Clone Sequence Records
BO11403.3prime Sequence
845 bp (808 high quality bases) assembled on 2006-04-19
> BO11403.3prime
ATGGTCTAGAAAGCTTGCGGGCTGTGGTTTTGTTGGGTCCAGTTCCGACT
CCCCGGGAGTGCTTTGGGTTTCATTTCTACTGCCGTAATCTTTAGCAGGT
CTGCGCTTTATGAATTCTGTATTGGAGGGCGCAGTCCGGAATGGTCCACG
AGAAGTTGGCGTCGGAGCTGGAGCCGACCCTGATTTCTTTTTGCTTAAGG
ATTCTTGTCTTGTAGAAGGAGATATGCCGTCGTGAGAGGGTGAAGGTGAC
TTTCTAGACGGACTGCGGGAGGCCGATGCCCTGGGAACTACACTCGGTGC
TGGAGCAGAGCCCGATCTCTTCCAAGCTGACGGTGATGCGCCATCATATG
CAGAAGCATCTGGTTCCCTATTTCGAGCAGCTGAATCTTCATCAACCAGA
TTAGGAGCTGGAGCCGAGCCGGACCGCTGCTTTCCACCCCTTGGAGGTCT
ACTTGGCAGACTGATCAGTGGCTTACGGGGTGCTGGACCTGTAGGAGCTA
TAGACGCAGATGGAGACGAATCGGATCTCTTTTTTCCTCCAGATTCGCCC
TTACCTGGTGGCGGCGACGAACCGCCCTTTGGTGGAGCGGCTGGTGGCTT
AGTACTGGGTTTCGATTGCGCATCCGCCTTGGCCTTTGCCTGCTGCTTCT
TGATCCGATCCTCGATTCGCTTCTTGTTCTCCGGCGTCAGCTCTCCGAAG
ATGCTTGTGATCAGGGCCTTGTACTCGTTGTAGTGCTGCACCTTGTTGCC
CGTCGCTGGCGAGGCGCTGGGCGGTCGTCCGTGATAGGACACGCAGCGCG
ATTCGTTTTCGTTCTTGAGGAGCGCCGTGTCGAAACGCGGCTGCA
BO11403.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:22:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-PD | 3849 | CG33791-RD | 3020..3846 | 845..19 | 4135 | 100 | Minus |
CG33791-PB | 3849 | CG33791-RB | 3020..3846 | 845..19 | 4135 | 100 | Minus |
CG33791-PA | 3717 | CG33791-RA | 3242..3714 | 491..19 | 2365 | 100 | Minus |
CG33791-PC | 3717 | CG33791-RC | 3242..3714 | 491..19 | 2365 | 100 | Minus |
CG33791-PA | 3717 | CG33791-RA | 2954..3246 | 845..553 | 1465 | 100 | Minus |
CG33791-PC | 3717 | CG33791-RC | 2954..3246 | 845..553 | 1465 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:56:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-RB | 5663 | CG33791-RB | 4780..5606 | 845..19 | 4135 | 100 | Minus |
CG33791-RD | 4018 | CG33791-RD | 3135..3961 | 845..19 | 4135 | 100 | Minus |
CG18170-RA | 5663 | CG18170-RA | 4780..5606 | 845..19 | 4135 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:56:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1616518..1617298 | 799..19 | 3905 | 100 | Minus |
3L | 28110227 | 3L | 1608243..1608289 | 845..799 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:56:31 has no hits.
BO11403.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:05:39 Download gff for
BO11403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32316-PB | 3021..3849 | 18..844 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:29:04 Download gff for
BO11403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-PB | 3021..3849 | 18..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:23:43 Download gff for
BO11403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RD | 3136..3967 | 10..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:41:56 Download gff for
BO11403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18170-RA | 4781..5612 | 10..844 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:41:56 Download gff for
BO11403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1608244..1608288 | 800..844 | 100 | -> | Minus |
3L | 1616518..1617304 | 10..799 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:23:43 Download gff for
BO11403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1608244..1608288 | 800..844 | 100 | -> | Minus |
arm_3L | 1616518..1617304 | 10..799 | 99 | | Minus |
BO11403.5prime Sequence
871 bp (755 high quality bases) assembled on 2006-04-19
> BO11403.5prime
GAAGTTATCAGTCGACATGAACCAATGTCGTCTGAGGAGCCTGGCGCGGA
TCAGGAGGAGCCTGACACTGGGTTTGCGGGGAACTGACCAACACGTCCTC
GCCCGTCAAGCCCTCCGCACCATTCAAACGACCTCACAGCGGCGAGGTGT
CCATGATCTGGACTCCTTCGCCAATGGATGCAGTGCCGCCTACATCGAGG
GACTCTACAACAAGTGGAAGCGCAATCCCAGTTCCGTAGATGAGTCCTGG
AACGAGCTCTTCAGCAGCAACGATTGGTCCAGCCCCAAGAGAAGTCCTCT
TCAGGTTTCGCACTCCCGGAAGTACAGACGTCCTCCGGTTGAAAGGATAG
CTGTGAAGGCTCGGTCGGGCGAAAGGACGGCTTCCGGTGGCGCATCTGCA
GCTCCAGCCGCACCTCCCAGCGACTGGAAGAACATTGATGACCACCACGT
GATCCAGGCCATCATCCGTGCCTATCAATCGCGCGGTCACTTGGCCGCCG
ATCTGGATCCCTTGGGTATTGTTGGTCCGAAGAAGCGTACGTCGGTGGAT
GGCACCCAGCGACATGCCGCCAGGGAGGTGCTCCGCCAGCACTTCTCCTA
TATATTTAATGACCTCAATACCGTGTTCAAGTTGCCCTCATCCACAATGA
TAGGCGGTGATCAGGAATTTCTGTCACTAAAAGAGATCCTGGATCGCTTG
GAGCGCATCTATTGCGGCCACATTGGAGTGGAGTACATGCAGATCACGTC
GTTGACAAAGACCAACTGGCTTCGCGACCGTTTCGAGAAGCTGGAGGCCT
GNACTTGACCAAGGAGGAAAAGAAGCTCATCCTAGAGCGTCTCACTCGCT
CGACGGGATTCAAAAACTTCC
BO11403.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:22:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-PD | 3849 | CG33791-RD | 1..775 | 17..791 | 3875 | 100 | Plus |
CG33791-PA | 3717 | CG33791-RA | 1..775 | 17..791 | 3875 | 100 | Plus |
CG33791-PB | 3849 | CG33791-RB | 1..775 | 17..791 | 3875 | 100 | Plus |
CG33791-PC | 3717 | CG33791-RC | 1..775 | 17..791 | 3875 | 100 | Plus |
CG33791-PD | 3849 | CG33791-RD | 776..856 | 791..871 | 361 | 97.5 | Plus |
CG33791-PA | 3717 | CG33791-RA | 776..856 | 791..871 | 361 | 97.5 | Plus |
CG33791-PB | 3849 | CG33791-RB | 776..856 | 791..871 | 361 | 97.5 | Plus |
CG33791-PC | 3717 | CG33791-RC | 776..856 | 791..871 | 361 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:51:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-RF | 5540 | CG33791-RF | 1759..2616 | 15..871 | 4239 | 99.7 | Plus |
CG33791-RE | 3895 | CG33791-RE | 114..971 | 15..871 | 4239 | 99.7 | Plus |
CG33791-RC | 5531 | CG33791-RC | 1759..2616 | 15..871 | 4239 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:51:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1605157..1605522 | 243..608 | 1830 | 100 | Plus |
3L | 28110227 | 3L | 1604827..1605056 | 15..244 | 1150 | 100 | Plus |
3L | 28110227 | 3L | 1605721..1605911 | 682..871 | 879 | 98.4 | Plus |
3L | 28110227 | 3L | 1605589..1605661 | 609..681 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:51:53 has no hits.
BO11403.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:05:40 Download gff for
BO11403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32316-PD | 1..856 | 17..871 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:29:05 Download gff for
BO11403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-PB | 1..856 | 17..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:38:59 Download gff for
BO11403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RF | 1759..2616 | 15..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:26:08 Download gff for
BO11403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RC | 1759..2616 | 15..871 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:26:08 Download gff for
BO11403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1604827..1605056 | 15..244 | 100 | -> | Plus |
3L | 1605159..1605522 | 245..608 | 100 | -> | Plus |
3L | 1605589..1605661 | 609..681 | 100 | -> | Plus |
3L | 1605721..1605911 | 682..871 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:38:59 Download gff for
BO11403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1604827..1605056 | 15..244 | 100 | -> | Plus |
arm_3L | 1605159..1605522 | 245..608 | 100 | -> | Plus |
arm_3L | 1605589..1605661 | 609..681 | 100 | -> | Plus |
arm_3L | 1605721..1605911 | 682..871 | 98 | | Plus |
BO11403.complete Sequence
3880 bp assembled on 2008-01-17
GenBank Submission: FJ632074
> BO11403.complete
GAAGTTATCAGTCGACATGAACCAATGTCGTCTGAGGAGCCTGGCGCGGA
TCAGGAGGAGCCTGACACTGGGTTTGCGGGGAACTGACCAACACGTCCTC
GCCCGTCAAGCCCTCCGCACCATTCAAACGACCTCACAGCGGCGAGGTGT
CCATGATCTGGACTCCTTCGCCAATGGATGCAGTGCCGCCTACATCGAGG
GACTCTACAACAAGTGGAAGCGCAATCCCAGTTCCGTAGATGAGTCCTGG
AACGAGCTCTTCAGCAGCAACGATTGGTCCAGCCCCAAGAGAAGTCCTCT
TCAGGTTTCGCACTCCCGGAAGTACAGACGTCCTCCGGTTGAAAGGATAG
CTGTGAAGGCTCGGTCGGGCGAAAGGACGGCTTCCGGTGGCGCATCTGCA
GCTCCAGCCGCACCTCCCAGCGACTGGAAGAACATTGATGACCACCACGT
GATCCAGGCCATCATCCGTGCCTATCAATCGCGCGGTCACTTGGCCGCCG
ATCTGGATCCCTTGGGTATTGTTGGTCCGAAGAAGCGTACGTCGGTGGAT
GGCACCCAGCGACATGCCGCCAGGGAGGTGCTCCGCCAGCACTTCTCCTA
TATATTTAATGACCTCAATACCGTGTTCAAGTTGCCCTCATCCACAATGA
TAGGCGGTGATCAGGAATTTCTGTCACTAAAAGAGATCCTGGATCGCTTG
GAGCGCATCTATTGCGGCCACATTGGAGTGGAGTACATGCAGATCACGTC
GTTGACAAAGACCAACTGGCTTCGCGACCGTTTCGAGAAGCCTGGAGGCC
TGGACTTGACCAAGGAGGAAAAGAAGCTCATCCTAGAGCGTCTCACTCGC
TCGACGGGATTCGAAAACTTCCTGGCGAAAAAGTTCTCGTCGGAGAAGCG
TTTCGGACTGGAGGGATGCGACATTATGATACCCGCTATAAAGGAGGTGG
TTGACCGGGCCACGGACCATGGCGTGGAGTCAATTTTAATAGGAATGGCG
CATCGAGGGCGCCTCAATGTCCTCGCCAACATCTGTCGCAAGCCCATTTC
GGACATCCTGTCTCAGTTCCACGGCTTGCAGGCCACCGATTCCGGATCTG
GCGACGTTAAGTACCATCTGGGCGTGTTTCAAGAGCGGCTCAACCGACAG
ACAAACCGCATGGTGCGCATCACCGTGGTGGCGAATCCCTCTCACTTGGA
GCACGTCAACCCGGTGCTCCTGGGTAAGGCCCGAGCGGAGATGTTCCAAC
GGGGCGACACATGTGGCAGCACGGTGATGCCCATCATTATCCACGGAGAT
GCCTCCTTTTCCGGTCAGGGCGTGGTCTACGAATCAATGCATCTGTCCGA
CTTGCCCAACTACACCACCTACGGCACCATTCACATTGTGTCCAACAACC
AGGTGGGCTTCACGACAGATCCGCGTTTCTCCCGCTCCTCGCGCTACTGC
ACGGACGTTGCCAAGGTGGTGAATGCTCCGATACTGCACGTGAATGCGGA
CGATCCGGAGGCGTGCATCCAGTGCGCTCGCATTGCCATCGACTATCGGA
CACGATTCAAGAAGGATGTGGTCATCGACATAGTTGGCTACCGACGCAAC
GGGCACAATGAGGCGGATGAACCCATGTTCACCCAGCCGCTGATGTACCA
GCGCATAAAAAAACTGAAGCCATGCCTCCAGCTCTACGCCGATAAGTTGA
TCAAGGAGGGAGTCGTCACGGATAGCGAGTTCAAGGCAATGGTGTCAAGC
TACGAAAAGATCTGCGAGGACGCTTGGGCCAAGTCCAAGACCATCAAGAC
CATAAAGTATTCCTCTTGGATCGACTCTCCCTGGCCAGGATTCTTCGAGG
GTCGCGATCGCCTGAAACTGTGCCCCACTGGCATCAGCACGGACACCCTG
AAGACGATTGGCAACATGTTCTCGACTCCTCCGCCGCCGGAGCACAAGTT
CGAGACACACAAGGGCATCCTTCGCATACTGGCCCAGCGCACGCAGATGG
TGCAGGACAAAGTGGCTGACTGGTCGCTGGGCGAGGCCTTCGCCTTCGGC
TCGCTCCTTAAGGAGGGCATCCACGTTCGACTATCCGGCCAAGATGTGGA
GCGCGGCACCTTTTCGCACCGGCACCACGTCCTGCACCACCAGTCGGAGG
ACAAGGTGGTGTACAACTCACTGGACCACCTCTATCCCGACCAGGCGCCC
TACTCCGTCTCCAACAGCTCCCTGTCGGAGTGTGCGGTCCTTGGCTTCGA
GCACGGCTACTCCATGGCCAGTCCCAATGCTCTGGTCATGTGGGAAGGCC
AGTTTGGGGACTTCTGCAACACGGCGCAGTGCATCATCGACACGTTCATA
GCCAGCGGCGAAACCAAGTGGGTGCGCCAGTCCGGAGTCGTCATGTTGCT
GCCACACAGCATGGAGGGCATGGGCCCGGAGCACTCTTCCGGCCGCATTG
AGCGCTTCCTGCAGATGAGCGACGACGATCCGGACGTCTATCCGGATACC
TGCGACGCTGACTTTGTGGCTCGCCAGCTAATGAATGTCAACTGGATTGT
GACGAATCTCTCCACGCCCGCAAATCTGTTCCACTGCCTGCGCCGCCAGG
TGAAGATGGGCTTCCGGAAGCCGCTGATTAACTTCTCGCCCAAGTCACTG
CTCCGCCATCCGCTGGCGCGAAGTCCCTTCAAGGACTTCAACGAGTGCAG
TTGCTTCCAGCGCATCATTCCCGACAAAGGACCCGCCGGCAAGCAGCCCG
ACTGCGTCCAGAAGCTGGTCTTCTGCTCGGGAAAGGTCTACTACGATCTC
GTCAAGGAGCGCGACGATCACGAGCAGGTGGAGACGGTGGCCCTGGTGAG
GGTGGAACAGGTGAGACGCCTCCCAACGCGACACCTCTTCTTGTTCATGA
TAACCATGATTGGGCGCATCCTCCAGCTCTGTCCCTTCCCCTACGACCTG
ATCAGCCAGCAGCTGGAGCTGTATCCCAAGGCGGAGCTGCTGTGGGCCCA
GGAGGAGCACAAGAACATGGGCGCCTGGTCTTACGTGCAGCCGCGTTTCG
ACACGGCGCTCCTCAAGAACGAAAACGAATCGCGCTGCGTGTCCTATCAC
GGACGACCGCCCAGCGCCTCGCCAGCGACGGGCAACAAGGTGCAGCACTA
CAACGAGTACAAGGCCCTGATCACAAGCATCTTCGGAGAGCTGACGCCGG
AGAACAAGAAGCGAATCGAGGATCGGATCAAGAAGCAGCAGGCAAAGGCC
AAGGCGGATGCGCAATCGAAACCCAGTACTAAGCCACCAGCCGCTCCACC
AAAGGGCGGTTCGTCGCCGCCACCAGGTAAGGGCGAATCTGGAGGAAAAA
AGAGATCCGATTCGTCTCCATCTGCGTCTATAGCTCCTACAGGTCCAGCA
CCCCGTAAGCCACTGATCAGTCTGCCAAGTAGACCTCCAAGGGGTGGAAA
GCAGCGGTCCGGCTCGGCTCCAGCTCCTAATCTGGTTGATGAAGATTCAG
CTGCTCGAAATAGGGAACCAGATGCTTCTGCATATGATGGCGCATCACCG
TCAGCTTGGAAGAGATCGGGCTCTGCTCCAGCACCGAGTGTAGTTCCCAG
GGCATCGGCCTCCCGCAGTCCGTCTAGAAAGTCACCTTCACCCTCTCACG
ACGGCATATCTCCTTCTACAAGACAAGAATCCTTAAGCAAAAAGAAATCA
GGGTCGGCTCCAGCTCCGACGCCAACTTCTCGTGGACCATTCCGGACTGC
GCCCTCCAATACAGAATTCATAAAGCGCAGACCTGCTAAAGATTACGGCA
GTAGAAATGAAACCCAAAGCACTCCCGGGGAGTCGGAACTGGACCCAACA
AAACCACAGCCCGCAAGCTTTCTAGACCAT
BO11403.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:40:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-RB | 3849 | CG33791-PB | 1..3846 | 17..3862 | 19230 | 100 | Plus |
CG33791-RD | 3849 | CG33791-PD | 1..3846 | 17..3862 | 19230 | 100 | Plus |
CG33791-RF | 3726 | CG33791-PF | 1..2844 | 17..2860 | 14220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:41:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-RB | 5663 | CG33791-RB | 1759..5606 | 15..3862 | 19240 | 100 | Plus |
CG33791-RD | 4018 | CG33791-RD | 114..3961 | 15..3862 | 19240 | 100 | Plus |
CG18170-RA | 5663 | CG18170-RA | 1759..5606 | 15..3862 | 19240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:40:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1607170..1608289 | 1963..3082 | 5600 | 100 | Plus |
3L | 28110227 | 3L | 1606083..1606900 | 990..1807 | 4090 | 100 | Plus |
3L | 28110227 | 3L | 1616518..1617298 | 3082..3862 | 3905 | 100 | Plus |
3L | 28110227 | 3L | 1605157..1605522 | 243..608 | 1830 | 100 | Plus |
3L | 28110227 | 3L | 1605721..1606032 | 682..993 | 1560 | 100 | Plus |
3L | 28110227 | 3L | 1604827..1605056 | 15..244 | 1150 | 100 | Plus |
3L | 28110227 | 3L | 16963904..16964392 | 1997..2485 | 915 | 79.1 | Plus |
3L | 28110227 | 3L | 1606958..1607115 | 1806..1963 | 790 | 100 | Plus |
3L | 28110227 | 3L | 16963122..16963361 | 1273..1512 | 390 | 77.5 | Plus |
3L | 28110227 | 3L | 1605589..1605661 | 609..681 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:40:57 has no hits.
BO11403.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:58:21 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RB | 1..3849 | 17..3863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:36:50 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RB | 1761..5606 | 17..3864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:49 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RD | 116..3961 | 17..3864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:58:22 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33791-RB | 1759..5612 | 15..3871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:40 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18170-RA | 1761..5606 | 17..3864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:40 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1604829..1605056 | 17..244 | 100 | -> | Plus |
3L | 1605159..1605522 | 245..608 | 100 | -> | Plus |
3L | 1605589..1605661 | 609..681 | 100 | -> | Plus |
3L | 1605721..1606031 | 682..992 | 100 | -> | Plus |
3L | 1606086..1606900 | 993..1807 | 100 | -> | Plus |
3L | 1606960..1607114 | 1808..1962 | 100 | -> | Plus |
3L | 1607170..1608288 | 1963..3081 | 100 | -> | Plus |
3L | 1616518..1617298 | 3082..3864 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:49 Download gff for
BO11403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1606960..1607114 | 1808..1962 | 100 | -> | Plus |
arm_3L | 1604829..1605056 | 17..244 | 100 | -> | Plus |
arm_3L | 1605159..1605522 | 245..608 | 100 | -> | Plus |
arm_3L | 1605589..1605661 | 609..681 | 100 | -> | Plus |
arm_3L | 1605721..1606031 | 682..992 | 100 | -> | Plus |
arm_3L | 1606086..1606900 | 993..1807 | 100 | -> | Plus |
arm_3L | 1607170..1608288 | 1963..3081 | 100 | -> | Plus |
arm_3L | 1616518..1617298 | 3082..3864 | 99 | | Plus |
BO11403.pep Sequence
Translation from 16 to 3880
> BO11403.pep
MNQCRLRSLARIRRSLTLGLRGTDQHVLARQALRTIQTTSQRRGVHDLDS
FANGCSAAYIEGLYNKWKRNPSSVDESWNELFSSNDWSSPKRSPLQVSHS
RKYRRPPVERIAVKARSGERTASGGASAAPAAPPSDWKNIDDHHVIQAII
RAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFSYIFNDL
NTVFKLPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTN
WLRDRFEKPGGLDLTKEEKKLILERLTRSTGFENFLAKKFSSEKRFGLEG
CDIMIPAIKEVVDRATDHGVESILIGMAHRGRLNVLANICRKPISDILSQ
FHGLQATDSGSGDVKYHLGVFQERLNRQTNRMVRITVVANPSHLEHVNPV
LLGKARAEMFQRGDTCGSTVMPIIIHGDASFSGQGVVYESMHLSDLPNYT
TYGTIHIVSNNQVGFTTDPRFSRSSRYCTDVAKVVNAPILHVNADDPEAC
IQCARIAIDYRTRFKKDVVIDIVGYRRNGHNEADEPMFTQPLMYQRIKKL
KPCLQLYADKLIKEGVVTDSEFKAMVSSYEKICEDAWAKSKTIKTIKYSS
WIDSPWPGFFEGRDRLKLCPTGISTDTLKTIGNMFSTPPPPEHKFETHKG
ILRILAQRTQMVQDKVADWSLGEAFAFGSLLKEGIHVRLSGQDVERGTFS
HRHHVLHHQSEDKVVYNSLDHLYPDQAPYSVSNSSLSECAVLGFEHGYSM
ASPNALVMWEGQFGDFCNTAQCIIDTFIASGETKWVRQSGVVMLLPHSME
GMGPEHSSGRIERFLQMSDDDPDVYPDTCDADFVARQLMNVNWIVTNLST
PANLFHCLRRQVKMGFRKPLINFSPKSLLRHPLARSPFKDFNECSCFQRI
IPDKGPAGKQPDCVQKLVFCSGKVYYDLVKERDDHEQVETVALVRVEQVR
RLPTRHLFLFMITMIGRILQLCPFPYDLISQQLELYPKAELLWAQEEHKN
MGAWSYVQPRFDTALLKNENESRCVSYHGRPPSASPATGNKVQHYNEYKA
LITSIFGELTPENKKRIEDRIKKQQAKAKADAQSKPSTKPPAAPPKGGSS
PPPGKGESGGKKRSDSSPSASIAPTGPAPRKPLISLPSRPPRGGKQRSGS
APAPNLVDEDSAARNREPDASAYDGASPSAWKRSGSAPAPSVVPRASASR
SPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPFRTAPSNTE
FIKRRPAKDYGSRNETQSTPGESELDPTKPQPASFLDH
BO11403.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:43:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33791-PB | 1282 | CG33791-PB | 1..1282 | 1..1282 | 6763 | 100 | Plus |
CG33791-PD | 1282 | CG33791-PD | 1..1282 | 1..1282 | 6763 | 100 | Plus |
CG33791-PF | 1241 | CG33791-PF | 1..1241 | 1..1282 | 6496 | 96.8 | Plus |
CG33791-PE | 1241 | CG33791-PE | 1..1241 | 1..1282 | 6496 | 96.8 | Plus |
CG33791-PC | 1238 | CG33791-PC | 1..1238 | 1..1282 | 6477 | 96.6 | Plus |