Clone BO11267 Report

Search the DGRC for BO11267

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:112
Well:67
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO11267.pep: validated full length
Sequenced Size:973

Clone Sequence Records

BO11267.3prime Sequence

812 bp (693 high quality bases) assembled on 2006-04-19

> BO11267.3prime
ATGGTCTAGAAAGCTTGCTCTCTGTCTGTCTGGAAGTGATTCGAACTGCG
CTGTCTCGTCCTGTCCATTCCCTTGGTCATCGGTGGCTTTCTCAGGATTA
TAGTCGTAAAACACCTGCGAAGTATCGCCCTGGACATTCACATCGATTGG
CGCACCCACATCATCAATCGGTGCTGAGCTGAAATCGCCTCGTGGCGGGT
CCTTCGGACTGTCCACCATGATCTGAACTGTGGGCATCGCGCACGTGTCC
ATTGAGCTCTCTACCGAGCCCGTTGTGATGCGTATCTGAGGCGGCGGCTG
CTTGCTAAGCATGTCCAGGCCGACACCAAAACCATTTCCGTTGCCGCTCA
CGGACGGGCTGCTCTCATCCTCCTCCTTATACTCTTCGCTCTCGCGGTGT
ACCAGTACGTGGACCAGAGTTGCGTTGTCCGGACGCAGGCTCAGCGAGTG
CGGATGCGTCTGTTGCTCTGGCGACGGCCTGGTGACGATCACCTCGGGGG
CTGACGCCTCAGAGACAAAAGCGTTCTTGTTTACTCTTAAAGCGCTTTGT
GCTGACAAACCTCTTTCTAGGGGCGGTTTCTTGCGAATGAAACTAGAGGC
GCGCTTACGTGATGGAGCCGACCCACCCCCCACCGCCTGGTGTCGGTCGC
TTGTCGGAAGCGGAGGTGGCTGCTGGGCCACACCCAGTGGCTGGGGCGGT
GGCGGTGGAAGAGGCCGTGCCGGAAGTGGAGGCGGAGTTTGAGGTGGTGT
TGGTCGTGTTGTTCATTGCGGTTTTTCTATGGTACTGAAAGTGAGGTTAA
CCTGTCACCGAC

BO11267.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG18506-PA 942 CG18506-RA 307..939 651..19 3165 100 Minus
CG18506-PA 942 CG18506-RA 178..307 781..652 575 97.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:26:32
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8560..9351 812..19 3830 99 Minus
NaCP60E-RO 12475 CG34405-RO 9560..10351 812..19 3830 99 Minus
NaCP60E-RN 12573 CG34405-RN 9658..10449 812..19 3830 99 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24918141 512..19 2470 100 Minus
2R 25286936 2R 24917320..24917577 771..513 1200 98.5 Minus
Blast to na_te.dros performed on 2015-02-10 23:26:29 has no hits.

BO11267.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:02:34 Download gff for BO11267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 148..942 16..812 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:24:54 Download gff for BO11267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 148..942 16..812 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 20:01:28 Download gff for BO11267.3prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9658..10455 12..812 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:44:03 Download gff for BO11267.3prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9658..10455 12..812 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:44:03 Download gff for BO11267.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 24917648..24918147 12..512 99   Minus
2R 24917320..24917577 513..771 98 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 20:01:28 Download gff for BO11267.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20804843..20805100 513..771 98 -> Minus
arm_2R 20805171..20805670 12..512 99   Minus

BO11267.5prime Sequence

795 bp (690 high quality bases) assembled on 2006-04-19

> BO11267.5prime
GAAGTTATCAGTCGACATGCTCGTCTCAGGTGCCGACGAAGTAGTCAAGG
ATATAAAACAGCAAAACGACGAGCTGGGCAAACGCGGTAGCATTTTTGTG
GAAGCGCCTAGAGCAAGTCGTCGCCGAAGCTTTTATAATTTCTTTTTGCG
TCATCAGGATGCTGTCGATGACAGCTTAACCTCACCTTCAGTACATAGAA
AAACCGCAATGAACAACACGACCAACACCACCTCAAACTCCGCCTCCACC
TCCGGCACGGCCTCCTCCACCGCCACCGCCCCAGCCACTGGGTGTGGCCC
AGCAGCCACCTCCGCCTCCGACAGCGACCGACACCAGGCGGTGGGGGGTG
GGTCGGCTCCATCACGTAAGCGCGCCTCTAGTTTCATTCGCAAGAAACCG
CCCCTAGAAAGAGGTTTGTCAGCACAAAGCGCTTTAAGAGTAAACAAGAA
CGCTTTTGTCTCTGAGGCGTCAGCCCCCGAGGTGATCGTCACCAGGCCGT
CGCCAGAGCAACAGACGCATCCGCACTCGCTGAGCCTGCGTCCGGACAAC
GCAACTCTGGTCCACGTACTGGTACACCGCGAGAGCGAAGAGTATAAGGA
GGAGGATGAGAGCAGCCCGTCCGTGAGCGGCAACGGAAATGGTTTTGGTG
TCGGCCTGGACATGCTTAGCAAGCAGCCGCCGCCTCAGATACGCATCACA
ACGGGCTCGGTAGAGAGCTCAATGGACACGTGCGCGATGCCCACAGTTCA
GATCATGGTGGACAGTCCGAAAGACCCGCCACGAGGCGATTTCAG

BO11267.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG18506-PA 942 CG18506-RA 1..779 17..795 3870 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:19:26
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8413..9191 17..795 3880 99.9 Plus
NaCP60E-RO 12475 CG34405-RO 9413..10191 17..795 3880 99.9 Plus
NaCP60E-RN 12573 CG34405-RN 9511..10289 17..795 3880 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 05:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24917981 462..795 1655 99.7 Plus
2R 25286936 2R 24917320..24917577 204..461 1290 100 Plus
2R 25286936 2R 24916771..24916890 84..203 600 100 Plus
2R 25286936 2R 24915395..24915462 17..84 340 100 Plus
Blast to na_te.dros performed on 2015-02-10 05:19:21 has no hits.

BO11267.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:02:35 Download gff for BO11267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 1..779 17..795 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:24:55 Download gff for BO11267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 1..779 17..795 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:50:52 Download gff for BO11267.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10289 17..795 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 07:28:15 Download gff for BO11267.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10289 17..795 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 07:28:15 Download gff for BO11267.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24915395..24915462 17..84 100 -> Plus
2R 24916772..24916890 85..203 100 -> Plus
2R 24917320..24917577 204..461 100 -> Plus
2R 24917648..24917981 462..795 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:50:52 Download gff for BO11267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20802918..20802985 17..84 100 -> Plus
arm_2R 20804295..20804413 85..203 100 -> Plus
arm_2R 20804843..20805100 204..461 100 -> Plus
arm_2R 20805171..20805504 462..795 99   Plus

BO11267.complete Sequence

973 bp assembled on 2006-10-10

GenBank Submission: FJ632049

> BO11267.complete
GAAGTTATCAGTCGACATGCTCGTCTCAGGTGCCGACGAAGTAGTCAAGG
ATATAAAACAGCAAAACGACGAGCTGGGCAAACGCGGTAGCATTTTTGTG
GAAGCGCCTAGAGCAAGTCGTCGCCGAAGCTTTTATAATTTCTTTTTGCG
TCATCAGGATGCTGTCGATGACAGCTTAACCTCACCTTCAGTACATAGAA
AAACCGCAATGAACAACACGACCAACACCACCTCAAACTCCGCCTCCACC
TCCGGCACGGCCTCCTCCACCGCCACCGCCCCAGCCACTGGGTGTGGCCC
AGCAGCCACCTCCGCCTCCGACAGCGACCGACACCAGGCGGTGGGGGGTG
GGTCGGCTCCATCACGTAAGCGCGCCTCTAGTTTCATTCGCAAGAAACCG
CCCCTAGAAAGAGGTTTGTCAGCACAAAGCGCTTTAAGAGTAAACAAGAA
CGCTTTTGTCTCTGAGGCGTCAGCCCCCGAGGTGATCGTCACCAGGCCGT
CGCCAGAGCAACAGACGCATCCGCACTCGCTGAGCCTGCGTCCGGACAAC
GCAACTCTGGTCCACGTACTGGTACACCGCGAGAGCGAAGAGTATAAGGA
GGAGGATGAGAGCAGCCCGTCCGTGAGCGGCAACGGAAATGGTTTTGGTG
TCGGCCTGGACATGCTTAGCAAGCAGCCGCCGCCTCAGATACGCATCACA
ACGGGCTCGGTAGAGAGCTCAATGGACACGTGCGCGATGCCCACAGTTCA
GATCATGGTGGACAGTCCGAAGGACCCGCCACGAGGCGATTTCAGCTCAG
CACCGATTGATGATGTGGGTGCGCCAATCGATGTGAATGTCCAGGGCGAT
ACTTCGCAGGTGTTTTACGACTATAATCCTGAGAAAGCCACCGATGACCA
AGGGAATGGACAGGACGAGACAGCGCAGTTCGAATCACTTCCAGACAGAC
AGAGAGCAAGCTTTCTAGACCAT

BO11267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RI 8139 CG34405-PI 7198..8136 17..955 4695 100 Plus
NaCP60E-RH 8535 CG34405-PH 7594..8532 17..955 4695 100 Plus
NaCP60E-RG 8535 CG34405-PG 7594..8532 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8413..9351 17..955 4695 100 Plus
NaCP60E-RO 12475 CG34405-RO 9413..10351 17..955 4695 100 Plus
NaCP60E-RN 12573 CG34405-RN 9511..10449 17..955 4695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24918141 462..955 2470 100 Plus
2R 25286936 2R 24917320..24917577 204..461 1290 100 Plus
2R 25286936 2R 24916771..24916890 84..203 600 100 Plus
2R 25286936 2R 24915395..24915462 17..84 340 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:21:35 has no hits.

BO11267.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:33 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7525..8466 17..958 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:31:40 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7925..8869 17..962 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:27 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10449 17..957 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:33 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7925..8869 17..962 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:55 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10449 17..957 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:55 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24915395..24915462 17..84 100 -> Plus
2R 24916772..24916890 85..203 100 -> Plus
2R 24917320..24917577 204..461 100 -> Plus
2R 24917648..24918141 462..957 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:27 Download gff for BO11267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20802918..20802985 17..84 100 -> Plus
arm_2R 20804295..20804413 85..203 100 -> Plus
arm_2R 20804843..20805100 204..461 100 -> Plus
arm_2R 20805171..20805664 462..957 99   Plus

BO11267.pep Sequence

Translation from 16 to 973

> BO11267.pep
MLVSGADEVVKDIKQQNDELGKRGSIFVEAPRASRRRSFYNFFLRHQDAV
DDSLTSPSVHRKTAMNNTTNTTSNSASTSGTASSTATAPATGCGPAATSA
SDSDRHQAVGGGSAPSRKRASSFIRKKPPLERGLSAQSALRVNKNAFVSE
ASAPEVIVTRPSPEQQTHPHSLSLRPDNATLVHVLVHRESEEYKEEDESS
PSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMDTCAMPTVQIMVDS
PKDPPRGDFSSAPIDDVGAPIDVNVQGDTSQVFYDYNPEKATDDQGNGQD
ETAQFESLPDRQRASFLDH

BO11267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-PI 2712 CG34405-PI 2400..2712 1..313 1605 100 Plus
NaCP60E-PH 2844 CG34405-PH 2532..2844 1..313 1605 100 Plus
NaCP60E-PG 2844 CG34405-PG 2532..2844 1..313 1605 100 Plus
NaCP60E-PM 2896 CG34405-PM 2532..2844 1..313 1605 100 Plus
NaCP60E-PK 2833 CG34405-PK 2537..2833 1..313 1500 94.6 Plus