Clone Sequence Records
BO11594.3prime Sequence
515 bp (514 high quality bases) assembled on 2006-04-19
> BO11594.3prime
ATGGTCTAGAAAGCTTGCTTTTCCGTTCTTCTTTTTGGAACCTCCTCCGG
TGGCTTTTTGAGTGCGCCCCAACTGCATTTCCTTTAACTTAGCATCCAGA
CGCTTTTTCGCATTCTTCACATCCTCCTCCTGCCTGATGGTTTTCGCCGG
CTTTGGGTGCAGAAACTTCTTGCGCTCGTCCCGCTTAATCTCCTCGCCAC
ATCCGTGCACCTCTGGCAGTCCGTGCTTGAAGCAGAATCTCTTCTTGCAA
TGCTGGCAGTCTTGGCCCATCAGGCTGGTTTTGGTTTTGCAGCGCGGATA
GTCGCAGAGGTTATCCACTTCCTTGACGGCTGTCAGCACATCGTCCAGCT
TTAGATCCACCACCTGGCTGGGAATCCGCTCCAGTAGCTCCAATGTGTTG
TTTGTCCCATAGTCAACTCTTTTTCCTGGTTTTGCGGGCGGGAACAGGGG
AGCATCTTCAGTTTTCGACGAGGTAGAGGGTTTGTTTGGATCGTCTGCCA
TGTCGACTGATAACT
BO11594.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-PA | 486 | CG30094-RA | 1..483 | 501..19 | 2215 | 98.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 675 | CG30094-RA | 87..569 | 501..19 | 2295 | 98.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16142350..16142829 | 498..19 | 2280 | 98.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:26:54 has no hits.
BO11594.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:10:59 Download gff for
BO11594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 18..501 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:36:21 Download gff for
BO11594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 18..501 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:48:13 Download gff for
BO11594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..569 | 19..506 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:59:08 Download gff for
BO11594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..569 | 19..506 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:59:08 Download gff for
BO11594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16142350..16142829 | 19..498 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:48:13 Download gff for
BO11594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12029855..12030334 | 19..498 | 98 | | Minus |
BO11594.5prime Sequence
515 bp (514 high quality bases) assembled on 2006-04-19
> BO11594.5prime
GAAGTTATCAGTCGACATGGCAGACGATCCAAACAAACCCTCTACCTCGT
CGAAAACTGAAGATGCTCCCCTGTTCCCGCCCGCAAAACCAGGAAAAAGA
GTTGACTATGGGACAAACAACACATTGGAGCTACTGGAGCGGATTCCCAG
CCAGGTGGTGGATCTAAAGCTGGACGATGTGCTGACAGCCGTCAAGGAAG
TGGATAACCTCTGCGACTATCCGCGCTGCAAAACCAAAACCAGCCTGATG
GGCCAAGACTGCCAGCATTGCAAGAAGAGATTCTGCTTCAAGCACGGACT
GCCAGAGGTGCACGGATGTGGCGAGGAGATTAAGCGGGACGAGCGCAAGA
AGTTTCTGCACCCAAAGCCGGCGAAAACCATCAGGCAGGAGGAGGATGTG
AAGAATGCGAAAAAGCGTCTGGATGCTAAGTTAAAGGAAATGCAGTTGGG
GCGCACTCAAAAAGCCACCGGAGGAGGTTCCAAAAAGAAGAACGGAAAAG
CAAGCTTTCTAGACC
BO11594.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-PA | 486 | CG30094-RA | 1..483 | 17..499 | 2215 | 98.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 05:19:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 675 | CG30094-RA | 87..569 | 17..499 | 2295 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 05:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16142350..16142829 | 20..499 | 2280 | 98.3 | Plus |
Blast to na_te.dros performed on 2015-02-04 05:19:53 has no hits.
BO11594.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:11:00 Download gff for
BO11594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 17..500 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:36:23 Download gff for
BO11594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 17..500 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 07:11:17 Download gff for
BO11594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..569 | 12..499 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 06:43:50 Download gff for
BO11594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..569 | 12..499 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 06:43:50 Download gff for
BO11594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16142350..16142829 | 20..499 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 07:11:17 Download gff for
BO11594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12029855..12030334 | 20..499 | 98 | | Plus |
BO11594.complete Sequence
517 bp assembled on 2006-10-11
GenBank Submission: FJ632120
> BO11594.complete
GAAGTTATCAGTCGACATGGCAGACGATCCAAACAAACCCTCTACCTCGT
CGAAAACTGAAGATGCTCCCCTGTTCCCGCCCGCAAAACCAGGAAAAAGA
GTTGACTATGGGACAAACAACACATTGGAGCTACTGGAGCGGATTCCCAG
CCAGGTGGTGGATCTAAAGCTGGACGATGTGCTGACAGCCGTCAAGGAAG
TGGATAACCTCTGCGACTATCCGCGCTGCAAAACCAAAACCAGCCTGATG
GGCCAAGACTGCCAGCATTGCAAGAAGAGATTCTGCTTCAAGCACGGACT
GCCAGAGGTGCACGGATGTGGCGAGGAGATTAAGCGGGACGAGCGCAAGA
AGTTTCTGCACCCAAAGCCGGCGAAAACCATCAGGCAGGAGGAGGATGTG
AAGAATGCGAAAAAGCGTCTGGATGCTAAGTTAAAGGAAATGCAGTTGGG
GCGCACTCAAAAAGCCACCGGAGGAGGTTCCAAAAAGAAGAACGGAAAAG
CAAGCTTTCTAGACCAT
BO11594.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:40:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 486 | CG30094-PA | 1..483 | 17..499 | 2295 | 98.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:40:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 675 | CG30094-RA | 87..569 | 17..499 | 2295 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:40:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16142350..16142829 | 20..499 | 2280 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:40:42 has no hits.
BO11594.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:42 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 1..486 | 17..500 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:25 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 54..539 | 12..499 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:04 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 87..565 | 17..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:42 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 54..539 | 12..499 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:39 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 87..565 | 17..495 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:39 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16142348..16142825 | 17..495 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:04 Download gff for
BO11594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12029853..12030330 | 17..495 | 97 | | Plus |
BO11594.pep Sequence
Translation from 16 to 517
> BO11594.pep
MADDPNKPSTSSKTEDAPLFPPAKPGKRVDYGTNNTLELLERIPSQVVDL
KLDDVLTAVKEVDNLCDYPRCKTKTSLMGQDCQHCKKRFCFKHGLPEVHG
CGEEIKRDERKKFLHPKPAKTIRQEEDVKNAKKRLDAKLKEMQLGRTQKA
TGGGSKKKNGKASFLDH
BO11594.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-PA | 161 | CG30094-PA | 1..161 | 1..161 | 862 | 100 | Plus |
