Clone Sequence Records
BO11465.3prime Sequence
311 bp (310 high quality bases) assembled on 2006-04-19
> BO11465.3prime
ATGGTCTAGAAAGCTTGCAGTGGATGCTTCGGAACATGGAGGATACCACT
GCCAAACGCTCCAATCGACGCAGCTTCCAGTTTTCGGATCGAATCCAGTG
TTCTGCTCGCAGGCAACTAGCTCGGCCTGTCCGGTGCTAGAGCACTGCCA
GTAGTGGGTTGGATCCCAGAAGTCACGGGAAATCTCTCCGGAGCGTCCCA
CGCAATCGGGCTCACCATTGCCATCGGGATTGCAGTCAAGGTCGGCGTAG
ATGGCAACGCAGAGGGTCAGGAAGAGAAGGACTAAAGCTGCTTTCATGTC
GACTGATAACT
BO11465.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31893-PA | 282 | Peritrophin-15b-RA | 1..279 | 297..19 | 1395 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:52:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..338 | 297..19 | 1395 | 100 | Minus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..311 | 297..19 | 1395 | 100 | Minus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..305 | 283..19 | 1325 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:52:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394536..8394807 | 19..290 | 1360 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:52:39 has no hits.
BO11465.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:07:22 Download gff for
BO11465.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 15..297 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:31:26 Download gff for
BO11465.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 15..297 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 12:53:35 Download gff for
BO11465.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 19..311 | 13..305 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:10:39 Download gff for
BO11465.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 24..316 | 13..305 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:10:39 Download gff for
BO11465.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394531..8394812 | 13..296 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 12:53:35 Download gff for
BO11465.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394531..8394812 | 13..296 | 97 | | Plus |
BO11465.5prime Sequence
311 bp (310 high quality bases) assembled on 2006-04-19
> BO11465.5prime
GAAGTTATCAGTCGACATGAAAGCAGCTTTAGTCCTTCTCTTCCTGACCC
TCTGCGTTGCCATCTACGCCGACCTTGACTGCAATCCCGATGGCAATGGT
GAGCCCGATTGCGTGGGACGCTCCGGAGAGATTTCCCGTGACTTCTGGGA
TCCAACCCACTACTGGCAGTGCTCTAGCACCGGACAGGCCGAGCTAGTTG
CCTGCGAGCAGAACACTGGATTCGATCCGAAAACTGGAAGCTGCGTCGAT
TGGAGCGTTTGGCAGTGGTATCCTCCATGTTCCGAAGCATCCACTGCAAG
CTTTCTAGACC
BO11465.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31893-PA | 282 | Peritrophin-15b-RA | 1..279 | 17..295 | 1395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..338 | 17..295 | 1395 | 100 | Plus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..311 | 17..295 | 1395 | 100 | Plus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..305 | 31..295 | 1325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394536..8394807 | 295..24 | 1360 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:00:03 has no hits.
BO11465.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:07:23 Download gff for
BO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:31:27 Download gff for
BO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 11:52:16 Download gff for
BO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 19..311 | 9..301 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:27:20 Download gff for
BO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 24..316 | 9..301 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:27:20 Download gff for
BO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394531..8394812 | 18..301 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 11:52:16 Download gff for
BO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394531..8394812 | 18..301 | 97 | | Minus |
BO11465.complete Sequence
313 bp assembled on 2006-10-10
GenBank Submission: FJ632091
> BO11465.complete
GAAGTTATCAGTCGACATGAAAGCAGCTTTAGTCCTTCTCTTCCTGACCC
TCTGCGTTGCCATCTACGCCGACCTTGACTGCAATCCCGATGGCAATGGT
GAGCCCGATTGCGTGGGACGCTCCGGAGAGATTTCCCGTGACTTCTGGGA
TCCAACCCACTACTGGCAGTGCTCTAGCACCGGACAGGCCGAGCTAGTTG
CCTGCGAGCAGAACACTGGATTCGATCCGAAAACTGGAAGCTGCGTCGAT
TGGAGCGTTTGGCAGTGGTATCCTCCATGTTCCGAAGCATCCACTGCAAG
CTTTCTAGACCAT
BO11465.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 282 | CG31893-PC | 1..279 | 17..295 | 1395 | 100 | Plus |
| Peritrophin-15b-RA | 282 | CG31893-PA | 1..279 | 17..295 | 1395 | 100 | Plus |
| Peritrophin-15b-RB | 276 | CG31893-PB | 9..273 | 31..295 | 1325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:11:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..338 | 17..295 | 1395 | 100 | Plus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..311 | 17..295 | 1395 | 100 | Plus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..305 | 31..295 | 1325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394536..8394807 | 295..24 | 1360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:11:15 has no hits.
BO11465.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:25:23 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:45:43 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:29 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 28..306 | 17..297 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:25:23 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:45 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 33..311 | 17..297 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:45 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394534..8394812 | 18..297 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:29 Download gff for
BO11465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394534..8394812 | 18..297 | 97 | | Minus |
BO11465.pep Sequence
Translation from 16 to 313
> BO11465.pep
MKAALVLLFLTLCVAIYADLDCNPDGNGEPDCVGRSGEISRDFWDPTHYW
QCSSTGQAELVACEQNTGFDPKTGSCVDWSVWQWYPPCSEASTASFLDH
BO11465.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:01:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-PC | 93 | CG31893-PC | 1..93 | 1..93 | 535 | 100 | Plus |
| Peritrophin-15b-PA | 93 | CG31893-PA | 1..93 | 1..93 | 535 | 100 | Plus |
| Peritrophin-15b-PB | 91 | CG31893-PB | 1..91 | 1..93 | 514 | 97.8 | Plus |
| Peritrophin-15a-PA | 92 | CG17814-PA | 1..92 | 1..88 | 201 | 44.6 | Plus |
| CG14645-PA | 97 | CG14645-PA | 3..95 | 6..94 | 137 | 31.2 | Plus |
