Clone BO11422 Report

Search the DGRC for BO11422

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:114
Well:22
Vector:pDNR-Dual
Associated Gene/Transcriptlid-RA
Protein status:BO11422.pep: Imported from assembly
Sequenced Size:5548

Clone Sequence Records

BO11422.3prime Sequence

793 bp (714 high quality bases) assembled on 2006-04-19

> BO11422.3prime
ATGGTCTAGAAAGCTTGCCCGCGCCGATTGCACCGCCCGCTGCTTGCCCG
GCGTCGTCGTGGACGCCACGCTCATACTGTGACCGGAGCCCTGTGTTCCG
ATGGCAACTGTCTTTGTGCATCGAATGCAGATATAGTCGTCGTCGGGCTT
TATCTGGCTGCGATTGAGGCCCACACAGTACATGTGGAACCATTCGTTGC
AGCCGCCGTCGCACTGCACCCAGTCCACCTCTCGCCCGGTTGGCTTGTGG
CAGTTCTCCGCCCGGCACTCCTCCTCGTCGTCCTCCTGCGCCGCCTGTTG
AGACCGTTGCGCGTGCTTCTTCTGACCGCCAGTCGCATTATTGCCTCCAG
TAGCTGCTCCCTGGCCGCTGGTGGTGTTGCTGTTCAAATTGGTACTGCTG
TTGCTATTGTTCGTGCTGTTATTATTATTGTTGTTGTTATTATTGGTGGC
TGTGGTTGAGGTGCGCTTTCGCTTTTTGTGCGTCGAGCCGGGTGTGGGCG
TCGTCGTCGCAGAATTGCCACCACCTGATCCTGTACTGGAGTTCGTATTA
CCGCCGTTGGCCTGCTTATTCTCGGCATCGGCATCCGCACCCGGAGTGGT
GGATGCTGCTGGCGATGCCTTGGCATCGCTCTTGCGTGCCGCTGCCGCTG
ATCCCTTCTTGCCCGGTGTCTGCTTCGGTGTGCTCTGCTTCTTGCGCGGC
ACTGCCGAGTTGCCGCCGGTGTCGTTGGAGCGCCTCTTCTTGTTGCGTCC
GCTGTTGCTCGCAGAACCCGTTGCCCCGCCACTATTGCTGTTG

BO11422.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9088-PA 5517 lid-RA 4740..5514 793..19 3875 100 Minus
CG9088-PB 5517 lid-RB 4740..5514 793..19 3875 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:23:34
Subject Length Description Subject Range Query Range Score Percent Strand
lid-RF 7004 CG9088-RF 4985..5759 793..19 3875 100 Minus
lid-RE 6941 CG9088-RE 4985..5759 793..19 3875 100 Minus
lid-RD 5841 CG9088-RD 4863..5637 793..19 3875 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5990645..5991419 19..793 3875 100 Plus
Blast to na_te.dros performed 2015-02-10 22:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6688..6864 537..372 166 59.6 Minus

BO11422.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:06:12 Download gff for BO11422.3prime
Subject Subject Range Query Range Percent Splice Strand
lid-PB 4740..5517 18..793 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:29:51 Download gff for BO11422.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9088-PB 4740..5517 18..793 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:56:06 Download gff for BO11422.3prime
Subject Subject Range Query Range Percent Splice Strand
lid-RC 4873..5647 19..793 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:01:20 Download gff for BO11422.3prime
Subject Subject Range Query Range Percent Splice Strand
lid-RD 4863..5637 19..793 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:20 Download gff for BO11422.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5990645..5991419 19..793 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:56:06 Download gff for BO11422.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5990645..5991419 19..793 100   Plus

BO11422.5prime Sequence

822 bp (698 high quality bases) assembled on 2006-04-19

> BO11422.5prime
GAAGTTATCAGTCGACATGTCCGCCAAAACTGAGGCGGACAACACGACGG
CCGCCAACTCCGGCGGCGGAGGAGTCGGGAGCGGCACCTCATCCGGCGGG
GGCGCATCCGCGAATGGAACAGCAACTCCGGCACGTCGTCTGCGTACCCG
AAACTCAACGGGCAACGGGACTAATAGTGGAAGTGAGTCCGTAAAGAAAT
CCAATGCTAACGACGAGCCCTCGACCCCAGTCACCCCGGCAGGAGCAACA
GGATCTCACACCCATGCTCCGCCAGGCATTTCTCCGGCGGTAATGGAACG
GCCTATGCCCAGTGTTCCCATGAATCACGCCAGCAGCAGTGTGTCAGCCA
GCAAAAAGTACCATAATAGTTGTCCTCATCCCACGCCCACGCCTGCGCCC
ACTGGGCACAAGAAGTCGGTCCACACGCAGCCGCACAGCAGCAACAAGTT
TGACCAGGGAAAGAACGAGGAGTTCCACTTTGACACGCCGCCAGAGTGCC
CTGTGTTCCGGCCCACAACTGAGGAGTTCAAGAATCCACTGGCCTACATC
AGCAAGATCCGCTCCATAGCTGAGAAGTGTGGAATCGCAAAGATCCTGCC
GCCGGCAACCTGGTCGCCGCCGTTTGCAGTGGACGTGGACAAGCTACGCT
TTGTGCCACGTGTCCAGCGGCTGAATGAGCTCGAGGCAAAGACGCGCGTC
AAACTCAACTTCCTTGATCAGATCGCAAAGTTCTGGGAGCTGCAAGGCTC
TTCACTAAAGATCCCAATGGTGGAGCGAAAGGCTCTCGACTTGTACACAC
TGCACCGCATCGTTCAGGAGGA

BO11422.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG9088-PA 5517 lid-RA 1..806 17..822 4030 100 Plus
CG9088-PB 5517 lid-RB 1..806 17..822 4030 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
lid-RF 7004 CG9088-RF 246..1051 17..822 4030 100 Plus
lid-RE 6941 CG9088-RE 246..1051 17..822 4030 100 Plus
lid-RD 5841 CG9088-RD 124..929 17..822 4030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5995685..5996490 822..17 4030 100 Minus
Blast to na_te.dros performed on 2015-02-12 13:15:47 has no hits.

BO11422.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:06:13 Download gff for BO11422.5prime
Subject Subject Range Query Range Percent Splice Strand
lid-PB 1..805 17..821 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:29:52 Download gff for BO11422.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9088-PB 1..805 17..821 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:25:32 Download gff for BO11422.5prime
Subject Subject Range Query Range Percent Splice Strand
lid-RC 130..938 10..821 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:58:46 Download gff for BO11422.5prime
Subject Subject Range Query Range Percent Splice Strand
lid-RD 120..928 10..821 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:58:46 Download gff for BO11422.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5995686..5996494 10..821 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:25:32 Download gff for BO11422.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5995686..5996494 10..821 99   Minus

BO11422.complete Sequence

5548 bp assembled on 2010-01-06

GenBank Submission: KX799863

> BO11422.complete
GAAGTTATCAGTCGACATGTCCGCCAAAACTGAGGCGGACAACACGACGG
CCGCCAACTCCGGCGGCGGAGGAGTCGGGAGCGGCACCTCATCCGGCGGG
GGCGCATCCGCGAATGGAACAGCAACTCCGGCACGTCGTCTGCGTACCCG
AAACTCAACGGGCAACGGGACTAATAGTGGAAGTGAGTCCGTAAAGAAAT
CCAATGCTAACGACGAGCCCTCGACCCCAGTCACCCCGGCAGGAGCAACA
GGATCTCACACCCATGCTCCGCCAGGCATTTCTCCGGCGGTAATGGAACG
GCCTATGCCCAGTGTTCCCATGAATCACGCCAGCAGCAGTGTGTCAGCCA
GCAAAAAGTACCATAATAGTTGTCCTCATCCCACGCCCACGCCTGCGCCC
ACTGGGCACAAGAAGTCGGTCCACACGCAGCCGCACAGCAGCAACAAGTT
TGACCAGGGAAAGAACGAGGAGTTCCACTTTGACACGCCGCCAGAGTGCC
CTGTGTTCCGGCCCACAACTGAGGAGTTCAAGAATCCACTGGCCTACATC
AGCAAGATCCGCTCCATAGCTGAGAAGTGTGGAATCGCAAAGATCCTGCC
GCCGGCAACCTGGTCGCCGCCGTTTGCAGTGGACGTGGACAAGCTACGCT
TTGTGCCACGTGTCCAGCGGCTGAATGAGCTCGAGGCAAAGACGCGCGTC
AAACTCAACTTCCTTGATCAGATCGCAAAGTTCTGGGAGCTGCAAGGCTC
TTCACTAAAGATCCCAATGGTGGAGCGAAAGGCTCTCGACTTGTACACAC
TGCACCGCATCGTTCAGGAGGAGGGGGGCATGGAGCAAACCACAAAGGAT
CGCAAGTGGGCCAAGGTGGCCAACCGGATGCAGTACCCCTCAAGCAAAAG
TGTTGGCGCAACCCTGAAGGCACACTACGAACGCATCTTGCACCCCTTTG
AGGTATACACTTCGGGAAAGGTTCTAGGACCCACACCAACGTCGTCTGGA
TCTGGTAGCACACCCGTCAAATTGGAGGACGGAGGTGGAACCGATTACAA
AGCCCATGAAATTCCCACACGGCAGCAGATTGCGCCGCCCAACGAGACAA
ACACACGTCGCTCCAAGCGTTTCGGAAATTCCAATGCCAGCTGCGGCCTG
AGTGGTGTTACACCCACAACAAAGCCATCAGCGGGCGTATTTGTCAAGAC
GGAGACCAAGGAAGAATTTAAGAGGGATCTTCTCAGCAGTTTCAATGCTG
TCAACAGCGGCGGATCGCCATTAGCCACAGGTACTACGGCAAACACTCGC
GGAGCCAGCCAGAAGAAGGGAGGAGAGCCTCCAGCACTTATCGTAGACCC
ACTGATGAAGTACATTTGCCACATCTGCAATCGCGGCGACGTCGAGGAGT
CAATGCTGCTTTGCGATGGCTGCGACGACAGCTACCACACCTTTTGCCTG
TTGCCGCCTCTGACCAGCATACCCAAAGGCGAATGGCTTTGCCCGCGCTG
CGTCGTCGAGGAAGTAAGCAAACCGCAGGAGGCGTTTGGTTTTGAACAGG
CAGAGAGGGAATACACTCTGCAACAATTTGGACAAATGGCTGACCAGTTC
AAGCAAGAATACTTCCGCAAGCCGGTGCACTTGGTGCCCACTGAGATGGT
GGAGCGCGAGTTTTGGCGCATCGTGTCATCTATCGATGAAGACGTTACCG
TTGAGTATGGGGCGGACTTGCACACAATGGATCACGGCTCTGGTTTTCCC
ACTAAGAGCTCGTTATATTTGTTGCCGGGCGACCAAGAGTATGCAGAGTC
AAGCTGGAACCTTAACAACTTGCCGTTGCTGGAGGATTCCATTCTTGGTC
ACATCAATGCCGACATTAGCGGCATGAACGCTCCGTGGATGTATGTGGGC
ATGTGCTTCGCAGCCTTCTGCTGGCACAACGAGGACCACTGGAGCTACTC
CATCAACTATCTTCACTGGGGAGAACCTAAAACCTGGTACGGTGTTCCGG
GGTCCTGTGCTGAGCAGTTTGAAGAGACCATGAAGCAGGCAGCTCCAGAA
CTTTTTTCATCACAGCCCGATCTGCTTCACCAGCTGGTGACCATTATGAA
CCCGAACATTTTGATGAACAATCGTGTACCGGTATTCCGAACCGATCAGC
ATGCAGGCGAGTTTGTGATCACCTTTCCCAGGGCCTATCACGCAGGCTTT
AACCAAGGCTATAACTTCGCGGAGGCCGTCAATTTTGCACCTGCCGATTG
GCTGAAGATGGGGCGCGAGTGTGTTAACCACTATTCCATGCTGCGACGTT
TCTGTGTCTTTTCGCACGACGAGCTCGTTTGCAAGATGGCCCTGGAGCCA
GCGAAACTCACATTTGGCATCGCTACTGCCTGCTACATCGACATGGCCGA
AATGGTCGACACGGAGAAGAAACTGCGCAAATCGCTTTTGGAGTGGGGCG
TTACCCGCGCAGAGCGTCGCGCCTTCGAGCTAGTAAACGACGATGAGCGC
CATTGCCAAGAGTGCAACACCACGTGCTTCCTGTCGGCGGTGGCCTGCGA
GTGCAACGACAAGTTGATTGTCTGTTTGCGCCACTATACGGTACTCTGCG
GCTGTGCTCCTGAGAAGCACACTCTGATATATCGTTATACACTGGACGAG
ATGCCGCTGATGCTGCAGAAACTTAAGGTGAAGGCGCACAGCTTCGAGCG
ATGGCTTTCACGTTGCCGTGACATAGTCGATGCACATACACCCACCTCGG
TGACCCTGCAGGAGCTGCAGGAATTGTGCAAGGAGGCCGAGACGAAAAAG
TTTCCCTCCTCGCTGCTCATCGATCGCCTTAATGCTGCGGCCGTTGAGGC
AGAGAAATGTGTCACAGTCATACAGCAACTGGGTATCAATAAGGTGCGAA
CTCGCTCGGACCACAACCAGGAGGCTGCTCAGTACAAGCTAACCATGGAG
GAGCTAGAGTTGTTCGTTCAAGAAATCGATAATCTCTGCTGCATCATTGA
CGAGGGCGCTTCGGTGCGAGAGCTGCTTGTTTTGGGAAAACAGTTTGTGG
AGCGGTCCGAGAGCCAGCTGCAATTATCGCTGGAGTCTCTGGAGGAGAGT
GAGCTGGAAACGTTAATAAACGAAGGCAGCTCCTTACGCATCGAACTGCA
ACAGCTCGACCTACTGCAAAAGCGACTGAAGCAGTGCAAGTGGTACAAGC
GCTCGCAGGGATTGAGGGAGACCAGCTCGAAGCTGACCTACCAAGACGTG
AAGAACCTGTTACACATTGCGGCTGCTGACCTTGATCCCACGGATCCGTA
TGTCGACAAGGAGATGCGAAAATTGCAACAGATCGGTGCAGATATCGAAG
CCTGGGAGTCGCAGGCGGCCAAGTATTTCCGGCGACTGACCCAACAGCAC
GAACTGGGCGAAATTGAGCAGTTCTTGAAATCGGCCTCCGACATCAACGG
TCAAGTGCCTTCGCATGGACTGCTGAAGGATGCACTACGAAAGGCGCGTG
AGTGGCTACGGGCCGTTGAGCAGCTACAGCAAAACAACCACGTCACATAT
TGCCACACACTGGAGGCAATGATCGAGCGCGGCTTGAACATACCCATCCA
GCTGGAGGAGCTGAGCCGAATGCAGGGACACCTAAATAGTGCACATCAAT
GGAAGGACAATACAGCGTGCGCCTTCCTCAAGAAGGGCACCTTCTATACG
CTCTTGGAGGTTCTCATGCCCCGGTCGGACGCCATCAACATAGACTCGGA
TCTCAAGCCGCGCTTCCAGGATGATTTTCTGAAAGAGAAAAATCCGGCGG
AGATTGTGGCCAGCTTCAAGCACGCTGAGGAGCAGGAGCTGCTCGATATG
CGCGAACTTCGGCGGCAAAATATGAACAAGAATCCCATGCGCGATATGTT
CTGCTTGTGCAAGTCCGAGTTCCGAAACTTAATGTTCAATTGTCAGTTGT
GCCGCGATTGGTTTCACGAGGATTGCGTCCCACCGCCATCAGCCACAAAT
CAAAATGGAATTGTTAACGGCGGATCAGGACCAGGTACCAATCGACCCAA
GTGGCTATGTCCGAGCTGTGTGCGCTCGAAGAGACCGCGCCTAGAAACCA
TCCTTCCGCTACTTGTCCAGCTGCAGCAACTGCCCATCCGTCTGCCCGAG
GACGAAGCGTTGCGTTGCCTGGCGGAGCGTGCGATGAACTGGCAGGATCG
GGCCAGGAAAGCTCTTAGCAGTCCTGACGTCAGTGCGGCTCAAGAAGCGA
TTATGGCGCAGCAGCAGCAGAAGCGGCGCTCCGAGGGTGGAGCAGGGGTG
GGAAATATCAGCAGTCCACGGAAGCCACGTCGACGGGGGAGCCTGACGAA
AGAGGCAAGTGGTTCAACAGAGTCCGATGCCGACGACGATGACGACGAGG
ACGAATGTCGTCTTCGAATCGTCGAAGACAACTTTAGTAACGATGAAGAT
GAGCCTCGTACCGCCCCCGCGACCTCCACCGTCAACTCCGATCTCCTCAA
GCTGCTGTCCGACAGTGAAATTGAAAATTTGCTTGACCTGATGATGGAGG
GCGACCTGCTAGAGGTATCCTTAGATGAAACGCAGGAGCTGTGGCGCATT
CTAGAAACGATGCCGCCCACGTTGCTGCAGGCGGAGGCCATGGAGCGTGT
TGTCCAGTACATGCAGCGTCAGCGGCAACAGCATACAAATCCGCTGCCAA
CATCCGGCGCCGAAGACTCTAACGATAGTCTGATGGTACAAAATAGTCCC
AATAGCAACAGCAATAGTGGCGGGGCAACGGGTTCTGCGAGCAACAGCGG
ACGCAACAAGAAGAGGCGCTCCAACGACACCGGCGGCAACTCGGCAGTGC
CGCGCAAGAAGCAGAGCACACCGAAGCAGACACCGGGCAAGAAGGGATCA
GCGGCAGCGGCACGCAAGAGCGATGCCAAGGCATCGCCAGCAGCATCCAC
CACTCCGGGTGCGGATGCCGATGCCGAGAATAAGCAGGCCAACGGCGGTA
ATACGAACTCCAGTACAGGATCAGGTGGTGGCAATTCTGCGACGACGACG
CCCACACCCGGCTCGACGCACAAAAAGCGAAAGCGCACCTCAACCACAGC
CACCAATAATAACAACAACAATAATAATAACAGCACGAACAATAGCAACA
GCAGTACCAATTTGAACAGCAACACCACCAGCGGCCAGGGAGCAGCTACT
GGAGGCAATAATGCGACTGGCGGTCAGAAGAAGCACGCGCAACGGTCTCA
ACAGGCGGCGCAGGAGGACGACGAGGAGGAGTGCCGGGCGGAGAACTGCC
ACAAGCCAACCGGGCGAGAGGTGGACTGGGTGCAGTGCGACGGCGGCTGC
AACGAATGGTTCCACATGTACTGTGTGGGCCTCAATCGCAGCCAGATAAA
GCCCGACGACGACTATATCTGCATTCGATGCACAAAGACAGTTGCCATCG
GAACACAGGGCTCCGGTCACAGTATGAGCGTGGCGTCCACGACGACGCCG
GGCAAGCAGCGGGCGGTGCAATCGGCGCGGGCAAGCTTTCTAGACCAT

BO11422.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
lid-RF 5517 CG9088-PF 1..5514 17..5530 27570 100 Plus
lid-RE 5517 CG9088-PE 1..5514 17..5530 27570 100 Plus
lid-RD 5517 CG9088-PD 1..5514 17..5530 27570 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
lid-RF 7004 CG9088-RF 246..5759 17..5530 27570 100 Plus
lid-RE 6941 CG9088-RE 246..5759 17..5530 27570 100 Plus
lid-RD 5841 CG9088-RD 124..5637 17..5530 27570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5990645..5992408 5530..3767 8820 100 Minus
2L 23513712 2L 5995028..5996490 1479..17 7315 100 Minus
2L 23513712 2L 5993470..5994888 2895..1477 7095 100 Minus
2L 23513712 2L 5992469..5993347 3770..2892 4395 100 Minus
Blast to na_te.dros performed 2014-11-28 02:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6688..6864 5012..5177 166 59.6 Plus

BO11422.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-06 09:25:56 Download gff for BO11422.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RB 114..5627 17..5532 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:15:57 Download gff for BO11422.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RC 134..5647 17..5532 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:08 Download gff for BO11422.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RD 124..5637 17..5532 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:08 Download gff for BO11422.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5990643..5992405 3770..5532 99 <- Minus
2L 5992470..5993345 2894..3769 100 <- Minus
2L 5993472..5994886 1479..2893 100 <- Minus
2L 5995029..5996490 17..1478 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:15:57 Download gff for BO11422.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5990643..5992405 3770..5532 99 <- Minus
arm_2L 5992470..5993345 2894..3769 100 <- Minus
arm_2L 5993472..5994886 1479..2893 100 <- Minus
arm_2L 5995029..5996490 17..1478 100   Minus

BO11422.pep Sequence

Translation from 16 to 5548

> BO11422.pep
MSAKTEADNTTAANSGGGGVGSGTSSGGGASANGTATPARRLRTRNSTGN
GTNSGSESVKKSNANDEPSTPVTPAGATGSHTHAPPGISPAVMERPMPSV
PMNHASSSVSASKKYHNSCPHPTPTPAPTGHKKSVHTQPHSSNKFDQGKN
EEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWS
PPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIP
MVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATL
KAHYERILHPFEVYTSGKVLGPTPTSSGSGSTPVKLEDGGGTDYKAHEIP
TRQQIAPPNETNTRRSKRFGNSNASCGLSGVTPTTKPSAGVFVKTETKEE
FKRDLLSSFNAVNSGGSPLATGTTANTRGASQKKGGEPPALIVDPLMKYI
CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEV
SKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFW
RIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLN
NLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLH
WGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILM
NNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGR
ECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTE
KKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKL
IVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRC
RDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVT
VIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV
RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLL
QKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHIAAADLDPTDPYVDKEM
RKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH
GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELS
RMQGHLNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRF
QDDFLKEKNPAEIVASFKHAEEQELLDMRELRRQNMNKNPMRDMFCLCKS
EFRNLMFNCQLCRDWFHEDCVPPPSATNQNGIVNGGSGPGTNRPKWLCPS
CVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL
SSPDVSAAQEAIMAQQQQKRRSEGGAGVGNISSPRKPRRRGSLTKEASGS
TESDADDDDDEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDS
EIENLLDLMMEGDLLEVSLDETQELWRILETMPPTLLQAEAMERVVQYMQ
RQRQQHTNPLPTSGAEDSNDSLMVQNSPNSNSNSGGATGSASNSGRNKKR
RSNDTGGNSAVPRKKQSTPKQTPGKKGSAAAARKSDAKASPAASTTPGAD
ADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRKRTSTTATNNNN
NNNNNSTNNSNSSTNLNSNTTSGQGAATGGNNATGGQKKHAQRSQQAAQE
DDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDY
ICIRCTKTVAIGTQGSGHSMSVASTTTPGKQRAVQSARASFLDH

BO11422.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:02:50
Subject Length Description Subject Range Query Range Score Percent Strand
lid-PF 1838 CG9088-PF 1..1838 1..1838 9728 100 Plus
lid-PE 1838 CG9088-PE 1..1838 1..1838 9728 100 Plus
lid-PD 1838 CG9088-PD 1..1838 1..1838 9728 100 Plus
lid-PC 1838 CG9088-PC 1..1838 1..1838 9728 100 Plus
lid-PB 1838 CG9088-PB 1..1838 1..1838 9728 100 Plus