Clone Sequence Records
BO11416.complete Sequence
4273 bp assembled on 2009-09-17
GenBank Submission: FJ632082
> BO11416.complete
GAAGTTATCAGTCGACATGGATGGTTCAAAGAAAACGCTGCTCATTAAAA
TAAGCGCGAACGGCACTTCGCATTTCTACACTCCGGTGGCGGGCTATCCT
GGCCCAGGACCTGCGGGCAATGGTCCACCACACTATCACTTGCCGCCACC
ACCGCCGCCGCAACAGCAGCAGCAGCAGCCACCACAACAACCACAGCAGC
AGGCGCCACAAGGACCACCACCGCCACAGCAACAACAACAACAGCAGCAG
CAGGTGGCACCACCTGCGGTCCAAGGAGCACCAAGCACTGGAAGTGTAGG
AGCTGCCCAAGGAGCACCAGCCACTGCGACAGCCACCCATACACACGCCC
ATTCGCACTCCCACTCACACGCCCACTCGCACACACATCCCCAGCCACAT
GCACATTCCCCGCACTCGCCATCGCCGCCCAATTATCGGGATGAACGCAG
CCAGCGGCAGCACAACAAGCTGCTCCGGAAGCTGGAGAAGCAGCGGGAGT
CAAATCCCCCGCATTCGCCATCTCCACGTCGTGCCAACGAACTGAATGGT
CACAATAATAACAACATTCCTCCGGGTGTGCCCCTGCCCGGTCACCTCAA
TAACCACCATCATGCAGTGAACCATCAAGGACGTCGCCTGCCGCAGCAGC
ACCAAGGGCAGGCCCATCAGGTGGCACAGCAGCAACAGTCGCAGGCCAGG
AACGGGAATCCGCAGCATCCCCAGAGAGCCGGCAGCAGTGTGGGTGGCGC
CAGCTCCGTGGGAACTTCCGAGGATGGCGAGGATAACTCCAGTCTGGCCG
GCGATGATGAGGAGGAGTACCATCGCGAGAACAGCATCATTGAGCAAATC
TCAGCTATTGAAAAACCTGAGGTAATCGATGTGACTTCGCGGGCGGCCAA
GATAATTTGGGAGAGTCCAGCCATTGCGAATACAGTGACGGTGGATATGC
GGCAGCTCCGGTACCAAGTGCTCCTCTGTGATTCTGGAAAGCAGTGCAAG
TACAAGAGCTTGTACCAAGGCGAGGCCTACGAGTGCATTGTGCAAGACCT
GCAGCCGGGTCAGGATTACCTAGTCCGCTTGCAGGTGCACTACCAAAAAC
TTACGGGAACAGTGAGTGATCCCACAGAATTTCGGACGCCACCCTGTGAG
CCAGACCAACCGCCGCCTCCGAAACTGGTTTCCCGGACCAAGAACTCCAT
AAACCTTCGATGGGCTGCTCCGGCAGCAAACGGCGCCAGCATACAGCACT
ATCTGCTGGAATACGATGAGGGCAGGATGCCGGGACAACCGCAAAAGTTT
GTGGAGTTGGCCAAGATCAAGGCCAAGCACTATGTCATTGGAAAACTGCA
GCCGACTACGGTCTACAGTTTCCGTTTGGCAGCGGTTAATGAAGCGGGTC
AGAGTCCCTATTCTCCGGTGGCCAGCTACAGCACCTCCGGAAATCCTCCG
CCAGTGCCTAAACCACCTCAGCTGCTGGCCAGCAGTTCCAGTTCCCTAAA
ACTGGGCTGGGAGCGGCGGGCTCAAGATGGTGACTTCCTGCTGCAACTAC
AAGATGCAGAAACAGGTCATGGTTTCCTCAATACCTACAAGGGTACAGAG
CTGCAAACGGAGTGCCTGCAATTAAGGCGGGCTAGCAGCTACCAATTCCG
TCTGAGATCCGAAAACGAAGCCGGTTTTTCACCCTGGTCACCGGAGGTTA
GCTACCGCACTTTAGCGGAACGCCCGGGAAGGCCAGGGAAACCGCATGCC
AAGGGAAAGATTCATGGCACTCAGTTTAAGGCCCGCTGGGATGCACCCAG
CGATTCCGGTGGTGCTGAGATCCTGTGCTACCACTTGGAGTTAAGTGCCG
CTGGGCCAGCTTTCGAAAGGATCTACAGTGGCGCCGAAACAGAAGCCATG
TGCGAAAGACTTCAGCCGGGTACCACATACGCTCTGCGAGCCTGTTGCGA
AGGTCCAGCTGGTCAGAGTCCGTACTCCGATATAGGACACGTCACCACGG
AGGCGGTGCCACCATCTGCTCCGCCTCCACCGCATTGCAGTGATCCTCCC
TCGCCGTACGCCGCCCTACTGAAGCTCCGGCCTCCGGAATATAACGGTGG
AGCTCCGATCTTAGAGTTCGAAGCCCAGATGCGTCGCCTAGAGCAAGTGC
AGCCTCCGCAGTTGGTTTACCGCGGCAAGCAGACCTACTTTGTGGCGCAG
GATCTGACACCCGGTGGCATGTATGAAACCCAAGTAAGGGCCATTAACCG
GATTGGCGCCGGTAGCTGGTCCCAATGGATGAGATTTACGGCAGCAGCTG
CTGCTCCTGGAGTTCCCGAAGAGTTACGGGTTCTGGTGAAGTCGGCCACC
CACCTGGGTGTCAGCTGGCAACCGCCTTTACAGGAGAATGGTGCCCCAGT
GACCAGTTACACCCTAAAAAGTGCCAGCCAAGAAAGAAAGGAAGATGACT
CGGAGGAGGAGGTCAAAGAGCCGCCTAGCTCCGAATTCCACAACTGCTAT
CAGGGACCACAAACCTGCGCTGAACTGAGAAACCTTTCGCCCTACACACG
CTACCATTTCCGCATCCAGGCGAGCAACTCAGCCGGAACGGGAAACTCCT
CCGACGTGATAAGTGTATGTACGCCAGCCGCAGTTCCAGGAGCTCCTCAA
ATGCAGGGCTATGAGTTCACCGCCCAGGAGGTCACACTCAACTGGACCCA
GCCGGCGGCCCACGGCTCGCCCATATGCTCCTACAACATTGAGTACGGGG
AGAGAACTATCGCCACTCCGGACGCCTGTACACGCTATACTGTTAGTGGC
TTAATGCCGGAAACCGGCTACAAGTTCCGTGTTCAAGCGGTCAACGCCAT
TGGTGCCGGAGCTTTTAGTGCCTATGCTAAGCTGACCACCCAACCAGCTC
CTCCGGCACCACCTCGCTTAGAGTGCAGCGGTGCTGGCCACAATTACATA
AAGCTCAAGTGGGGTGAGAACGGAAACGGCAAAGTGGTAAACTCCAATCC
GTCTGGAAATGGAGGCGACTTTACCAAGTACTTTGTGGAGATGTATGTGG
CCAGAGCTAAGCAGTTCCAGGCCGTCTACTCTGGCACGAATTGTATGTGC
AAGGTGCACAAACTGCAAGAGCGAAGCAGCTACACTTTCCGGATTTATGC
CCATACCGATCGGGCTGGCGATGGGGATTACTCGGAGGAATTTGTTTTTG
AAACTTCGGCCACTCTGCCGGCGAACATAAAGCCTCCTCGTGTTGTCCAA
GAGGGAAGCGTATGCCTAATGGAGCTGCCTGGCCAACTGGGAATGCAACT
AACACTGGAGTGGCAGCACTCAAAGAACTCCTTCAATGATCGTGTGGAGT
ACGAATTGCAGTATGCAGTTTTGGGCGCAGCTGAATTGGAGGGCGAATCA
TTGTCGCCAAAAGGACGCAGCAGCAGTTCCAGTGGCAGCTCAAATGGAGC
GCCAATTAATTTGCCCAACCATGACTACAGGCAATTGTATCGCGGTCCAG
AGACCAAATTCACCATTGACAATCTGGCAGCTGGTACATGCTACCAGTTC
CGAGTGTGTCCAGTGCGGATAGCGGCTGGCGGAGAACTGCTGTACGGTCA
GCCGTCCAGTCCGTTGCGCTACCAGGTGCCCAGTGAACTGGATCCTAGCT
CGGCGACCTGTCATCACCACCTGCACGGCTCCACCGCAACACCGGCGATG
GCCTCCAGCCAGAGAAGCAGCCGAAAACTGTCCGCCGGCAATGGCTCAAC
CAACGGTCTGCACATGCGATCGGTAAGTGCGTCGGCAATAAGTGGAGCGA
GCGGCGTGGGAGCAGATCCCGTGGCAATTGGACGACTGCAGCAGGAGCTT
TCTGGTTTCAATGCCTGCGCAGATCCCCAGCATCACCATCATCATCATCA
CCACCACCACCATCAGCCGTGCGGTGGCGGCGTTGGAGGAGCCGGTGGAA
TATCCGGGGCAACGGACTCGCACCACCAGCATCAGCACCACATGCACCAC
TCACATCACATGCACCACGCCCACCATCCGCACACCGGAATGGGCGGTAG
CTCTTCGAACTCCAGCTCCTCAACGGCGGCGGCCATATCCTCCAGTTTGG
CCCAGGCGGGAGGATTAAGGCGGATCGTTTGTAAAGTTACTTCACTGTAC
TCCAACCGGAGGCGTCTTAGCGACCAACAAAAGGCCGTGTGCATTGTGGT
CTCCTTCCTAGTGGGCACTTTCCTGGTCGCCATGCTCGTAAATATGTTGA
GGGGCGCAAGCTTTCTAGACCAT
BO11416.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:42:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42389-RG | 4242 | CG42389-PG | 1..4239 | 17..4255 | 21180 | 100 | Plus |
CG42389-RH | 5340 | CG42389-PH | 1132..5337 | 50..4255 | 21015 | 100 | Plus |
CG42389-RF | 5289 | CG42389-PF | 1081..5286 | 50..4255 | 21015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42389-RG | 4759 | CG42389-RG | 301..4539 | 17..4255 | 21180 | 100 | Plus |
CG42389-RH | 7708 | CG42389-RH | 2060..6265 | 50..4255 | 21015 | 100 | Plus |
CG42389-RF | 6365 | CG42389-RF | 1923..6128 | 50..4255 | 21015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16658024..16661775 | 504..4255 | 18745 | 100 | Plus |
2L | 23513712 | 2L | 16657499..16657952 | 50..503 | 2270 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:42:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6858 | 603..737 | 145 | 62 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1057..1144 | 604..694 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2390 | 640..724 | 137 | 65.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6812..6913 | 638..738 | 129 | 62.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1082..1132 | 644..694 | 120 | 70.6 | Plus |
BO11416.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-17 15:20:23 Download gff for
BO11416.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RG | 283..4521 | 17..4257 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:55:09 Download gff for
BO11416.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RG | 301..4539 | 17..4257 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:05:52 Download gff for
BO11416.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31738-RA | 283..4521 | 17..4257 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:50 Download gff for
BO11416.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RG | 301..4539 | 17..4257 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:50 Download gff for
BO11416.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16657397..16657429 | 17..49 | 100 | -> | Plus |
2L | 16657499..16657952 | 50..503 | 100 | -> | Plus |
2L | 16658024..16661775 | 504..4257 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:55:09 Download gff for
BO11416.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16657397..16657429 | 17..49 | 100 | -> | Plus |
arm_2L | 16657499..16657952 | 50..503 | 100 | -> | Plus |
arm_2L | 16658024..16661775 | 504..4257 | 99 | | Plus |
BO11416.3prime Sequence
734 bp (682 high quality bases) assembled on 2006-04-19
> BO11416.3prime
ATGGTCTAGAAAGCTTGCGCCCCTCAACATATTTACGAGCATGGCGACCA
GGAAAGTGCCCACTAGGAAGGAGACCACAATGCACACGGCCTTTTGTTGG
TCGCTAAGACGCCTCCGGTTGGAGTACAGTGAAGTAACTTTACAAACGAT
CCGCCTTAATCCTCCCGCCTGGGCCAAACTGGAGGATATGGCCGCCGCCG
TTGAGGAGCTGGAGTTCGAAGAGCTACCGCCCATTCCGGTGTGCGGATGG
TGGGCGTGGTGCATGTGATGTGAGTGGTGCATGTGGTGCTGATGCTGGTG
GTGCGAGTCCGTTGCCCCGGATATTCCACCGGCTCCTCCAACGCCGCCAC
CGCACGGCTGATGGTGGTGGTGGTGATGATGATGATGGTGATGCTGGGGA
TCTGCGCAGGCATTGAAACCAGAAAGCTCCTGCTGCAGTCGTCCAATTGC
CACGGGATCTGCTCCCACGCCGCTCGCTCCACTTATTGCCGACGCACTTA
CCGATCGCATGTGCAGACCGTTGGTTGAGCCATTGCCGGCGGACAGTTTT
CGGCTGCTTCTCTGGCTGGAGGCCATCGCCGGTGTTGCGGTGGAGCCGTG
CAGGTGGTGATGACAGGTCGCCGAGCTAGGATCCAGTTCACTGGGCACCT
GGTAGCGCAACGGACTGGACGGCTGACCGTACAGCAGTTCTCCGCCAGCC
GCTATCCGCACTGGACACACTCGGAACTGGTAGC
BO11416.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:22:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31738-PB | 5103 | CG31738-RB | 4385..5100 | 734..19 | 3580 | 100 | Minus |
CG31738-PA | 4242 | CG31738-RA | 3524..4239 | 734..19 | 3580 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:20:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42389-RH | 7708 | CG42389-RH | 5550..6265 | 734..19 | 3580 | 100 | Minus |
CG42389-RG | 4759 | CG42389-RG | 3824..4539 | 734..19 | 3580 | 100 | Minus |
CG42389-RF | 6365 | CG42389-RF | 5413..6128 | 734..19 | 3580 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:20:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16661060..16661775 | 734..19 | 3580 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 12:20:38 has no hits.
BO11416.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:06:01 Download gff for
BO11416.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31738-PA | 3524..4242 | 15..734 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:29:34 Download gff for
BO11416.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31738-PA | 3524..4242 | 15..734 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 23:26:28 Download gff for
BO11416.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RF | 5499..6217 | 15..734 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:31:29 Download gff for
BO11416.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RF | 5413..6131 | 15..734 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:31:29 Download gff for
BO11416.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16661060..16661778 | 15..734 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 23:26:28 Download gff for
BO11416.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16661060..16661778 | 15..734 | 99 | | Minus |
BO11416.5prime Sequence
758 bp (711 high quality bases) assembled on 2006-04-19
> BO11416.5prime
GAAGTTATCAGTCGACATGGATGGTTCAAAGAAAACGCTGCTCATTAAAA
TAAGCGCGAACGGCACTTCGCATTTCTACACTCCGGTGGCGGGCTATCCT
GGCCCAGGACCTGCGGGCAATGGTCCACCACACTATCACTTGCCGCCACC
ACCGCCGCCGCAACAGCAGCAGCAGCAGCCACCACAACAACCACAGCAGC
AGGCGCCACAAGGACCACCACCGCCACAGCAACAACAACAACAGCAGCAG
CAGGTGGCACCACCTGCGGTCCAAGGAGCACCAAGCACTGGAAGTGTAGG
AGCTGCCCAAGGAGCACCAGCCACTGCGACAGCCACCCATACACACGCCC
ATTCGCACTCCCACTCACACGCCCACTCGCACACACATCCCCAGCCACAT
GCACATTCCCCGCACTCGCCATCGCCGCCCAATTATCGGGATGAACGCAG
CCAGCGGCAGCACAACAAGCTGCTCCGGAAGCTGGAGAAGCAGCGGGAGT
CAAATCCCCCGCATTCGCCATCTCCACGTCGTGCCAACGAACTGAATGGT
CACAATAATAACAACATTCCTCCGGGTGTGCCCCTGCCCGGTCACCTCAA
TAACCACCATCATGCAGTGAACCATCAAGGACGTCGCCTGCCGCAGCAGC
ACCAAGGGCAGGCCCATCAGGTGGCACAGCAGCAACAGTCGCAGGCCAGG
AACGGGAATCCGCAGCATCCCCAGAGAGCCGGCAGCAGTGTGGGTGGCGC
CAGCTCCG
BO11416.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:22:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31738-PA | 4242 | CG31738-RA | 1..742 | 17..758 | 3710 | 100 | Plus |
CG31738-PB | 5103 | CG31738-RB | 895..1603 | 50..758 | 3545 | 100 | Plus |
CG32133-PA | 6885 | CG32133-RA | 3504..3531 | 226..253 | 140 | 100 | Plus |
CG14441-PA | 3378 | CG14441-RA | 2853..2880 | 226..253 | 140 | 100 | Plus |
CG32133-PA | 6885 | CG32133-RA | 2497..2528 | 158..189 | 135 | 96.8 | Plus |
CG13830-PA | 1983 | CG13830-RA | 916..942 | 227..253 | 135 | 100 | Plus |
CG14801-PD | 2229 | CG14801-RD | 232..258 | 227..253 | 135 | 100 | Plus |
CG14801-PC | 2286 | CG14801-RC | 289..315 | 227..253 | 135 | 100 | Plus |
CG14801-PA | 2286 | CG14801-RA | 289..315 | 227..253 | 135 | 100 | Plus |
CG14801-PB | 2364 | CG14801-RB | 367..393 | 227..253 | 135 | 100 | Plus |
CG6700-PA | 2625 | CG6700-RA | 385..411 | 227..253 | 135 | 100 | Plus |
CG6118-PA | 2832 | CG6118-RA | 2163..2189 | 227..253 | 135 | 100 | Plus |
CG11172-PA | 4260 | NFAT-RA | 595..621 | 227..253 | 135 | 100 | Plus |
CG3696-PA | 15969 | kis-RA | 595..621 | 227..253 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42389-RG | 4759 | CG42389-RG | 301..1042 | 17..758 | 3710 | 100 | Plus |
CG42389-RH | 7708 | CG42389-RH | 2060..2768 | 50..758 | 3545 | 100 | Plus |
CG42389-RF | 6365 | CG42389-RF | 1923..2631 | 50..758 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:20:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16657499..16657952 | 50..503 | 2270 | 100 | Plus |
2L | 23513712 | 2L | 16658024..16658278 | 504..758 | 1275 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 22:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6858 | 603..737 | 145 | 62 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1057..1144 | 604..694 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2390 | 640..724 | 137 | 65.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6812..6913 | 638..738 | 129 | 62.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1082..1132 | 644..694 | 120 | 70.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6883 | 621..724 | 113 | 58.9 | Plus |
BO11416.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:06:02 Download gff for
BO11416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31738-PA | 1..742 | 17..758 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:29:36 Download gff for
BO11416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31738-PA | 1..742 | 17..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:38:34 Download gff for
BO11416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RG | 299..1042 | 14..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:09:44 Download gff for
BO11416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42389-RG | 299..1042 | 14..758 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:44 Download gff for
BO11416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16657395..16657429 | 14..49 | 97 | -> | Plus |
2L | 16657499..16657952 | 50..503 | 100 | -> | Plus |
2L | 16658024..16658278 | 504..758 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:38:34 Download gff for
BO11416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16657395..16657429 | 14..49 | 97 | -> | Plus |
arm_2L | 16657499..16657952 | 50..503 | 100 | -> | Plus |
arm_2L | 16658024..16658278 | 504..758 | 100 | | Plus |
BO11416.pep Sequence
Translation from 16 to 4273
> BO11416.pep
MDGSKKTLLIKISANGTSHFYTPVAGYPGPGPAGNGPPHYHLPPPPPPQQ
QQQQPPQQPQQQAPQGPPPPQQQQQQQQQVAPPAVQGAPSTGSVGAAQGA
PATATATHTHAHSHSHSHAHSHTHPQPHAHSPHSPSPPNYRDERSQRQHN
KLLRKLEKQRESNPPHSPSPRRANELNGHNNNNIPPGVPLPGHLNNHHHA
VNHQGRRLPQQHQGQAHQVAQQQQSQARNGNPQHPQRAGSSVGGASSVGT
SEDGEDNSSLAGDDEEEYHRENSIIEQISAIEKPEVIDVTSRAAKIIWES
PAIANTVTVDMRQLRYQVLLCDSGKQCKYKSLYQGEAYECIVQDLQPGQD
YLVRLQVHYQKLTGTVSDPTEFRTPPCEPDQPPPPKLVSRTKNSINLRWA
APAANGASIQHYLLEYDEGRMPGQPQKFVELAKIKAKHYVIGKLQPTTVY
SFRLAAVNEAGQSPYSPVASYSTSGNPPPVPKPPQLLASSSSSLKLGWER
RAQDGDFLLQLQDAETGHGFLNTYKGTELQTECLQLRRASSYQFRLRSEN
EAGFSPWSPEVSYRTLAERPGRPGKPHAKGKIHGTQFKARWDAPSDSGGA
EILCYHLELSAAGPAFERIYSGAETEAMCERLQPGTTYALRACCEGPAGQ
SPYSDIGHVTTEAVPPSAPPPPHCSDPPSPYAALLKLRPPEYNGGAPILE
FEAQMRRLEQVQPPQLVYRGKQTYFVAQDLTPGGMYETQVRAINRIGAGS
WSQWMRFTAAAAAPGVPEELRVLVKSATHLGVSWQPPLQENGAPVTSYTL
KSASQERKEDDSEEEVKEPPSSEFHNCYQGPQTCAELRNLSPYTRYHFRI
QASNSAGTGNSSDVISVCTPAAVPGAPQMQGYEFTAQEVTLNWTQPAAHG
SPICSYNIEYGERTIATPDACTRYTVSGLMPETGYKFRVQAVNAIGAGAF
SAYAKLTTQPAPPAPPRLECSGAGHNYIKLKWGENGNGKVVNSNPSGNGG
DFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRA
GDGDYSEEFVFETSATLPANIKPPRVVQEGSVCLMELPGQLGMQLTLEWQ
HSKNSFNDRVEYELQYAVLGAAELEGESLSPKGRSSSSSGSSNGAPINLP
NHDYRQLYRGPETKFTIDNLAAGTCYQFRVCPVRIAAGGELLYGQPSSPL
RYQVPSELDPSSATCHHHLHGSTATPAMASSQRSSRKLSAGNGSTNGLHM
RSVSASAISGASGVGADPVAIGRLQQELSGFNACADPQHHHHHHHHHHHQ
PCGGGVGGAGGISGATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSS
SSTAAAISSSLAQAGGLRRIVCKVTSLYSNRRRLSDQQKAVCIVVSFLVG
TFLVAMLVNMLRGASFLDH
BO11416.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:00:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42389-PG | 1413 | CG31738-PA | 1..1413 | 1..1413 | 7596 | 100 | Plus |
CG42389-PH | 1779 | CG42389-PH | 378..1779 | 12..1413 | 7543 | 100 | Plus |
CG42389-PF | 1762 | CG31738-PB | 361..1762 | 12..1413 | 7543 | 100 | Plus |
CG42389-PE | 2064 | CG42389-PE | 663..2064 | 12..1413 | 7543 | 100 | Plus |
Lar-PB | 2011 | CG10443-PB | 304..984 | 379..1063 | 320 | 22.1 | Plus |