Clone BO11621 Report

Search the DGRC for BO11621

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:116
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG32694-RA
Protein status:BO11621.pep: validated full length
Sequenced Size:1081

Clone Sequence Records

BO11621.3prime Sequence

909 bp (813 high quality bases) assembled on 2006-04-19

> BO11621.3prime
ATGGTCTAGAAAGCTTGCGATCAGCGCCGTTATCAGCTTGGCCTTGAAGT
TCACGAACTTCTCGCTGGTGGCCGCAACGCGCAGAATCAAATCCTGGACG
AGATTGGCCAGACCGCGATTGGCCAGCACCACGAGGCGCGTGACTGGGCC
GGGAATGCCCTCGGTGTAGCCATCGGCGTTGCGAGTGCTATCGCCATCGG
CGTCACCATCGCCGCCCAAACTGCCGCTGCTACTGCTGCTGCCTGCACTG
CCGCCCACCGAGTTGGCCGCCTCATCGCCCTGCTGGGTCTGAACACTGCC
CGAAAAGAGCCTCACCACATCCAGCAGGAAGTTGCCGGAGCCGCCGGCTC
CCAGAGCATTGCCACTGGGCGAACCTCCTGCACCGCCGCTTGAGCCGCCG
GCGAGACCCGCACCGCCAAAGCTGAGGAACCTTTTGAACAGATTACTCTT
GTTGCGATCGTCCAGATCGGCGGTCTCCTCCGCAGAGTCTAGGGTGAGTT
CATCGATCGCCGGCGACTTGGACTCGGAGAGCTGGAGATCATTGGTGCTC
AGGGCCTTTTCGTTCACACCGGAGGACGGCGAGACACTGGGCAGTTCGTT
GTTGAAGCTCAGCTGGATGGGCTCGTTGGATTTGAGGGGAATGGGAGCCT
GGGCGACCGGCGAGGAGGCGGAGGACGAGGATGGGGACAGGGACTGGGCG
GCAACTGCGGCGGCGGCTGCTTCCGCCTCCTTCACCTGGCGGGCCACACG
GATTGTCTCCTCCAATTGCTTGTTGATGGCCGACAAATCGATCTGGGTAT
CAGTGGCTCCATTCTTGGTGATGTCGGGGAAAAGTTCGCGCAGCAGTCCA
ATCGTTCGTTTGTTGCGATCGGCTATCAATGATTCTTGGTCTTTGGCGCC
CAATGTCAA

BO11621.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-PA 1050 CG32694-RA 157..1047 909..19 4430 99.8 Minus
CG32694-PC 1050 CG32694-RC 157..1047 909..19 4430 99.8 Minus
CG32694-PD 564 CG32694-RD 157..252 909..814 480 100 Minus
CG32694-PB 1095 CG32694-RB 157..252 909..814 480 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-RC 2528 CG32694-RC 491..1381 909..19 4440 99.9 Minus
CG32694-RA 2440 CG32694-RA 403..1293 909..19 4440 99.9 Minus
CG32694-RF 2425 CG32694-RF 403..1278 909..19 4205 98.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10004389..10004759 816..446 1855 100 Minus
X 23542271 X 10005374..10005602 310..82 1130 99.6 Minus
X 23542271 X 10005148..10005289 451..310 695 99.3 Minus
X 23542271 X 9999205..9999300 909..814 480 100 Minus
X 23542271 X 10005672..10005735 82..19 320 100 Minus
Blast to na_te.dros performed on 2015-02-12 01:04:00 has no hits.

BO11621.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:11:43 Download gff for BO11621.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-PC 159..1050 15..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:37:23 Download gff for BO11621.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-PC 159..1050 15..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:55:23 Download gff for BO11621.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-RA 405..1297 14..907 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:52:18 Download gff for BO11621.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-RA 405..1297 14..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:52:18 Download gff for BO11621.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9999207..9999300 814..907 100 -> Minus
X 10004392..10004759 446..813 100 -> Minus
X 10005154..10005289 310..445 100 -> Minus
X 10005375..10005602 82..309 99 -> Minus
X 10005673..10005739 14..81 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:55:23 Download gff for BO11621.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9893240..9893333 814..907 100 -> Minus
arm_X 9898425..9898792 446..813 100 -> Minus
arm_X 9899187..9899322 310..445 100 -> Minus
arm_X 9899408..9899635 82..309 99 -> Minus
arm_X 9899706..9899772 14..81 97   Minus

BO11621.5prime Sequence

869 bp (829 high quality bases) assembled on 2006-04-19

> BO11621.5prime
GAAGTTATCAGTCGACATGAGGCAGCCAAGTAGACAGCACATCCTGGCGC
TCCTGATCCTCGGCAGCGCCGCCTGCCTCATCAGCGCCGTACCGCTACCG
CAGCCCGCCAACGGTAATTCCGAGCTGGACGTCCTCCAAATCCCGCTTGC
CAATGGCAAGGAAATCGATGTCTTGACATTGGGCGCCAAAGACCAAGAAT
CATTGATAGCCGATCGCAACAAACGAACGATTGGACTGCTGCGCGAACTT
TTCCCCGACATCACCAAGAATGGAGCCACTGATACCCAGATCGATTTGTC
GGCCATCAACAAGCAATTGGAGGAGACAATCCGTGTGGCCCGCCAGGTGA
AGGAGGCGGAAGCAGCCGCCGCCGCAGTTGCCGCCCAGTCCCTGTCCCCA
TCCTCGTCCTCCGCCTCCTCGCCGGTCGCCCAGGCTCCCATTCCCCTCAA
ATCCAACGAGCCCATCCAGCTGAGCTTCAACAACGAACTGCCCAGTGTCT
CGCCGTCCTCCGGTGTGAACGAAAAGGCCCTGAGCACCAATGATCTCCAG
CTCTCCGAGTCCAAGTCGCCGGCGATCGATGAACTCACCCTAGACTCTGC
GGAGGAGACCGCCGATCTGGACGATCGCAACAAGAGTAATCTGTTCAAAA
GGTTCCTCAGCTTTGGCGGTGCGGGTCTCGCCGGCGGCTCAAGCGGCGGT
GCAGGAGGTTCGCCCAGTGGCAATGCTCTGGGAGCCGGCGGCTCCGGCAA
CTTCCTGCTGGATGTGGTGAGGCTCTTTTCGGGCAGTGTTCAGACCCAGC
AGGGCGATGAGGCGGCCAACTCGGTGGGCGGCAATGCAGGCAGCAGCAGT
AGCAGCGGCAGTTTGGGCG

BO11621.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-PA 1050 CG32694-RA 1..853 17..869 4215 99.7 Plus
CG32694-PC 1050 CG32694-RC 1..853 17..869 4215 99.7 Plus
CG32694-PB 1095 CG32694-RB 1..252 17..268 1260 100 Plus
CG32694-PD 564 CG32694-RD 1..252 17..268 1260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-RC 2528 CG32694-RC 334..1187 16..869 4240 99.8 Plus
CG32694-RA 2440 CG32694-RA 246..1099 16..869 4240 99.8 Plus
CG32694-RF 2425 CG32694-RF 246..1084 16..869 4005 98 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10004389..10004759 266..636 1855 100 Plus
X 23542271 X 9993045..9993190 16..161 730 100 Plus
X 23542271 X 10005148..10005289 631..772 695 99.3 Plus
X 23542271 X 9999191..9999300 159..268 550 100 Plus
X 23542271 X 10005374..10005471 772..869 460 98 Plus
Blast to na_te.dros performed on 2015-02-11 16:33:39 has no hits.

BO11621.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:11:44 Download gff for BO11621.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-PC 1..853 17..869 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:37:24 Download gff for BO11621.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-PC 1..853 17..869 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:44:58 Download gff for BO11621.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-RA 243..1099 9..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:19:05 Download gff for BO11621.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32694-RA 243..1099 9..869 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:19:05 Download gff for BO11621.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10005375..10005471 773..869 97   Plus
X 9993042..9993189 9..160 97 -> Plus
X 9999193..9999300 161..268 100 -> Plus
X 10004392..10004759 269..636 100 -> Plus
X 10005154..10005289 637..772 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:44:58 Download gff for BO11621.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9899408..9899504 773..869 97   Plus
arm_X 9887075..9887222 9..160 97 -> Plus
arm_X 9893226..9893333 161..268 100 -> Plus
arm_X 9898425..9898792 269..636 100 -> Plus
arm_X 9899187..9899322 637..772 100 -> Plus

BO11621.complete Sequence

1081 bp assembled on 2006-10-11

GenBank Submission: FJ632131

> BO11621.complete
GAAGTTATCAGTCGACATGAGGCAGCCAAGTAGACAGCACATCCTGGCGC
TCCTGATCCTCGGCAGCGCCGCCTGCCTCATCAGCGCCGTACCGCTACCG
CAGCCCGCCAACGGTAATTCCGAGCTGGACGTCCTCCAAATCCCGCTTGC
CAATGGCAAGGAAATCGATGTCTTGACATTGGGCGCCAAAGACCAAGAAT
CATTGATAGCCGATCGCAACAAACGAACGATTGGACTGCTGCGCGAACTT
TTCCCCGACATCACCAAGAATGGAGCCACTGATACCCAGATCGATTTGTC
GGCCATCAACAAGCAATTGGAGGAGACAATCCGTGTGGCCCGCCAGGTGA
AGGAGGCGGAAGCAGCCGCCGCCGCAGTTGCCGCCCAGTCCCTGTCCCCA
TCCTCGTCCTCCGCCTCCTCGCCGGTCGCCCAGGCTCCCATTCCCCTCAA
ATCCAACGAGCCCATCCAGCTGAGCTTCAACAACGAACTGCCCAGTGTCT
CGCCGTCCTCCGGTGTGAACGAAAAGGCCCTGAGCACCAATGATCTCCAG
CTCTCCGAGTCCAAGTCGCCGGCGATCGATGAACTCACCCTAGACTCTGC
GGAGGAGACCGCCGATCTGGACGATCGCAACAAGAGTAATCTGTTCAAAA
GGTTCCTCAGCTTTGGCGGTGCGGGTCTCGCCGGCGGCTCAAGCGGCGGT
GCAGGAGGTTCGCCCAGTGGCAATGCTCTGGGAGCCGGCGGCTCCGGCAA
CTTCCTGCTGGATGTGGTGAGGCTCTTTTCGGGCAGTGTTCAGACCCAGC
AGGGCGATGAGGCGGCCAACTCGGTGGGCGGCAGTGCAGGCAGCAGCAGT
AGCAGCGGCAGTTTGGGCGGCGATGGTGACGCCGATGGCGATAGCACTCG
CAACGCCGATGGCTACACCGAGGGCATTCCCGGCCCAGTCACGCGCCTCG
TGGTGCTGGCCAATCGCGGTCTGGCCAATCTCGTCCAGGATTTGATTCTG
CGCGTTGCGGCCACCAGCGAGAAGTTCGTGAACTTCAAGGCCAAGCTGAT
AACGGCGCTGATCGCAAGCTTTCTAGACCAT

BO11621.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-RC 1050 CG32694-PC 1..1047 17..1063 5220 99.9 Plus
CG32694-RA 1050 CG32694-PA 1..1047 17..1063 5220 99.9 Plus
CG32694-RF 1035 CG32694-PF 1..1032 17..1063 4960 98.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-RC 2528 CG32694-RC 334..1381 16..1063 5225 99.9 Plus
CG32694-RA 2440 CG32694-RA 246..1293 16..1063 5225 99.9 Plus
CG32694-RF 2425 CG32694-RF 246..1278 16..1063 4965 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:22:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10004389..10004759 266..636 1855 100 Plus
X 23542271 X 10005374..10005602 772..1000 1130 99.6 Plus
X 23542271 X 9993045..9993190 16..161 730 100 Plus
X 23542271 X 10005148..10005289 631..772 695 99.3 Plus
X 23542271 X 9999191..9999300 159..268 550 100 Plus
X 23542271 X 10005672..10005735 1000..1063 320 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:22:35 has no hits.

BO11621.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:24:25 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RC 1..1050 17..1067 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:50:52 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RC 335..1381 17..1065 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:12 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RA 247..1293 17..1065 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:24:25 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RC 331..1385 9..1068 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:41 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RA 247..1293 17..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:41 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
X 10005375..10005602 773..1000 99 -> Plus
X 10005673..10005735 1001..1065 96   Plus
X 9993046..9993189 17..160 100 -> Plus
X 9999193..9999300 161..268 100 -> Plus
X 10004392..10004759 269..636 100 -> Plus
X 10005154..10005289 637..772 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:12 Download gff for BO11621.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9887079..9887222 17..160 100 -> Plus
arm_X 9893226..9893333 161..268 100 -> Plus
arm_X 9898425..9898792 269..636 100 -> Plus
arm_X 9899187..9899322 637..772 100 -> Plus
arm_X 9899408..9899635 773..1000 99 -> Plus
arm_X 9899706..9899768 1001..1065 96   Plus

BO11621.pep Sequence

Translation from 16 to 1081

> BO11621.pep
MRQPSRQHILALLILGSAACLISAVPLPQPANGNSELDVLQIPLANGKEI
DVLTLGAKDQESLIADRNKRTIGLLRELFPDITKNGATDTQIDLSAINKQ
LEETIRVARQVKEAEAAAAAVAAQSLSPSSSSASSPVAQAPIPLKSNEPI
QLSFNNELPSVSPSSGVNEKALSTNDLQLSESKSPAIDELTLDSAEETAD
LDDRNKSNLFKRFLSFGGAGLAGGSSGGAGGSPSGNALGAGGSGNFLLDV
VRLFSGSVQTQQGDEAANSVGGSAGSSSSSGSLGGDGDADGDSTRNADGY
TEGIPGPVTRLVVLANRGLANLVQDLILRVAATSEKFVNFKAKLITALIA
SFLDH

BO11621.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:04:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-PC 349 CG32694-PC 1..349 1..349 1707 100 Plus
CG32694-PA 349 CG32694-PA 1..349 1..349 1707 100 Plus
CG32694-PF 344 CG32694-PF 1..344 1..349 1666 98.6 Plus
CG32694-PG 195 CG32694-PG 1..185 1..166 435 55.7 Plus
CG32694-PE 187 CG32694-PE 1..142 1..135 429 70.4 Plus