Clone Sequence Records
BO11576.5prime Sequence
326 bp (325 high quality bases) assembled on 2006-04-19
> BO11576.5prime
GAAGTTATCAGTCGACATGCAATTGACAAGTATTATCTGCGTCATCTTGT
TCCTTGGCTGTGTACTTATTAATGGACAAAGTCCCGACTGCCGAAAGTTA
AGGGACACTTGCAATCCTTGCATCCGAAGACTCAATAATCCCATCAATAA
TGTGGAGTTCATGAACGAGGGATGCCGTGAGAAAGTCCGTGGCAGATACA
TCTGGAAGAATCAGACTCGCTGCGATCTTCAAGTGATCGCTTGCAGTGCT
CACAAGAGGAAACTGGATTGCTTGGTAATAGCCGAGCTTGCTGGGATGCC
AAGGCGAACTGCAAGCTTTCTAGACC
BO11576.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:25:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7599-PA | 297 | Eig71Ef-RA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:04:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ef-RA | 420 | CG7599-RA | 34..327 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15657126..15657357 | 248..17 | 1160 | 100 | Minus |
3L | 28110227 | 3L | 15656748..15656810 | 310..248 | 315 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 05:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord2 | 7650 | accord2 QBERT 7650bp | 5149..5235 | 207..118 | 127 | 64.8 | Minus |
BO11576.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:28 Download gff for
BO11576.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7599-PA | 1..297 | 17..311 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:35:39 Download gff for
BO11576.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7599-PA | 1..297 | 17..311 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:55:01 Download gff for
BO11576.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 34..327 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:26:33 Download gff for
BO11576.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 34..327 | 17..310 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:33 Download gff for
BO11576.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15656748..15656809 | 249..310 | 100 | <- | Minus |
3L | 15657126..15657357 | 17..248 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:55:01 Download gff for
BO11576.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15649848..15649909 | 249..310 | 100 | <- | Minus |
arm_3L | 15650226..15650457 | 17..248 | 100 | -> | Minus |
BO11576.3prime Sequence
326 bp (325 high quality bases) assembled on 2006-04-19
> BO11576.3prime
ATGGTCTAGAAAGCTTGCAGTTCGCCTTGGCATCCCAGCAAGCTCGGCTA
TTACCAAGCAATCCAGTTTCCTCTTGTGAGCACTGCAAGCGATCACTTGA
AGATCGCAGCGAGTCTGATTCTTCCAGATGTATCTGCCACGGACTTTCTC
ACGGCATCCCTCGTTCATGAACTCCACATTATTGATGGGATTATTGAGTC
TTCGGATGCAAGGATTGCAAGTGTCCCTTAACTTTCGGCAGTCGGGACTT
TGTCCATTAATAAGTACACAGCCAAGGAACAAGATGACGCAGATAATACT
TGTCAATTGCATGTCGACTGATAACT
BO11576.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:25:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7599-PA | 297 | Eig71Ef-RA | 1..294 | 312..19 | 1470 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:43:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ef-RA | 420 | CG7599-RA | 34..327 | 312..19 | 1470 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:43:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15657126..15657357 | 81..312 | 1160 | 100 | Plus |
3L | 28110227 | 3L | 15656748..15656810 | 19..81 | 315 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 00:43:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord2 | 7650 | accord2 QBERT 7650bp | 5149..5235 | 122..211 | 127 | 64.8 | Plus |
BO11576.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:27 Download gff for
BO11576.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7599-PA | 1..297 | 18..312 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:35:38 Download gff for
BO11576.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7599-PA | 1..297 | 18..312 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:53:23 Download gff for
BO11576.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 34..327 | 19..312 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:07:34 Download gff for
BO11576.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 34..327 | 19..312 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:07:34 Download gff for
BO11576.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15656748..15656809 | 19..80 | 100 | <- | Plus |
3L | 15657126..15657357 | 81..312 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:53:23 Download gff for
BO11576.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15649848..15649909 | 19..80 | 100 | <- | Plus |
arm_3L | 15650226..15650457 | 81..312 | 100 | | Plus |
BO11576.complete Sequence
328 bp assembled on 2006-10-11
GenBank Submission: FJ632109
> BO11576.complete
GAAGTTATCAGTCGACATGCAATTGACAAGTATTATCTGCGTCATCTTGT
TCCTTGGCTGTGTACTTATTAATGGACAAAGTCCCGACTGCCGAAAGTTA
AGGGACACTTGCAATCCTTGCATCCGAAGACTCAATAATCCCATCAATAA
TGTGGAGTTCATGAACGAGGGATGCCGTGAGAAAGTCCGTGGCAGATACA
TCTGGAAGAATCAGACTCGCTGCGATCTTCAAGTGATCGCTTGCAGTGCT
CACAAGAGGAAACTGGATTGCTTGGTAATAGCCGAGCTTGCTGGGATGCC
AAGGCGAACTGCAAGCTTTCTAGACCAT
BO11576.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:06:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ef-RA | 297 | CG7599-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:06:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ef-RA | 420 | CG7599-RA | 34..327 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15657126..15657357 | 248..17 | 1160 | 100 | Minus |
3L | 28110227 | 3L | 15656748..15656810 | 310..248 | 315 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 11:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord2 | 7650 | accord2 QBERT 7650bp | 5149..5235 | 207..118 | 127 | 64.8 | Minus |
BO11576.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:50 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 1..297 | 17..311 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:27:08 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 45..338 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:20:47 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 34..327 | 17..312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:50 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 45..338 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:02 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ef-RA | 34..327 | 17..312 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:02 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15656746..15656809 | 249..312 | 96 | <- | Minus |
3L | 15657126..15657357 | 17..248 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:20:47 Download gff for
BO11576.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15649846..15649909 | 249..312 | 96 | <- | Minus |
arm_3L | 15650226..15650457 | 17..248 | 100 | | Minus |
BO11576.pep Sequence
Translation from 16 to 328
> BO11576.pep
MQLTSIICVILFLGCVLINGQSPDCRKLRDTCNPCIRRLNNPINNVEFMN
EGCREKVRGRYIWKNQTRCDLQVIACSAHKRKLDCLVIAELAGMPRRTAS
FLDH
BO11576.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ef-PA | 98 | CG7599-PA | 1..98 | 1..98 | 532 | 100 | Plus |
Eig71Eh-PB | 101 | CG7594-PB | 1..96 | 1..98 | 318 | 54.1 | Plus |
Eig71Ej-PA | 98 | CG7588-PA | 1..96 | 1..96 | 272 | 47.9 | Plus |
Eig71Ed-PA | 99 | CG7350-PA | 1..97 | 1..96 | 182 | 37.1 | Plus |
Eig71Ea-PA | 100 | CG16931-PA | 1..98 | 1..97 | 170 | 33.7 | Plus |