Clone BO11282 Report

Search the DGRC for BO11282

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:112
Well:82
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO11282.pep:
Sequenced Size:454

Clone Sequence Records

BO11282.3prime Sequence

452 bp (451 high quality bases) assembled on 2006-04-19

> BO11282.3prime
ATGGTCTAGAAAGCTTGCAATCGTTTCATGTATTAGAATCATCGGCATAA
GTATTGGGGTTGCTTTCCGGTATTCCAGAAGTGTAAATAAATGTATATTC
AATGAAGATTTTCCATATAAGGGATAATCAGGGATGCGTATTTTTGGAGG
CGTGATTACGCTGATCACGCCACCTAAGTATATCAGCTTTGAACTATCAA
TAAATGGAGTGACACGCATGTATATGGAATGCGATGGCTGACCAATTGCC
GAAAAATTAAACCGAGGATCCCTCGCCGCCGTCAGAAATTCCCGCGCTGC
AGTCCTAAACTCCCACGCTGCCGTCAAAAAAGGTCCCACGCCGCCGTCCA
ATCTTATAAGAATCCCGCGCCGCTGTCCAGAACCTCGATCCCTCGCTGCA
GTCCCGATCTCCGTCTCCCACGCCGCAGTCATCTCCATGTCGACTGATAA
CT

BO11282.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 14:20:37 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 22:42:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 230515..230934 438..19 2100 100 Minus
Blast to na_te.dros performed on 2015-02-11 22:42:35 has no hits.

BO11282.3prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:14 Download gff for BO11282.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 230505..230938 14..452 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:14 Download gff for BO11282.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 230505..230938 14..452 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 07:48:29 Download gff for BO11282.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 230505..230938 14..452 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 07:48:29 Download gff for BO11282.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 230505..230938 14..452 98   Minus

BO11282.5prime Sequence

452 bp (451 high quality bases) assembled on 2006-04-19

> BO11282.5prime
GAAGTTATCAGTCGACATGGAGATGACTGCGGCGTGGGAGACGGAGATCG
GGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATA
AGATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAG
GACTGCAGCGCGGGAATTTCTGACGGCGGCGAGGGATCCTCGGTTTAATT
TTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCA
TTTATTGATAGTTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAAT
CACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATGGAAAATCTT
CATTGAATATACATTTATTTACACTTCTGGAATACCGGAAAGCAACCCCA
ATACTTATGCCGATGATTCTAATACATGAAACGATTGCAAGCTTTCTAGA
CC

BO11282.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 14:20:37 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 22:08:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 230515..230934 17..436 2100 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:08:35 has no hits.

BO11282.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:35 Download gff for BO11282.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 230503..230938 1..441 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:35 Download gff for BO11282.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 230503..230938 1..441 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:54:48 Download gff for BO11282.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 230503..230938 1..441 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:54:48 Download gff for BO11282.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 230503..230938 1..441 98   Plus

BO11282.complete Sequence

454 bp assembled on 2006-10-10

> BO11282.complete
GAAGTTATCAGTCGACATGGAGATGACTGCGGCGTGGGAGACGGAGATCG
GGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATA
AGATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAG
GACTGCAGCGCGGGAATTTCTGACGGCGGCGAGGGATCCTCGGTTTAATT
TTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCA
TTTATTGATAGTTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAAT
CACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATGGAAAATCTT
CATTGAATATACATTTATTTACACTTCTGGAATACCGGAAAGCAACCCCA
ATACTTATGCCGATGATTCTAATACATGAAACGATTGCAAGCTTTCTAGA
CCAT

BO11282.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:46:03 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 13:46:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 230515..230934 17..436 2100 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:46:02 has no hits.

BO11282.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:50:36 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:28 Download gff for BO11282.complete
Subject Subject Range Query Range Percent Splice Strand
3L 230515..230934 17..438 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:28 Download gff for BO11282.complete
Subject Subject Range Query Range Percent Splice Strand
3L 230515..230934 17..438 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:18 Download gff for BO11282.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 230515..230934 17..438 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:18 Download gff for BO11282.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 230515..230934 17..438 99   Plus

BO11282.pep Sequence

Translation from 16 to 454

> BO11282.pep
MEMTAAWETEIGTAARDRGSGQRRGILIRLDGGVGPFLTAAWEFRTAARE
FLTAARDPRFNFSAIGQPSHSIYMRVTPFIDSSKLIYLGGVISVITPPKI
RIPDYPLYGKSSLNIHLFTLLEYRKATPILMPMILIHETIASFLDH
Sequence BO11282.pep has no blast hits.