGCAACGAAAATCTCCCCGAAACCGATGCCAATCGCAACTTCA
GTGAGGAAGACCGCGAGCAACAACAGCAGGAGCAACTGCGTCGCGAGCAG
CAGGAACAGCAAGAGCGAGAATATCAATTGCAATTGGAACGTGAGCAGCA
AGAACGCGAGCAGCAGGAACGTGGACAGCAGGAACCTGGTCCTGAAGAAT
ACCCTAGCTACGAAGAATATAGTAGAGCCCTACAAGAGAAAAATGCTGAA
CGTGATCGAATCTATGCCGAGGAGCAAGAGCGTGAGCGACAGCAGCAAGA
AACATTGCTTCAAGAAAATCAACAGCATCCCGAACAAAGTTTGCCAGAGG
AACAGCCAACCCATCCCAACTACGAAGCCTACGATGGCGACCGCAGCTAT
GCCGAGGAACAGGAGCGCGAGCAACAGCGAAGGGATCAGGTTGAACAGGA
AAGAGAGGAACAGCCTGACGAGGACCAAGGGGAGGAGTACGAGAGATCAC
CAGATGAGGAAGAGGCAGCAGAACAGGATGTTCTCAAGGTTGAGGATTTC
CCCAGCTATGAGGCTTACCTGGAGGCCGCAACCAAGCTTCGCGAGGAGCA
AGAGGAACAAGAAAAATTGGAGGAGGAACGTTATAGGGCCCAACAGGAGG
AGGAGGACCGCATTCAGGCAGAGAGGGAACGCAATTCTCGGAACGCAAGC
TTTCTAGACCAT
BO11264.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:19:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-RD | 3081 | CG9280-PD | 1..3078 | 17..3094 | 15360 | 99.9 | Plus |
| Glt-RA | 3081 | CG9280-PA | 1..3078 | 17..3094 | 15360 | 99.9 | Plus |
| Glt-RD | 3081 | CG9280-PD | 2048..2220 | 2094..2266 | 190 | 74 | Plus |
| Glt-RD | 3081 | CG9280-PD | 2078..2250 | 2064..2236 | 190 | 74 | Plus |
| Glt-RA | 3081 | CG9280-PA | 2048..2220 | 2094..2266 | 190 | 74 | Plus |
| Glt-RA | 3081 | CG9280-PA | 2078..2250 | 2064..2236 | 190 | 74 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:19:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-RD | 3260 | CG9280-RD | 49..3128 | 15..3094 | 15370 | 99.9 | Plus |
| Glt-RA | 3373 | CG9280-RA | 162..3241 | 15..3094 | 15370 | 99.9 | Plus |
| Glt-RD | 3260 | CG9280-RD | 2098..2270 | 2094..2266 | 190 | 74 | Plus |
| Glt-RD | 3260 | CG9280-RD | 2128..2300 | 2064..2236 | 190 | 74 | Plus |
| Glt-RA | 3373 | CG9280-RA | 2211..2383 | 2094..2266 | 190 | 74 | Plus |
| Glt-RA | 3373 | CG9280-RA | 2241..2413 | 2064..2236 | 190 | 74 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8674763..8676672 | 1185..3094 | 9535 | 99.9 | Plus |
| 2L | 23513712 | 2L | 8673200..8674370 | 15..1185 | 5840 | 99.9 | Plus |
| 2L | 23513712 | 2L | 8675672..8675844 | 2064..2236 | 190 | 74 | Plus |
| 2L | 23513712 | 2L | 8675642..8675814 | 2094..2266 | 190 | 74 | Plus |
Blast to na_te.dros performed 2014-11-28 00:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2934 | 1948..2585 | 339 | 55.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2407..3000 | 2013..2582 | 294 | 56.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..7197 | 2458..2928 | 279 | 55.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..7080 | 2433..2798 | 236 | 56.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6887 | 2466..2585 | 231 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2424 | 2414..2570 | 225 | 62.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6927 | 2084..2280 | 219 | 57.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2665 | 2142..2514 | 217 | 52.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2378..2702 | 2442..2772 | 189 | 54.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2495 | 2466..2620 | 188 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6789..6901 | 2466..2584 | 186 | 63.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6828..6928 | 2457..2560 | 171 | 64.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1148 | 2466..2540 | 150 | 66.7 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..199 | 2443..2506 | 127 | 68.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9229 | 2443..2506 | 127 | 68.1 | Plus |
| BS | 5142 | BS BS 5142bp | 2019..2108 | 2466..2555 | 126 | 60 | Plus |
BO11264.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:58:03 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 1..3081 | 17..3098 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:30:42 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 115..3192 | 17..3096 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:23 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 164..3241 | 17..3096 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:58:03 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 109..3198 | 10..3102 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:58 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 164..3241 | 17..3096 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:58 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8673202..8674369 | 17..1184 | 99 | -> | Plus |
| 2L | 8674763..8676672 | 1185..3096 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:23 Download gff for
BO11264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8673202..8674369 | 17..1184 | 99 | -> | Plus |
| arm_2L | 8674763..8676672 | 1185..3096 | 99 | | Plus |
BO11264.pep Sequence
Translation from 16 to 3112
> BO11264.pep
MKPLLLVLALCGAQVHAHSVGLRPDYNDYSDEDTRRDWLPEPLKPVPWQS
ETRYAQPQEAVVQAPEVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLA
RFQAAQPIGYQGRVNATVQSPNCAQFPELDRLRLSESRGENVDDCLTLDI
YAPEGANQLPVLVFVHGEMLFDGGSEEAQPDYVLEKDVLLVSINYRLAPF
GFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGAT
LAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPP
PSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLV
VGDPLGFLPSHPASLATNSSLALPMIIGATKDASAFIVSRIYDQLARLQS
RNVSDYIDVVLRHTAPPSEHRLWKQWALREIFTPIQEQTASLQTVAPGLL
ELSNYILYRAPVINSISQSYRSVPAYLYTFDYRGEHHRFGHLSNPLPFGV
DASLSDDSVYLFPYPPEASRLNPLDRSLSRALVTMWVNFATTGVPNPSSG
VWPQATSEYGPFLRFTNNQQSPLELDPHFGEGIYLPNYRVIYKPTTNFSP
PITTTTTTTTTTTTTSRPYAYNPYANWQNRPSQQHPNWHPADPEYVRAQE
ARQQEFIREREQRRREQQLRDQQRYPQQEPREQQDERIRQQREQEERLRQ
QREQEERLRQQRELEERIRQQQEREQYEREQQEREQREREELERQQRERE
QQQPEQQPEYNPEPVNPWGYPVQEPQPDDNPEDGRLPYPSYEQYGPEGNE
NLPETDANRNFSEEDREQQQQEQLRREQQEQQEREYQLQLEREQQEREQQ
ERGQQEPGPEEYPSYEEYSRALQEKNAERDRIYAEEQERERQQQETLLQE
NQQHPEQSLPEEQPTHPNYEAYDGDRSYAEEQEREQQRRDQVEQEREEQP
DEDQGEEYERSPDEEEAAEQDVLKVEDFPSYEAYLEAATKLREEQEEQEK
LEEERYRAQQEEEDRIQAERERNSRNASFLDH
BO11264.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-PD | 1026 | CG9280-PD | 1..1026 | 1..1026 | 5391 | 100 | Plus |
| Glt-PA | 1026 | CG9280-PA | 1..1026 | 1..1026 | 5391 | 100 | Plus |
| CG9287-PA | 625 | CG9287-PA | 27..544 | 53..564 | 810 | 33.8 | Plus |
| CG9289-PA | 674 | CG9289-PA | 38..601 | 23..590 | 790 | 33.9 | Plus |
| Est-Q-PA | 559 | CG7529-PA | 51..523 | 68..562 | 513 | 28.8 | Plus |
