Clone Sequence Records
BO11593.3prime Sequence
392 bp (391 high quality bases) assembled on 2006-04-19
> BO11593.3prime
ATGGTCTAGAAAGCTTGCCTTCCGCTGTCTGGACTTTTGGGCCAGATCCT
TGGCGTAGGCCACGAACAGGATGTTGTGCTTGCTGGCCACCGGTTTCCCG
TCATCCTGATCGTATCGCACCTGCAGGGTATCCGAGTCCAGGGTAATACT
GCCCACCGGCTGACCCGGTTTGATGTAATAGTTCTGGCCCAACGAAGTGG
GTCTATGCTCGGTGACGAAGTGATAACGCATCGGTTCCATCTCCTCAATG
ACCAGCTTGGGTCTGCTTGTGGTCACATTGATGAGCATCGGTTCCATTTC
CGTCTGGCTCACCGGTTGGGCGCCAGTTGAAGCTAACAGCGCCATTGCAA
CGATGACAACACTTGATTTGGTCCACATGTCGACTGATAACT
BO11593.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-PB | 363 | CG12481-RB | 1..360 | 378..19 | 1800 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:51:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 589 | CG12481-RB | 26..386 | 379..19 | 1805 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:51:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14187278..14187638 | 379..19 | 1805 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:51:20 has no hits.
BO11593.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:57 Download gff for
BO11593.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 16..378 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:36:19 Download gff for
BO11593.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 16..378 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 12:53:14 Download gff for
BO11593.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 18..390 | 15..392 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:08:08 Download gff for
BO11593.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 18..390 | 15..392 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:08:08 Download gff for
BO11593.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14187270..14187642 | 15..392 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 12:53:14 Download gff for
BO11593.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14081303..14081675 | 15..392 | 98 | | Minus |
BO11593.5prime Sequence
392 bp (391 high quality bases) assembled on 2006-04-19
> BO11593.5prime
GAAGTTATCAGTCGACATGTGGACCAAATCAAGTGTTGTCATCGTTGCAA
TGGCGCTGTTAGCTTCAACTGGCGCCCAACCGGTGAGCCAGACGGAAATG
GAACCGATGCTCATCAATGTGACCACAAGCAGACCCAAGCTGGTCATTGA
GGAGATGGAACCGATGCGTTATCACTTCGTCACCGAGCATAGACCCACTT
CGTTGGGCCAGAACTATTACATCAAACCGGGTCAGCCGGTGGGCAGTATT
ACCCTGGACTCGGATACCCTGCAGGTGCGATACGATCAGGATGACGGGAA
ACCGGTGGCCAGCAAGCACAACATCCTGTTCGTGGCCTACGCCAAGGATC
TGGCCCAAAAGTCCAGACAGCGGAAGGCAAGCTTTCTAGACC
BO11593.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-PB | 363 | CG12481-RB | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:14:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 589 | CG12481-RB | 26..386 | 16..376 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:14:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14187278..14187638 | 16..376 | 1805 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:14:17 has no hits.
BO11593.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:58 Download gff for
BO11593.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 17..379 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:36:20 Download gff for
BO11593.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 17..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:18:36 Download gff for
BO11593.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..390 | 5..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:06:42 Download gff for
BO11593.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..390 | 5..380 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:06:42 Download gff for
BO11593.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14187271..14187642 | 5..380 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:18:36 Download gff for
BO11593.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14081304..14081675 | 5..380 | 98 | | Plus |
BO11593.complete Sequence
394 bp assembled on 2006-10-11
GenBank Submission: FJ632119
> BO11593.complete
GAAGTTATCAGTCGACATGTGGACCAAATCAAGTGTTGTCATCGTTGCAA
TGGCGCTGTTAGCTTCAACTGGCGCCCAACCGGTGAGCCAGACGGAAATG
GAACCGATGCTCATCAATGTGACCACAAGCAGACCCAAGCTGGTCATTGA
GGAGATGGAACCGATGCGTTATCACTTCGTCACCGAGCATAGACCCACTT
CGTTGGGCCAGAACTATTACATCAAACCGGGTCAGCCGGTGGGCAGTATT
ACCCTGGACTCGGATACCCTGCAGGTGCGATACGATCAGGATGACGGGAA
ACCGGTGGCCAGCAAGCACAACATCCTGTTCGTGGCCTACGCCAAGGATC
TGGCCCAAAAGTCCAGACAGCGGAAGGCAAGCTTTCTAGACCAT
BO11593.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:25:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 363 | CG12481-PB | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:25:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 589 | CG12481-RB | 26..386 | 16..376 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:25:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14187278..14187638 | 16..376 | 1805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:25:09 has no hits.
BO11593.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:06:20 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 1..363 | 17..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:21:46 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..390 | 5..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:47 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 27..386 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:06:21 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..390 | 5..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:07 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 27..386 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:07 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14187279..14187638 | 17..378 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:47 Download gff for
BO11593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14081312..14081671 | 17..378 | 99 | | Plus |
BO11593.pep Sequence
Translation from 16 to 394
> BO11593.pep
MWTKSSVVIVAMALLASTGAQPVSQTEMEPMLINVTTSRPKLVIEEMEPM
RYHFVTEHRPTSLGQNYYIKPGQPVGSITLDSDTLQVRYDQDDGKPVASK
HNILFVAYAKDLAQKSRQRKASFLDH
BO11593.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:03:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-PB | 120 | CG12481-PB | 1..120 | 1..120 | 613 | 100 | Plus |