Clone Sequence Records
BO11495.3prime Sequence
362 bp (361 high quality bases) assembled on 2006-04-19
> BO11495.3prime
ATGGTCTAGAAAGCTTGCTTTGGTCACGCGATTCCAGGCGCTGGAGTAGC
GCTCCGCCTCGAAGAAATTGCTCAACGTTTGGGGCAGATTCTTGCGCTTC
GCCTCCGTGCCCAGGATTCGTGGGGGCGTGTAGATATTGCTCTTGGGCGT
GGCAGCTTCCGTGCTCTGGTGCCCACTAATGCACTTCTCCTCGTGGGCGG
GATCAGCGGCAGACGTGGGCGTGGCCACCTGTGTGCGCCACTCGAAGATG
GGCGAACTGGCTCCGCCCTGGGGCAACTGCAACTGAATTGTGGCCCGGCT
GACGAAGAGCTCCTCCTGGCCGAAACTTTGGACTACTGCGGCTGCCATGT
CGACTGATAACT
BO11495.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-PA | 333 | CG13117-RA | 1..330 | 348..19 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 17:29:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-RB | 1305 | CG13117-RB | 66..395 | 348..19 | 1650 | 100 | Minus |
| CG13117-RA | 685 | CG13117-RA | 66..395 | 348..19 | 1650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 17:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9736710..9737039 | 348..19 | 1650 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 17:29:27 has no hits.
BO11495.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:08:17 Download gff for
BO11495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-PA | 1..333 | 18..348 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:32:41 Download gff for
BO11495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-PA | 1..333 | 18..348 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:35:26 Download gff for
BO11495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 58..404 | 8..357 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 19:02:13 Download gff for
BO11495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 58..404 | 8..357 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 19:02:13 Download gff for
BO11495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9736710..9737048 | 8..348 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:35:26 Download gff for
BO11495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9736710..9737048 | 8..348 | 98 | | Minus |
BO11495.5prime Sequence
362 bp (361 high quality bases) assembled on 2006-04-19
> BO11495.5prime
GAAGTTATCAGTCGACATGGCAGCCGCAGTAGTCCAAAGTTTCGGCCAGG
AGGAGCTCTTCGTCAGCCGGGCCACAATTCAGTTGCAGTTGCCCCAGGGC
GGAGCCAGTTCGCCCATCTTCGAGTGGCGCACACAGGTGGCCACGCCCAC
GTCTGCCGCTGATCCCGCCCACGAGGAGAAGTGCATTAGTGGGCACCAGA
GCACGGAAGCTGCCACGCCCAAGAGCAATATCTACACGCCCCCACGAATC
CTGGGCACGGAGGCGAAGCGCAAGAATCTGCCCCAAACGTTGAGCAATTT
CTTCGAGGCGGAGCGCTACTCCAGCGCCTGGAATCGCGTGACCAAAGCAA
GCTTTCTAGACC
BO11495.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:24:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-PA | 333 | CG13117-RA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:06:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-RB | 1305 | CG13117-RB | 66..395 | 17..346 | 1650 | 100 | Plus |
| CG13117-RA | 685 | CG13117-RA | 66..395 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:06:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9736710..9737039 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:06:32 has no hits.
BO11495.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:08:18 Download gff for
BO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-PA | 1..333 | 17..347 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:32:43 Download gff for
BO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-PA | 1..333 | 17..347 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:55:27 Download gff for
BO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 58..404 | 8..357 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:30:45 Download gff for
BO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 58..404 | 8..357 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:30:45 Download gff for
BO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9736710..9737048 | 17..357 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:55:27 Download gff for
BO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9736710..9737048 | 17..357 | 98 | | Plus |
BO11495.complete Sequence
364 bp assembled on 2006-10-10
GenBank Submission: FJ632102
> BO11495.complete
GAAGTTATCAGTCGACATGGCAGCCGCAGTAGTCCAAAGTTTCGGCCAGG
AGGAGCTCTTCGTCAGCCGGGCCACAATTCAGTTGCAGTTGCCCCAGGGC
GGAGCCAGTTCGCCCATCTTCGAGTGGCGCACACAGGTGGCCACGCCCAC
GTCTGCCGCTGATCCCGCCCACGAGGAGAAGTGCATTAGTGGGCACCAGA
GCACGGAAGCTGCCACGCCCAAGAGCAATATCTACACGCCCCCACGAATC
CTGGGCACGGAGGCGAAGCGCAAGAATCTGCCCCAAACGTTGAGCAATTT
CTTCGAGGCGGAGCGCTACTCCAGCGCCTGGAATCGCGTGACCAAAGCAA
GCTTTCTAGACCAT
BO11495.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-RB | 333 | CG13117-PB | 1..330 | 17..346 | 1650 | 100 | Plus |
| CG13117-RA | 333 | CG13117-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-RB | 1305 | CG13117-RB | 66..395 | 17..346 | 1650 | 100 | Plus |
| CG13117-RA | 685 | CG13117-RA | 66..395 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9736710..9737039 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:40:57 has no hits.
BO11495.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:30:48 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 1..333 | 17..347 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:02:42 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 58..404 | 8..357 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:38 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 66..395 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:30:48 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 58..404 | 8..357 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:45 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13117-RA | 66..395 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:45 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9736710..9737039 | 17..348 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:38 Download gff for
BO11495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9736710..9737039 | 17..348 | 99 | | Plus |
BO11495.pep Sequence
Translation from 16 to 364
> BO11495.pep
MAAAVVQSFGQEELFVSRATIQLQLPQGGASSPIFEWRTQVATPTSAADP
AHEEKCISGHQSTEAATPKSNIYTPPRILGTEAKRKNLPQTLSNFFEAER
YSSAWNRVTKASFLDH
BO11495.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13117-PB | 110 | CG13117-PB | 1..110 | 1..110 | 566 | 100 | Plus |
| CG13117-PA | 110 | CG13117-PA | 1..110 | 1..110 | 566 | 100 | Plus |
