Clone Sequence Records
BO11282.3prime Sequence
452 bp (451 high quality bases) assembled on 2006-04-19
> BO11282.3prime
ATGGTCTAGAAAGCTTGCAATCGTTTCATGTATTAGAATCATCGGCATAA
GTATTGGGGTTGCTTTCCGGTATTCCAGAAGTGTAAATAAATGTATATTC
AATGAAGATTTTCCATATAAGGGATAATCAGGGATGCGTATTTTTGGAGG
CGTGATTACGCTGATCACGCCACCTAAGTATATCAGCTTTGAACTATCAA
TAAATGGAGTGACACGCATGTATATGGAATGCGATGGCTGACCAATTGCC
GAAAAATTAAACCGAGGATCCCTCGCCGCCGTCAGAAATTCCCGCGCTGC
AGTCCTAAACTCCCACGCTGCCGTCAAAAAAGGTCCCACGCCGCCGTCCA
ATCTTATAAGAATCCCGCGCCGCTGTCCAGAACCTCGATCCCTCGCTGCA
GTCCCGATCTCCGTCTCCCACGCCGCAGTCATCTCCATGTCGACTGATAA
CT
BO11282.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 14:20:37 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 22:42:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:42:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230515..230934 | 438..19 | 2100 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:42:35 has no hits.
BO11282.3prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:14 Download gff for
BO11282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230505..230938 | 14..452 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:14 Download gff for
BO11282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230505..230938 | 14..452 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 07:48:29 Download gff for
BO11282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230505..230938 | 14..452 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 07:48:29 Download gff for
BO11282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230505..230938 | 14..452 | 98 | | Minus |
BO11282.5prime Sequence
452 bp (451 high quality bases) assembled on 2006-04-19
> BO11282.5prime
GAAGTTATCAGTCGACATGGAGATGACTGCGGCGTGGGAGACGGAGATCG
GGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATA
AGATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAG
GACTGCAGCGCGGGAATTTCTGACGGCGGCGAGGGATCCTCGGTTTAATT
TTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCA
TTTATTGATAGTTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAAT
CACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATGGAAAATCTT
CATTGAATATACATTTATTTACACTTCTGGAATACCGGAAAGCAACCCCA
ATACTTATGCCGATGATTCTAATACATGAAACGATTGCAAGCTTTCTAGA
CC
BO11282.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 14:20:37 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 22:08:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:08:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230515..230934 | 17..436 | 2100 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:08:35 has no hits.
BO11282.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:35 Download gff for
BO11282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230503..230938 | 1..441 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:35 Download gff for
BO11282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230503..230938 | 1..441 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:54:48 Download gff for
BO11282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230503..230938 | 1..441 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:54:48 Download gff for
BO11282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230503..230938 | 1..441 | 98 | | Plus |
BO11282.complete Sequence
454 bp assembled on 2006-10-10
> BO11282.complete
GAAGTTATCAGTCGACATGGAGATGACTGCGGCGTGGGAGACGGAGATCG
GGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATA
AGATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAG
GACTGCAGCGCGGGAATTTCTGACGGCGGCGAGGGATCCTCGGTTTAATT
TTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCA
TTTATTGATAGTTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAAT
CACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATGGAAAATCTT
CATTGAATATACATTTATTTACACTTCTGGAATACCGGAAAGCAACCCCA
ATACTTATGCCGATGATTCTAATACATGAAACGATTGCAAGCTTTCTAGA
CCAT
BO11282.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:46:03 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 13:46:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:46:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230515..230934 | 17..436 | 2100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:46:02 has no hits.
BO11282.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:50:36 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:28 Download gff for
BO11282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230515..230934 | 17..438 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:28 Download gff for
BO11282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230515..230934 | 17..438 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:18 Download gff for
BO11282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230515..230934 | 17..438 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:18 Download gff for
BO11282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230515..230934 | 17..438 | 99 | | Plus |
BO11282.pep Sequence
Translation from 16 to 454
> BO11282.pep
MEMTAAWETEIGTAARDRGSGQRRGILIRLDGGVGPFLTAAWEFRTAARE
FLTAARDPRFNFSAIGQPSHSIYMRVTPFIDSSKLIYLGGVISVITPPKI
RIPDYPLYGKSSLNIHLFTLLEYRKATPILMPMILIHETIASFLDH
Sequence BO11282.pep has no blast hits.