Clone Sequence Records
BO11586.5prime Sequence
314 bp (313 high quality bases) assembled on 2006-04-19
> BO11586.5prime
GAAGTTATCAGTCGACATGTCGTTCAAAGGAAATCCCAAGGTGCAGAAGG
TGATGGTGCAGCCCATCAACCTGATCTTCCGTTACCTGCAGAACCGGTCC
CGCGTGCAAGTTTGGTTATACGAGAACATATCGCTGCGCATCGAGGGCCA
CATTGTGGGATTCGATGAGTACATGAATCTGGTGCTGGACGACGCCGAGG
AAGTCTATGTGAAGACCCGGCAGCGCCGCAACCTCGGGAGGATCATGCTC
AAGGGCGACAACATCACGCTCATACAGAACGTCAGTCCCACGAAGGACGC
AAGCTTTCTAGACC
BO11586.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18591-PA | 285 | CG18591-RA | 1..282 | 17..298 | 1410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:22:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-RA | 521 | CG18591-RA | 108..389 | 17..298 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:22:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7885062..7885343 | 298..17 | 1410 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:22:03 has no hits.
BO11586.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:44 Download gff for
BO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-PA | 1..285 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:36:00 Download gff for
BO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-PA | 1..285 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 03:04:59 Download gff for
BO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 98..394 | 7..304 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:20:30 Download gff for
BO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 98..394 | 7..304 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:20:30 Download gff for
BO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7885057..7885353 | 7..304 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 03:04:59 Download gff for
BO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7885057..7885353 | 7..304 | 97 | | Minus |
BO11586.3prime Sequence
314 bp (313 high quality bases) assembled on 2006-04-19
> BO11586.3prime
ATGGTCTAGAAAGCTTGCGTCCTTCGTGGGACTGACGTTCTGTATGAGCG
TGATGTTGTCGCCCTTGAGCATGATCCTCCCGAGGTTGCGGCGCTGCCGG
GTCTTCACATAGACTTCCTCGGCGTCGTCCAGCACCAGATTCATGTACTC
ATCGAATCCCACAATGTGGCCCTCGATGCGCAGCGATATGTTCTCGTATA
ACCAAACTTGCACGCGGGACCGGTTCTGCAGGTAACGGAAGATCAGGTTG
ATGGGCTGCACCATCACCTTCTGCACCTTGGGATTTCCTTTGAACGACAT
GTCGACTGATAACT
BO11586.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18591-PA | 285 | CG18591-RA | 1..282 | 300..19 | 1410 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:52:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-RA | 521 | CG18591-RA | 108..389 | 300..19 | 1410 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:52:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7885062..7885343 | 19..300 | 1410 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:52:15 has no hits.
BO11586.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:44 Download gff for
BO11586.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-PA | 1..285 | 18..300 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:35:59 Download gff for
BO11586.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-PA | 1..285 | 18..300 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:36:43 Download gff for
BO11586.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 98..394 | 13..310 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:35:15 Download gff for
BO11586.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 98..394 | 13..310 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:35:15 Download gff for
BO11586.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7885057..7885353 | 13..310 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:36:43 Download gff for
BO11586.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7885057..7885353 | 13..310 | 97 | | Plus |
BO11586.complete Sequence
316 bp assembled on 2006-10-11
GenBank Submission: FJ632115
> BO11586.complete
GAAGTTATCAGTCGACATGTCGTTCAAAGGAAATCCCAAGGTGCAGAAGG
TGATGGTGCAGCCCATCAACCTGATCTTCCGTTACCTGCAGAACCGGTCC
CGCGTGCAAGTTTGGTTATACGAGAACATATCGCTGCGCATCGAGGGCCA
CATTGTGGGATTCGATGAGTACATGAATCTGGTGCTGGACGACGCCGAGG
AAGTCTATGTGAAGACCCGGCAGCGCCGCAACCTCGGGAGGATCATGCTC
AAGGGCGACAACATCACGCTCATACAGAACGTCAGTCCCACGAAGGACGC
AAGCTTTCTAGACCAT
BO11586.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:43:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-RA | 285 | CG18591-PA | 1..282 | 17..298 | 1410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:43:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-RA | 521 | CG18591-RA | 108..389 | 17..298 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:43:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7885062..7885343 | 298..17 | 1410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:43:21 has no hits.
BO11586.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:18 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 1..285 | 17..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:05:29 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 73..369 | 7..304 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:33:36 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 108..389 | 17..300 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:19 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 73..369 | 7..304 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:25:17 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 108..389 | 17..300 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:25:17 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7885060..7885343 | 17..300 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:33:36 Download gff for
BO11586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7885060..7885343 | 17..300 | 99 | | Minus |
BO11586.pep Sequence
Translation from 16 to 316
> BO11586.pep
MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFD
EYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITLIQNVSPTKDASFLDH
BO11586.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-PA | 94 | CG18591-PA | 1..94 | 1..94 | 482 | 100 | Plus |