Clone Sequence Records
BO11480.3prime Sequence
280 bp (279 high quality bases) assembled on 2006-04-19
> BO11480.3prime
ATGGTCTAGAAAGTTGCGACGTTCAGCAAGAGTGCGAAAGTTGGCTGTTT
ATTTGGTGTAGGGCTCGACCCACTTCCACTCCTCCCAGACGACGCAGTTC
TGCTGCTGCTCCATGAAGGCGTAGTTGTCCGGGCACTGGATGTAGTCAGC
CTTCTCCTGACCCTCGGGGCACACCCAGTAGTGGGTGGGGTCCGAGATGT
CGCGGAACTTGCGAGCGTGATCCTCGACAATGGCGCAATTGGGCTCGGCA
TAGATGTCTTGGCCATGTCGACTGATAACT
BO11480.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7710-PA | 252 | CG7710-RA | 1..249 | 266..18 | 1245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:19:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34282-RB | 675 | CG34282-RB | 82..330 | 266..18 | 1245 | 100 | Minus |
| CG34282-RA | 462 | CG34282-RA | 82..330 | 266..18 | 1245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:19:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18695402..18695650 | 266..18 | 1245 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:19:14 has no hits.
BO11480.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:07:49 Download gff for
BO11480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7710-PA | 1..252 | 14..266 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:32:02 Download gff for
BO11480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7710-PA | 1..252 | 14..266 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 20:36:53 Download gff for
BO11480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 72..333 | 14..275 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:08:52 Download gff for
BO11480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 72..333 | 14..275 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:08:52 Download gff for
BO11480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18695392..18695653 | 14..275 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 20:36:53 Download gff for
BO11480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14521114..14521375 | 14..275 | 97 | | Minus |
BO11480.5prime Sequence
280 bp (279 high quality bases) assembled on 2006-04-19
> BO11480.5prime
GAAGTTATCAGTCGACATGGCCAAGACATCTATGCCGAGCCCAATTGCGC
CATTGTCGAGGATCACGCTCGCAAGTTCCGCGACATCTCGGACCCCACCC
ACTACTGGGTGTGCCCCGAGGGTCAGGAGAAGGCTGACTACATCCAGTGC
CCGGACAACTACGCCTTCATGGAGCAGCAGCAGAACTGCGTCGTCTGGGA
GGAGTGGAAGTGGGTCGAGCCCTACACCAAATAAACAGCCAACTTTCGCA
CTCTTGCTGAACGTCGCAACTTTCTAGACC
BO11480.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7710-PA | 252 | CG7710-RA | 1..249 | 17..265 | 1245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 06:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34282-RB | 675 | CG34282-RB | 82..330 | 17..265 | 1245 | 100 | Plus |
| CG34282-RA | 462 | CG34282-RA | 82..330 | 17..265 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 06:58:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18695402..18695650 | 17..265 | 1245 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 06:58:24 has no hits.
BO11480.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:07:50 Download gff for
BO11480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7710-PA | 1..252 | 17..269 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:32:03 Download gff for
BO11480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7710-PA | 1..252 | 17..269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 09:06:19 Download gff for
BO11480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 72..333 | 8..269 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 07:42:38 Download gff for
BO11480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 72..333 | 8..269 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 07:42:38 Download gff for
BO11480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18695392..18695653 | 8..269 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 09:06:19 Download gff for
BO11480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14521114..14521375 | 8..269 | 97 | | Plus |
