Clone BO11532 Report

Search the DGRC for BO11532

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:115
Well:32
Vector:pDNR-Dual
Associated Gene/Transcriptfzy-RA
Protein status:BO11532.pep: validated full length
Sequenced Size:1612

Clone Sequence Records

BO11532.3prime Sequence

844 bp (821 high quality bases) assembled on 2006-04-19

> BO11532.3prime
ATGGTCTAGAAAGCTTGCACGGATGCTCTGTCGGAACACGCTCTGTTTGC
CCTTGCTGGTCGAAACTGCCTTCTTGGACGCCAACGGATCGGGAGCGAAG
CAGTTCCAAAGACGCAGGGTTTCATCAGCTCCGGCGCTGATCACTGTGCT
GCCGTCCGGAGACATGGCCATCTGGAGAACTCGTGACGTGTGTCCAGTCA
AATCGGCTTGCTTCACCATTGTTGGGTATTTCCAAATGGTCAGTTGGTTG
TTAGCAAAACCATGCGCAGAGATCAGCTCCTTGTAGTGGCGAGAAAAGAG
CAGAGAACAGACCTGCGACTTGGAGTCCACGGATTTCATTAAAGTGCCAT
TGTTCACATTCCAGAACTTGATGCAGCGATCGGCGGTGCCGCCTCCAGAG
GCTAGAGTACTTGGTTGCCAGGGACACCAGGCCAAGGCACGCACTGCAGC
TTGATGGTCGTTGAATTTGTGCAAGGGATCGGTGGCAGTTCCCACGCCAC
CGCTGGCCGCCGACCAAACATTCACCAGATTGTCGTTGCCTCCGCTAGCC
AAATACTTGAAATCCGTGGACCACTTTAGGCCGCAAACCTCCTGCGTGTG
TCCGGACAATGTGGAAAGCTTGTGCTCACGTGCACGCACATCGTGGTGGA
CAATGGTGCCATCCCGGCTGCCAGAGGAAACCAGGAATGAGTTCCAGGCC
AAGGATCCCACTCGGGCACTGTGTCCATCCATCACTCGCAGACGCTTCAC
TTTGGAGCAGTCCCACAGCTCCACGGCACCGGTGCTGTTGCCGATGGCAA
GTATCTGCCCCTCCTGGATCCACGATAGCGAGCCTGCGTAGTCG

BO11532.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG4274-PA 1581 fzy-RA 753..1578 844..19 4130 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
fzy-RA 1996 CG4274-RA 898..1723 844..19 4130 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 11:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16311999..16312824 844..19 4130 100 Minus
Blast to na_te.dros performed on 2015-02-01 11:24:41 has no hits.

BO11532.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:09:12 Download gff for BO11532.3prime
Subject Subject Range Query Range Percent Splice Strand
fzy-PA 753..1581 16..844 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:34:01 Download gff for BO11532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4274-PA 753..1581 16..844 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:37:26 Download gff for BO11532.3prime
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 898..1732 12..844 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:11:57 Download gff for BO11532.3prime
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 898..1732 12..844 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:11:57 Download gff for BO11532.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16311999..16312833 12..844 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:37:26 Download gff for BO11532.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16311999..16312833 12..844 99   Minus

BO11532.5prime Sequence

909 bp (834 high quality bases) assembled on 2006-04-19

> BO11532.5prime
GAAGTTATCAGTCGACATGTCGCAGTTCAATTTTGTGAGCGATTTGCAGA
ATGCTCTCATCATGGACGGCGAGACGCGCGGACCTGCGCCCAGGTGGAAG
AAGAAGCTGGAGGCGTCTCTAAATGGAAGTGTGAATACCACTCGGTCGGT
GCTATCCGTCTCGTACAACACCAGTTTCTCGGGTGTCCAGGCGCCCACGA
AAACTCCGGGCAAGAGCAGCGAGGGCAAGACCAAGAAGTCCAACACCACG
CCCTCTAAGACGCCAGGAGGCGGAGATCGCTTTATTCCGAATCGGGCGGC
TACCAACTTTGAGTTAGCACACTTTCTGGTGAACAAAGACTCCGGCGATA
AGTCCGATGAGGAGAACGACAAGGCCACCTCGAGCAACAGCAACGAGAGC
AATGTCCAGGCTTCGGCTCACAAGGGCGACCGGCAGAAACTCATCTCTGA
AGTGGCCCAGGTCGGTGACTCCAAGGGCGGGCGCATTTTGTGCTACCAAA
ACAAGGCTCCCGCTGCTCCAGAAACACACAACAATCCCCTGAAGGTCGTG
TACTCCATTAAGACACCCATATCCACAAAGAGTGGCTCACGCTATATACC
CACCACATCCGAGAGGATTCTGGATGCACCTGATTTTATTAACGATTACT
ATTTAAATCTTATGGATTGGAGTGCCGACAATATAGTGGCTGTGGCCTTG
GGCAGTTGCGTCTATTTGTGGAACGCACAGACCGGAAATATCGAGCAGCT
TACGGAGTTTGAGGAGGGCGACTACGCAGGCTCGCTATCGTGGATCCAGG
AGGGGCAGATACTTGCCATCGGCAACAGCACCGGTGCCGTGGAGCTGTGG
GACTGCTCCAAAGTGAAGCGTCTGCGAGTGATGGATGGGACCAGTGCCCG
AGTGGGATC

BO11532.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG4274-PA 1581 fzy-RA 1..872 17..888 4360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
fzy-RA 1996 CG4274-RA 146..1038 17..909 4420 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16311505..16311827 328..650 1615 100 Plus
2L 23513712 2L 16311101..16311414 17..330 1570 100 Plus
2L 23513712 2L 16311881..16312139 651..909 1250 98.8 Plus
Blast to na_te.dros performed on 2015-02-10 20:43:09 has no hits.

BO11532.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:09:13 Download gff for BO11532.5prime
Subject Subject Range Query Range Percent Splice Strand
fzy-PA 1..893 17..909 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:34:03 Download gff for BO11532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4274-PA 1..893 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:59:57 Download gff for BO11532.5prime
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 142..1038 9..909 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:12:52 Download gff for BO11532.5prime
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 142..1038 9..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:12:52 Download gff for BO11532.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16311097..16311412 9..328 98 -> Plus
2L 16311506..16311827 329..650 100 -> Plus
2L 16311881..16312139 651..909 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:59:57 Download gff for BO11532.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16311097..16311412 9..328 98 -> Plus
arm_2L 16311506..16311827 329..650 100 -> Plus
arm_2L 16311881..16312139 651..909 99   Plus

BO11532.complete Sequence

1612 bp assembled on 2006-10-10

GenBank Submission: FJ632105

> BO11532.complete
GAAGTTATCAGTCGACATGTCGCAGTTCAATTTTGTGAGCGATTTGCAGA
ATGCTCTCATCATGGACGGCGAGACGCGCGGACCTGCGCCCAGGTGGAAG
AAGAAGCTGGAGGCGTCTCTAAATGGAAGTGTGAATACCACTCGGTCGGT
GCTATCCGTCTCGTACAACACCAGTTTCTCGGGTGTCCAGGCGCCCACGA
AAACTCCGGGCAAGAGCAGCGAGGGCAAGACCAAGAAGTCCAACACCACG
CCCTCTAAGACGCCAGGAGGCGGAGATCGCTTTATTCCGAATCGGGCGGC
TACCAACTTTGAGTTAGCACACTTTCTGGTGAACAAAGACTCCGGCGATA
AGTCCGATGAGGAGAACGACAAGGCCACCTCGAGCAACAGCAACGAGAGC
AATGTCCAGGCTTCGGCTCACAAGGGCGACCGGCAGAAACTCATCTCTGA
AGTGGCCCAGGTCGGTGACTCCAAGGGCGGGCGCATTTTGTGCTACCAAA
ACAAGGCTCCCGCTGCTCCAGAAACACACAACAATCCCCTGAAGGTCGTG
TACTCCATTAAGACACCCATATCCACAAAGAGTGGCTCACGCTATATACC
CACCACATCCGAGAGGATTCTGGATGCACCTGATTTTATTAACGATTACT
ATTTAAATCTTATGGATTGGAGTGCCGACAATATAGTGGCTGTGGCCTTG
GGCAGTTGCGTCTATTTGTGGAACGCACAGACCGGAAATATCGAGCAGCT
TACGGAGTTTGAGGAGGGCGACTACGCAGGCTCGCTATCGTGGATCCAGG
AGGGGCAGATACTTGCCATCGGCAACAGCACCGGTGCCGTGGAGCTGTGG
GACTGCTCCAAAGTGAAGCGTCTGCGAGTGATGGATGGACACAGTGCCCG
AGTGGGATCCTTGGCCTGGAACTCATTCCTGGTTTCCTCTGGCAGCCGGG
ATGGCACCATTGTCCACCACGATGTGCGTGCACGTGAGCACAAGCTTTCC
ACATTGTCCGGACACACGCAGGAGGTTTGCGGCCTAAAGTGGTCCACGGA
TTTCAAGTATTTGGCTAGCGGAGGCAACGACAATCTGGTGAATGTTTGGT
CGGCGGCCAGCGGTGGCGTGGGAACTGCCACCGATCCCTTGCACAAATTC
AACGACCATCAAGCTGCAGTGCGTGCCTTGGCCTGGTGTCCCTGGCAACC
AAGTACTCTAGCCTCTGGAGGCGGCACCGCCGATCGCTGCATCAAGTTCT
GGAATGTGAACAATGGCACTTTAATGAAATCCGTGGACTCCAAGTCGCAG
GTCTGTTCTCTGCTCTTTTCTCGCCACTACAAGGAGCTGATCTCTGCGCA
TGGTTTTGCTAACAACCAACTGACCATTTGGAAATACCCAACAATGGTGA
AGCAAGCCGATTTGACTGGACACACGTCACGAGTTCTCCAGATGGCCATG
TCTCCGGACGGCAGCACAGTGATCAGCGCCGGAGCTGATGAAACCCTGCG
TCTTTGGAACTGCTTCGCTCCCGATCCGTTGGCGTCCAAGAAGGCAGTTT
CGACCAGCAAGGGCAAACAGAGCGTGTTCCGACAGAGCATCCGTGCAAGC
TTTCTAGACCAT

BO11532.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
fzy-RA 1581 CG4274-PA 1..1578 17..1594 7890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
fzy-RA 1996 CG4274-RA 146..1723 17..1594 7890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16311881..16312824 651..1594 4720 100 Plus
2L 23513712 2L 16311505..16311827 328..650 1615 100 Plus
2L 23513712 2L 16311101..16311414 17..330 1570 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:45:29 has no hits.

BO11532.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:21 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 1..1581 17..1597 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:05:32 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 169..1759 9..1601 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:40 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 146..1723 17..1596 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:21 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 169..1759 9..1601 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:39 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
fzy-RA 146..1723 17..1596 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:39 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16311101..16311412 17..328 100 -> Plus
2L 16311506..16311827 329..650 100 -> Plus
2L 16311881..16312824 651..1596 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:40 Download gff for BO11532.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16311506..16311827 329..650 100 -> Plus
arm_2L 16311881..16312824 651..1596 99   Plus
arm_2L 16311101..16311412 17..328 100 -> Plus

BO11532.pep Sequence

Translation from 16 to 1612

> BO11532.pep
MSQFNFVSDLQNALIMDGETRGPAPRWKKKLEASLNGSVNTTRSVLSVSY
NTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTPGGGDRFIPNRAATNFEL
AHFLVNKDSGDKSDEENDKATSSNSNESNVQASAHKGDRQKLISEVAQVG
DSKGGRILCYQNKAPAAPETHNNPLKVVYSIKTPISTKSGSRYIPTTSER
ILDAPDFINDYYLNLMDWSADNIVAVALGSCVYLWNAQTGNIEQLTEFEE
GDYAGSLSWIQEGQILAIGNSTGAVELWDCSKVKRLRVMDGHSARVGSLA
WNSFLVSSGSRDGTIVHHDVRAREHKLSTLSGHTQEVCGLKWSTDFKYLA
SGGNDNLVNVWSAASGGVGTATDPLHKFNDHQAAVRALAWCPWQPSTLAS
GGGTADRCIKFWNVNNGTLMKSVDSKSQVCSLLFSRHYKELISAHGFANN
QLTIWKYPTMVKQADLTGHTSRVLQMAMSPDGSTVISAGADETLRLWNCF
APDPLASKKAVSTSKGKQSVFRQSIRASFLDH

BO11532.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:43
Subject Length Description Subject Range Query Range Score Percent Strand
fzy-PA 526 CG4274-PA 1..526 1..526 2761 100 Plus
rap-PA 478 CG3000-PA 23..459 75..501 874 41.3 Plus
rap-PB 478 CG3000-PB 23..459 75..501 874 41.3 Plus
fzr2-PA 451 CG16783-PA 123..439 188..508 733 42.4 Plus
wds-PB 361 CG17437-PB 96..357 232..497 206 26.2 Plus