Clone BO11359 Report

Search the DGRC for BO11359

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:113
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG14764-RA
Protein status:BO11359.pep: validated full length
Sequenced Size:1345

Clone Sequence Records

BO11359.3prime Sequence

840 bp (775 high quality bases) assembled on 2006-04-19

> BO11359.3prime
ATGGTCTAGAAAGCTTGCGTCGTCCGTGAAAGGATGGTCGGAGGTTTCGC
TGCTGTTGCGCCGCCTGCTCTCCAGTATACGGGTCGCCTGCTCCAGGCTT
TCCTTGTAGAATATGTTACGCGGACTGTCGCCGGGCAGCGAGTATTCAGA
GGTGTCCATTTGGAAAGTTAGGCCCAGCACGATGTTGAAGGCGGACGCAT
CGTAGCCGTGGCAGCCAGAGTATCGGAACATCGGCTTCTTGTTGAACTTG
CAGCCATTCGATTGGGCACCGATCGGATCGATGCACTCGAGGGTGAGGCA
GCACTTCAGCCAGGGAAGCATGATCTTCTCGGCCACCAAGGAGCTGTCCG
AGAAGAAGACAGCATCCAGGTCGACCATCCGAAGAAAGTTAAACTCCTCA
GCTTTCGACTCAAAGTAGTCGAACATTTTTGGATGCGTCAGAGAGGATAC
CGCCGTCGCTGTGTTCCATCCGAGCACTCCAGCGGACTTGACTGCAGATT
TTCCCACTCCTGGATTCATAACGATGCTCTGCAGACTTCGCAGCTGGGCG
GAACCTCCGCGCACGCGCATGCTGTTTTCCAAGAAGAGAACCGATCGGGC
ACGCATAAGACCGTCCTTAATTACAATGGGCCGGTAGGCGTGCGTCCGCT
GATCGGCGACGAAGGAGGGAAACTCCGACAGATCATAGGTGATCACCGAG
CATCGGCTGTTATTACAGTAAGCGCCCAAATCCCGTAGTTGCTCCTCGGA
AACGCCCAAATCGTAGATTAGCAGGTACTCGCTGGGAAGCTTGGCGGCAA
TATTCTGGGGCCAGCAGGATGGCCGATGCGGCCTGCCCCT

BO11359.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PA 1314 CG14764-RA 521..1311 809..19 3930 99.8 Minus
CG14764-PA 1314 CG14764-RA 491..523 840..808 165 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 17:12:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 2272 CG14764-RC 857..1677 840..19 4070 99.8 Minus
CG14764-RA 2742 CG14764-RA 1327..2147 840..19 4070 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 17:12:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7947602..7948174 267..840 2805 99.7 Plus
2R 25286936 2R 7942638..7942889 19..270 1260 100 Plus
Blast to na_te.dros performed on 2015-02-03 17:12:43 has no hits.

BO11359.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:04:40 Download gff for BO11359.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 491..1314 16..840 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:27:45 Download gff for BO11359.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 491..1314 16..840 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:33:18 Download gff for BO11359.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 1327..2153 12..840 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 19:00:17 Download gff for BO11359.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 1327..2153 12..840 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 19:00:17 Download gff for BO11359.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7942632..7942888 12..269 98 <- Plus
2R 7947605..7948174 270..840 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:33:18 Download gff for BO11359.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3830137..3830393 12..269 98 <- Plus
arm_2R 3835110..3835679 270..840 99   Plus

BO11359.5prime Sequence

891 bp (765 high quality bases) assembled on 2006-04-19

> BO11359.5prime
GAAGTTATCAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCG
GAGTGATAATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAG
CCGAACGATTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAA
AGAGTTCCAGGAAAACCTCCGCGTTGGCTTGGAACGCAAAAAGCTCGAAA
TAGACCCAAAGTATTTGCTTCTTCTGGGCTTCACCTCGTCAAATGAAGCT
ACAGGCCAACAGCAGCAGCTGGATCAGCAAAATGTGGTGGACATCGGTTC
ACCAGGTCAGCAACTGCCAAAGACAGATTTTTCAGCGCCGGCTACAAAAG
CGGAACTGGAGCTCAGCGAACTGCGAGGTCTGCGGCGTCCACAGGATGCT
GTTACCTTCGGTAGTCAGGCAGGAGATCAAAAGGGGCAGCGGAAGCGGAT
CACGACGCCGTACAACGGTACAAAGAGCAACTTCACAATCGTCAGCTATG
TGCTGGAGGGGCAGGCCGCATCGGCCATCCTGCTGGCCCAGAATATTGCC
GCCAAGCTTCCCAGCGAGTACCTGCTAATCTACGATTTGGGCGTTTCCGA
GGAGCAACTACGGGATTTGGGCGCCTACTGTAATAACAGCCGATGCTCGG
TGATCACCTATGATCTGTCGGAGTTTCCCTCCTTCGTCGCCGATCAGCGG
ACGCACGCCTACCGGCCCATTGTAATTAAGGACGGTCTTATGCGTGCCCG
ATCGGTTCTCTTCTTGGAAAACAGCATGCGCGTGCGCGGAGGTTCCGCCC
AGCTGCGAAGTCTGCAGAAGCATCGTTATGAATCCCGGAGGGGGAAAATC
TGCAGTCAAGTCCGCTGGAATGCTCGGATGGAACACAGCGA

BO11359.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PA 1314 CG14764-RA 1..802 17..818 4010 100 Plus
CG14764-PA 1314 CG14764-RA 802..874 819..891 290 95.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 2272 CG14764-RC 366..1240 16..891 4310 99.5 Plus
CG14764-RA 2742 CG14764-RA 836..1710 16..891 4310 99.5 Plus
CG14764-RB 1293 CG14764-RB 836..980 16..160 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7947791..7948523 891..158 3575 99.5 Minus
2R 25286936 2R 7953901..7954046 161..16 730 100 Minus
Blast to na_te.dros performed on 2015-02-11 16:18:52 has no hits.

BO11359.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:04:41 Download gff for BO11359.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 1..873 17..890 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:27:46 Download gff for BO11359.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 1..873 17..890 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:42:49 Download gff for BO11359.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 830..1709 10..890 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:16:57 Download gff for BO11359.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 830..1709 10..890 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:16:57 Download gff for BO11359.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7947792..7948520 161..890 99 <- Minus
2R 7953902..7954052 10..160 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:42:49 Download gff for BO11359.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3835297..3836025 161..890 99 <- Minus
arm_2R 3841407..3841557 10..160 98   Minus

BO11359.complete Sequence

1345 bp assembled on 2006-10-10

GenBank Submission: FJ632067

> BO11359.complete
GAAGTTATCAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCG
GAGTGATAATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAG
CCGAACGATTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAA
AGAGTTCCAGGAAAACCTCCGCGTTGGCTTGGAACGCAAAAAGCTCGAAA
TAGACCCAAAGTATTTGCTTCTTCTGGGCTTCACCTCGTCAAATGAAGCT
ACAGGCCAACAGCAGCAGCTGGATCAGCAAAATGTGGTGGACATCGGTTC
ACCAGGTCAGCAACTGCCAAAGACAGATTTTTCAGCGCCGGCTACAAAAG
CGGAACTGGAGCTCAGCGAACTGCGAGGTCTGCGGCGTCCACAGGATGCT
GTTACCTTCGGTAGTCAGGCAGGAGATCAAAAGGGGCAGCGGAAGCGGAT
CACGACGCCGTACAACGGTACAAAGAGCAACTTCACAATCGTCAGCTATG
TGCTGGAGGGGCAGGCCGCATCGGCCATCCTGCTGGCCCAGAATATTGCC
GCCAAGCTTCCCAGCGAGTACCTGCTAATCTACGATTTGGGCGTTTCCGA
GGAGCAACTACGGGATTTGGGCGCCTACTGTAATAACAGCCGATGCTCGG
TGATCACCTATGATCTGTCGGAGTTTCCCTCCTTCGTCGCCGATCAGCGG
ACGCACGCCTACCGGCCCATTGTAATTAAGGACGGTCTTATGCGTGCCCG
ATCGGTTCTCTTCTTGGAAAACAGCATGCGCGTGCGCGGAGGTTCCGCCC
AGCTGCGAAGTCTGCAGAGCATCGTTATGAATCCAGGAGTGGGAAAATCT
GCAGTCAAGTCCGCTGGAGTGCTCGGATGGAACACAGCGACGGCGGTATC
CTCTCTGACGCATCCAAAAATGTTCGACTACTTTGAGTCGAAAGCTGAGG
AGTTTAACTTTCTTCGGATGGTCGACCTGGATGCTGTCTTCTTCTCGGAC
AGCTCCTTGGTGGCCGAGAAGATCATGCTTCCCTGGCTGAAGTGCTGCCT
CACCCTCGAGTGCATCGATCCGATCGGTGCCCAATCGAATGGCTGCAAGT
TCAACAAGAAGCCGATGTTCCGATACTCTGGCTGCCACGGCTACGATGCG
TCCGCCTTCAACATCGTGCTGGGCCTAACTTTCCAAATGGACACCTCTGA
ATACTCGCTGCCCGGCGACAGTCCGCGTAACATATTCTACAAGGAAAGCC
TGGAGCAGGCGACCCGTATACTGGAGAGCAGGCGGCGCAACAGCAGCGAA
ACCTCCGACCATCCTTTCACGGACGACGCAAGCTTTCTAGACCAT

BO11359.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 1314 CG14764-PC 1..1311 17..1327 6555 100 Plus
CG14764-RA 1314 CG14764-PA 1..1311 17..1327 6555 100 Plus
CG14764-RB 303 CG14764-PB 1..144 17..160 720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 2272 CG14764-RC 366..1677 16..1327 6560 100 Plus
CG14764-RA 2742 CG14764-RA 836..2147 16..1327 6560 100 Plus
CG14764-RB 1293 CG14764-RB 836..980 16..160 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7947602..7948523 1079..158 4610 100 Minus
2R 25286936 2R 7942638..7942889 1327..1076 1260 100 Minus
2R 25286936 2R 7953901..7954046 161..16 730 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:29:20 has no hits.

BO11359.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:28 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 1..1314 17..1330 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:52:31 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 827..2137 17..1329 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:30:06 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 837..2147 17..1329 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:28 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 820..2143 10..1334 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:34 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 837..2147 17..1329 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:34 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7942635..7942888 1077..1329 99 <- Minus
2R 7947605..7948520 161..1076 100 <- Minus
2R 7953902..7954045 17..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:30:06 Download gff for BO11359.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3830140..3830393 1077..1329 99 <- Minus
arm_2R 3835110..3836025 161..1076 100 <- Minus
arm_2R 3841407..3841550 17..160 100   Minus

BO11359.pep Sequence

Translation from 16 to 1345

> BO11359.pep
MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQEN
LRVGLERKKLEIDPKYLLLLGFTSSNEATGQQQQLDQQNVVDIGSPGQQL
PKTDFSAPATKAELELSELRGLRRPQDAVTFGSQAGDQKGQRKRITTPYN
GTKSNFTIVSYVLEGQAASAILLAQNIAAKLPSEYLLIYDLGVSEEQLRD
LGAYCNNSRCSVITYDLSEFPSFVADQRTHAYRPIVIKDGLMRARSVLFL
ENSMRVRGGSAQLRSLQSIVMNPGVGKSAVKSAGVLGWNTATAVSSLTHP
KMFDYFESKAEEFNFLRMVDLDAVFFSDSSLVAEKIMLPWLKCCLTLECI
DPIGAQSNGCKFNKKPMFRYSGCHGYDASAFNIVLGLTFQMDTSEYSLPG
DSPRNIFYKESLEQATRILESRRRNSSETSDHPFTDDASFLDH

BO11359.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PC 437 CG14764-PC 1..437 1..437 2236 100 Plus
CG14764-PA 437 CG14764-PA 1..437 1..437 2236 100 Plus
CG14764-PB 100 CG14764-PB 1..52 1..52 246 94.2 Plus