Clone BO11632 Report

Search the DGRC for BO11632

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:116
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG1246-RB
Protein status:BO11632.pep: validated full length
Sequenced Size:1345

Clone Sequence Records

BO11632.3prime Sequence

895 bp (763 high quality bases) assembled on 2006-04-19

> BO11632.3prime
ATGGTCTAGAAAGCTTGCGTGATCCGCGTAGTCGGGTTCCGGAATCTGCG
GGTAGATCTGTACTTGAAGTTGTGGCTTGCGTGGCGGCGGTGGTGGCTTA
GTCACCATGCTGGTGTACGACCAAGGCATCTGGTTGCGCAGCTCTTCGCT
AACGCGGGGATTTACGGGAGCAGGATATATCTCGCTGTAGCGATTGTTTA
GTGGCGACGTCACCGCCAGTTGTTGGACAGCCGGCGAAGGAGCACGTGGA
GTTTGTGGCTCCGAAGGTGGATAGTTGAGGTGGTCGGGATGAGCCTCGGT
GGTGCGATAGGTGTTGATGTCAGGCTGCGGGGACACAACATCTCTCTGCT
GAGGAACTTGTGGTGGTAGCACCATCACCGGCGATTGCAAAGTGGTGCGA
TCTCCGGGTGCGAACTGCTGGGAGTTTGGACGCTGGGCACCCTGCTCCGA
GGGAATGAAAATGGGCAGCGGCTTGGGTCGGATCTGCTCCGGATATTGAG
GGCTCTCTTGCGGGGCCGAAGGCTGAATGGATTCCACTAGCGTGGCCTCC
ACCACCGGCTGGACTAATGCCACCGCAGGCTGTGGTGTCGGCTGTCGGGT
GGGAGCCTGGCTCCTGCTCAAGGCGGCTGATTTCGCATTCTGCTCCGCCA
TGATTCCGGACAACGAGAGACAGAAGGTAACTCCAATGATGTTCAGCAGC
CAGATGATGGCTACGCGACTTGTGAGGCACAGTAGAAGAATCGATGGCGT
CGAGAAGTATACGCCGAAGGGCTCCATTAGAGTCCAGACATTACTAACAT
TTTCGCTATATGAGACTCCAATGTAATCAAGTGCATCTTTCATGGACGTT
GTATGACTTATGTCGATTCCATGATACACCGTGGCCACCACATCT

BO11632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-PB 1314 CG1246-RB 435..1311 895..19 4360 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 03:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-RD 1840 CG1246-RD 843..1719 895..19 4370 99.9 Minus
CG1246-RC 1674 CG1246-RC 677..1553 895..19 4370 99.9 Minus
CG1246-RE 1527 CG1246-RE 530..1406 895..19 4370 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 03:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2649256..2650084 847..19 4130 99.9 Minus
3L 28110227 3L 2649157..2649205 895..847 245 100 Minus
Blast to na_te.dros performed on 2015-02-09 03:40:48 has no hits.

BO11632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:03 Download gff for BO11632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-PB 435..1314 18..895 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:37:54 Download gff for BO11632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-PB 435..1314 18..895 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:57:21 Download gff for BO11632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-RB 652..1528 19..895 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:28:25 Download gff for BO11632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-RE 530..1406 19..895 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:28:25 Download gff for BO11632.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 2649157..2649205 847..895 100 -> Minus
3L 2649257..2650084 19..846 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:57:21 Download gff for BO11632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2649157..2649205 847..895 100 -> Minus
arm_3L 2649257..2650084 19..846 99   Minus

BO11632.5prime Sequence

859 bp (792 high quality bases) assembled on 2006-04-19

> BO11632.5prime
GAAGTTATCAGTCGACATGGCCGGCATGGGCACTGGATTTTCCAAGTGCT
TTATACTCTTCATGGCAATTGTCATACTCGTCCAGGGAGTTGCCTACTTG
GGCTTGTCCATCTGGGGCATCACCTTCCGAGATTGTCCGGATGGCGTTAC
TGATTTCAGCGAAAATCCCTTCAAGTACGCCATGGAGCTCATTTACTTTG
CACAGGAGGAATGTGGTGAGCCGGTGCTGAAGGTGGCAGACGAACAATTT
AGTTTGAACATAGATTGGCAGACGTCCTATGCCATTACCAACCGGGAGTT
CATCTTCATGATAACCTACGCAGTTATTAGCGGAGTCTGGGTAGCCACTT
CGGTGTTGGTAATAACCACTTTGTGCAATCGCACCACCAAGCTGATCTCC
GGAGTGGTCTATTGGCCCTGGTTCCTATCCGTGCTAGCTGGCAGTATCCT
AGATGTGGTGGCCACGGTGTATCATGGAATCGACATAAGTCATACAACGT
CCATGAAAGATGCACTTGATTACATTGGAGTCTCATATAGCGAAATTGTT
AGTAATGTCTGGACTCTAATGGAGCCCTTCGGCGTATACTTCTCGACGCC
ATCGATTCTTCTACTGTGCCTCACAAGTCGCGTAGCCATCATCTGGCTGC
TGAACATCATTGGAGTTACCTTCTGTCTCTCGTTGTCCGGAATCATGGCG
GAGCAGAATGCGAAATCAGCCGCCTTGAGCAGGAGCCAGGCTCCCACCCG
ACAGCCGACACCACAGCCTGCGGTGGCATTAGTCCAGCCGGTGGTGGAGG
CCACGCTAGTGGAATCCATTCAGCCTTCGGCCCCGCAAGAGAGCCCTCAA
TATCCGGAG

BO11632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-PB 1314 CG1246-RB 1..843 17..859 4215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-RD 1840 CG1246-RD 409..1251 17..859 4215 100 Plus
CG1246-RC 1674 CG1246-RC 243..1085 17..859 4215 100 Plus
CG1246-RE 1527 CG1246-RE 96..938 17..859 4215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2649256..2649616 499..859 1805 100 Plus
3L 28110227 3L 2648856..2649017 204..365 810 100 Plus
3L 28110227 3L 2649072..2649205 366..499 670 100 Plus
3L 28110227 3L 2648664..2648787 80..203 620 100 Plus
3L 28110227 3L 2648532..2648596 17..81 325 100 Plus
Blast to na_te.dros performed on 2015-02-12 20:00:44 has no hits.

BO11632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:03 Download gff for BO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-PB 1..843 17..859 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:37:56 Download gff for BO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-PB 1..843 17..859 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 11:52:39 Download gff for BO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-RB 211..1060 9..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:29:32 Download gff for BO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1246-RE 89..938 9..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:29:32 Download gff for BO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2648525..2648594 9..79 95 -> Plus
3L 2648664..2648787 80..203 100 -> Plus
3L 2648856..2649017 204..365 100 -> Plus
3L 2649072..2649205 366..499 100 -> Plus
3L 2649257..2649616 500..859 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 11:52:39 Download gff for BO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2648525..2648594 9..79 95 -> Plus
arm_3L 2648664..2648787 80..203 100 -> Plus
arm_3L 2648856..2649017 204..365 100 -> Plus
arm_3L 2649072..2649205 366..499 100 -> Plus
arm_3L 2649257..2649616 500..859 100   Plus

BO11632.complete Sequence

1345 bp assembled on 2006-10-11

GenBank Submission: FJ632135

> BO11632.complete
GAAGTTATCAGTCGACATGGCCGGCATGGGCACTGGATTTTCCAAGTGCT
TTATACTCTTCATGGCAATTGTCATACTCGTCCAGGGAGTTGCCTACTTG
GGCTTGTCCATCTGGGGCATCACCTTCCGAGATTGTCCGGATGGCGTTAC
TGATTTCAGCGAAAATCCCTTCAAGTACGCCATGGAGCTCATTTACTTTG
CACAGGAGGAATGTGGTGAGCCGGTGCTGAAGGTGGCAGACGAACAATTT
AGTTTGAACATAGATTGGCAGACGTCCTATGCCATTACCAACCGGGAGTT
CATCTTCATGATAACCTACGCAGTTATTAGCGGAGTCTGGGTAGCCACTT
CGGTGTTGGTAATAACCACTTTGTGCAATCGCACCACCAAGCTGATCTCC
GGAGTGGTCTATTGGCCCTGGTTCCTATCCGTGCTAGCTGGCAGTATCCT
AGATGTGGTGGCCACGGTGTATCATGGAATCGACATAAGTCATACAACGT
CCATGAAAGATGCACTTGATTACATTGGAGTCTCATATAGCGAAATTGTT
AGTAATGTCTGGACTCTAATGGAGCCCTTCGGCGTATACTTCTCGACGCC
ATCGATTCTTCTACTGTGCCTCACAAGTCGCGTAGCCATCATCTGGCTGC
TGAACATCATTGGAGTTACCTTCTGTCTCTCGTTGTCCGGAATCATGGCG
GAGCAGAATGCGAAATCAGCCGCCTTGAGCAGGAGCCAGGCTCCCACCCG
ACAGCCGACACCACAGCCTGCGGTGGCATTAGTCCAGCCGGTGGTGGAGG
CCACGCTAGTGGAATCCATTCAGCCTTCGGCCCCGCAAGAGAGCCCTCAA
TATCCGGAGCAGATCCGACCCAAGCCGCTGCCCATTTTCATTCCCTCGGA
GCAGGGTGCCCAGCGTCCAAACTCCCAGCAGTTCGCACCCGGAGATCGCA
CCACTTTGCAATCGCCGGTGATGGTGCTACCACCACAAGTTCCTCAGCAG
AGAGATGTTGTGTCCCCGCAGCCTGACATCAACACCTATCGCACCACCGA
GGCTCATCCCGACCACCTCAACTATCCACCTTCGGAGCCACAAACTCCAC
GTGCTCCTTCGCCGGCTGTCCAACAACTGGCGGTGACGTCGCCACTAAAC
AATCGCTACAGCGAGATATATCCTGCTCCCGTAAATCCCCGCGTTAGCGA
AGAGCTGCGCAACCAGATGCCTTGGTCGTACACCAGCATGGTGACTAAGC
CACCACCGCCGCCACGCAAGCCACAACTTCAAGTACAGATCTACCCGCAG
ATTCCGGAACCCGACTACGCGGATCACGCAAGCTTTCTAGACCAT

BO11632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-RD 1314 CG1246-PD 1..1311 17..1327 6555 100 Plus
CG1246-RC 1314 CG1246-PC 1..1311 17..1327 6555 100 Plus
CG1246-RE 1314 CG1246-PE 1..1311 17..1327 6555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-RD 1840 CG1246-RD 409..1719 17..1327 6555 100 Plus
CG1246-RC 1674 CG1246-RC 243..1553 17..1327 6555 100 Plus
CG1246-RE 1527 CG1246-RE 96..1406 17..1327 6555 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2649256..2650084 499..1327 4145 100 Plus
3L 28110227 3L 2648856..2649017 204..365 810 100 Plus
3L 28110227 3L 2649072..2649205 366..499 670 100 Plus
3L 28110227 3L 2648664..2648787 80..203 620 100 Plus
3L 28110227 3L 2648532..2648596 17..81 325 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:39:37 has no hits.

BO11632.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:10 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
CG1246-RB 1..1314 17..1328 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:05:19 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
CG1246-RB 209..1526 9..1327 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:29:29 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
CG1246-RB 218..1528 17..1329 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:10 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
CG1246-RB 209..1526 9..1327 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:27:35 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
CG1246-RE 96..1406 17..1329 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:27:35 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2648856..2649017 204..365 100 -> Plus
3L 2649072..2649205 366..499 100 -> Plus
3L 2648664..2648787 80..203 100 -> Plus
3L 2648532..2648594 17..79 100 -> Plus
3L 2649257..2650084 500..1329 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:29:29 Download gff for BO11632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2648532..2648594 17..79 100 -> Plus
arm_3L 2648664..2648787 80..203 100 -> Plus
arm_3L 2648856..2649017 204..365 100 -> Plus
arm_3L 2649072..2649205 366..499 100 -> Plus
arm_3L 2649257..2650084 500..1329 99   Plus

BO11632.pep Sequence

Translation from 16 to 1345

> BO11632.pep
MAGMGTGFSKCFILFMAIVILVQGVAYLGLSIWGITFRDCPDGVTDFSEN
PFKYAMELIYFAQEECGEPVLKVADEQFSLNIDWQTSYAITNREFIFMIT
YAVISGVWVATSVLVITTLCNRTTKLISGVVYWPWFLSVLAGSILDVVAT
VYHGIDISHTTSMKDALDYIGVSYSEIVSNVWTLMEPFGVYFSTPSILLL
CLTSRVAIIWLLNIIGVTFCLSLSGIMAEQNAKSAALSRSQAPTRQPTPQ
PAVALVQPVVEATLVESIQPSAPQESPQYPEQIRPKPLPIFIPSEQGAQR
PNSQQFAPGDRTTLQSPVMVLPPQVPQQRDVVSPQPDINTYRTTEAHPDH
LNYPPSEPQTPRAPSPAVQQLAVTSPLNNRYSEIYPAPVNPRVSEELRNQ
MPWSYTSMVTKPPPPPRKPQLQVQIYPQIPEPDYADHASFLDH

BO11632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG1246-PD 437 CG1246-PD 1..437 1..437 2295 100 Plus
CG1246-PC 437 CG1246-PC 1..437 1..437 2295 100 Plus
CG1246-PE 437 CG1246-PE 1..437 1..437 2295 100 Plus
CG1246-PB 437 CG1246-PB 1..437 1..437 2295 100 Plus