Clone Sequence Records
BO11463.3prime Sequence
245 bp (244 high quality bases) assembled on 2006-04-19
> BO11463.3prime
ATGGTCTAGAAAGCTTGCTCCCTAAATGGGATAGATGGTCGACGTTTCTG
GCGTGGCATTTGTGGTCTCAGCCTGCGGCGGACCAGAGAATCCCGTGCTA
GTCGTACCATCGACGGGAGCACCAGTTGGCGGAGTTGGCTCCGGGGTGGC
AAGACTGGAGAAAGCCGACACCCACGAGGTGCACAGCATGAAGGCCAGAC
AGAGGCTAAACAGCAGGTTGAAGAATTTCATGTCGACTGATAACT
BO11463.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:23:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-PA | 216 | CG14302-RA | 1..209 | 231..23 | 1045 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:19:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-RA | 281 | CG14302-RA | 20..238 | 237..19 | 1065 | 99.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:19:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18732786..18732991 | 224..19 | 1015 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:19:22 has no hits.
BO11463.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:07:18 Download gff for
BO11463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-PA | 1..216 | 18..231 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:31:21 Download gff for
BO11463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-PA | 1..216 | 18..231 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 20:36:56 Download gff for
BO11463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 1..218 | 19..236 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:09:11 Download gff for
BO11463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 20..238 | 19..237 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:09:11 Download gff for
BO11463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18732781..18732991 | 19..230 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 20:36:56 Download gff for
BO11463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14558503..14558713 | 19..230 | 98 | | Minus |
BO11463.5prime Sequence
245 bp (244 high quality bases) assembled on 2006-04-19
> BO11463.5prime
GAAGTTATCAGTCGACATGAAATTCTTCAACCTGCTGTTTAGCCTCTGTC
TGGCCTTCATGCTGTGCACCTCGTGGGTGTCGGCTTTCTCCAGTCTTGCC
ACCCCGGAGCCAACTCCGCCAACTGGTGCTCCCGTCGATGGTACGACTAG
CACGGGATTCTCTGGTCCGCCGCAGGCTGAGACCACAAATGCCACGCCAG
AAACGTCGACCATCTATCCCATTTACGGAGCAAGCTTTCTAGACC
BO11463.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:23:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-PA | 216 | CG14302-RA | 1..213 | 17..229 | 1065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-RA | 281 | CG14302-RA | 20..238 | 11..229 | 1080 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:48:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18732786..18732991 | 24..229 | 1030 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:48:53 has no hits.
BO11463.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:07:19 Download gff for
BO11463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-PA | 1..216 | 17..230 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:31:22 Download gff for
BO11463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-PA | 1..216 | 17..230 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 04:01:15 Download gff for
BO11463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 1..218 | 12..229 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:24:27 Download gff for
BO11463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 20..238 | 11..229 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:24:27 Download gff for
BO11463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18732781..18732991 | 18..229 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 04:01:15 Download gff for
BO11463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14558503..14558713 | 18..229 | 98 | | Plus |
BO11463.complete Sequence
247 bp assembled on 2006-10-10
GenBank Submission: FJ632090
> BO11463.complete
GAAGTTATCAGTCGACATGAAATTCTTCAACCTGCTGTTTAGCCTCTGTC
TGGCCTTCATGCTGTGCACCTCGTGGGTGTCGGCTTTCTCCAGTCTTGCC
ACCCCGGAGCCAACTCCGCCAACTGGTGCTCCCGTCGATGGTACGACTAG
CACGGGATTCTCTGGTCCGCCGCAGGCTGAGACCACAAATGCCACGCCAG
AAACGTCGACCATCTATCCCATTTACGGAGCAAGCTTTCTAGACCAT
BO11463.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:37:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-RA | 216 | CG14302-PA | 1..213 | 17..229 | 1065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:37:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-RA | 281 | CG14302-RA | 20..238 | 11..229 | 1080 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:37:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18732786..18732991 | 24..229 | 1030 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:37:30 has no hits.
BO11463.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:19:16 Download gff for
BO11463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 1..218 | 12..229 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:50 Download gff for
BO11463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 6..218 | 17..231 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:04:44 Download gff for
BO11463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 1..218 | 12..229 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:27 Download gff for
BO11463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14302-RA | 26..238 | 17..231 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:27 Download gff for
BO11463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18732780..18732991 | 17..231 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:50 Download gff for
BO11463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14558502..14558713 | 17..231 | 97 | | Plus |
BO11463.pep Sequence
Translation from 16 to 247
> BO11463.pep
MKFFNLLFSLCLAFMLCTSWVSAFSSLATPEPTPPTGAPVDGTTSTGFSG
PPQAETTNATPETSTIYPIYGASFLDH
BO11463.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:22:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14302-PA | 71 | CG14302-PA | 1..71 | 1..71 | 381 | 100 | Plus |