Clone Sequence Records
BO11642.5prime Sequence
605 bp (604 high quality bases) assembled on 2006-04-19
> BO11642.5prime
GAAGTTATCAGTCGACATGCAGTTCCTCCGCGTGGGTGGTCGTATAACGG
CACTGCGTCAGAGATTGACCGATCGAATTCAGATGCCGGAGCGCTTCAAG
GGCACGTTCGTGGAGAAGTGGGTGCAGTATTGGAACGGCCTGGTCAGGGA
CTACACAGAGGTGGCAGTGGGTGTTGTGCGAGAATCCTACACGAAGCCGA
AAAAGGCGCTTCTCTATGGAACGGGAATGCTGTTCATGTACCAAGCCAAT
CTGAAGAATCCCGGCGAGGAGGCCTTTATGACTCTGCTAAGGGGTGCCAC
AAATCGAATGATCACAGTGCCGGTAGAACTTCAGAATCCCGTGTCCGCCG
ACTATCTGCTAACCTTGGAGAGGGCGATCAATCAAAAGAAACTGCGTCTC
CTTTCTCTCGGCATCTGCACGATCCTTTGGGTGGATCTATACGACGAGGA
CGACTGCACCTATCCGGCCATCTGTGAATATACCAACGTGGGCGTCTTCA
ACTTCCACGAACGGATCATCGATGTGGGATTTTGGAATCAATACTGGCGA
CTCAAATGGAAGATGCGCAACTATGATGTCAACTACCTGGCAAGCTTTCT
AGACC
BO11642.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-PA | 576 | CG14270-RA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-RA | 774 | CG14270-RA | 95..667 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3484712..3485284 | 589..17 | 2865 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:04:07 has no hits.
BO11642.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:22 Download gff for
BO11642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-PA | 1..576 | 17..592 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:38:21 Download gff for
BO11642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-PA | 1..576 | 17..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:50:16 Download gff for
BO11642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 89..667 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:55:27 Download gff for
BO11642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 89..667 | 9..589 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:55:27 Download gff for
BO11642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3484712..3485290 | 9..589 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:50:16 Download gff for
BO11642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3378745..3379323 | 9..589 | 99 | | Minus |
BO11642.3prime Sequence
605 bp (604 high quality bases) assembled on 2006-04-19
> BO11642.3prime
ATGGTCTAGAAAGCTTGCCAGGTAGTTGACATCATAGTTGCGCATCTTCC
ATTTGAGTCGCCAGTATTGATTCCAAAATCCCACATCGATGATCCGTTCG
TGGAAGTTGAAGACGCCCACGTTGGTATATTCACAGATGGCCGGATAGGT
GCAGTCGTCCTCGTCGTATAGATCCACCCAAAGGATCGTGCAGATGCCGA
GAGAAAGGAGACGCAGTTTCTTTTGATTGATCGCCCTCTCCAAGGTTAGC
AGATAGTCGGCGGACACGGGATTCTGAAGTTCTACCGGCACTGTGATCAT
TCGATTTGTGGCACCCCTTAGCAGAGTCATAAAGGCCTCCTCGCCGGGAT
TCTTCAGATTGGCTTGGTACATGAACAGCATTCCCGTTCCATAGAGAAGC
GCCTTTTTCGGCTTCGTGTAGGATTCTCGCACAACACCCACTGCCACCTC
TGTGTAGTCCCTGACCAGGCCGTTCCAATACTGCACCCACTTCTCCACGA
ACGTGCCCTTGAAGCGCTCCGGCATCTGAATTCGATCGGTCAATCTCTGA
CGCAGTGCCGTTATACGACCACCCACGCGGAGGAACTGCATGTCGACTGA
TAACT
BO11642.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-PA | 576 | CG14270-RA | 1..573 | 591..19 | 2865 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 03:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-RA | 774 | CG14270-RA | 95..667 | 591..19 | 2865 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 03:47:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3484712..3485284 | 19..591 | 2865 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 03:47:04 has no hits.
BO11642.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:21 Download gff for
BO11642.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-PA | 1..576 | 16..591 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:38:20 Download gff for
BO11642.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-PA | 1..576 | 16..591 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:58:14 Download gff for
BO11642.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 89..667 | 19..599 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:29:02 Download gff for
BO11642.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 89..667 | 19..599 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:29:02 Download gff for
BO11642.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3484712..3485290 | 19..599 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:58:14 Download gff for
BO11642.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3378745..3379323 | 19..599 | 99 | | Plus |
BO11642.complete Sequence
607 bp assembled on 2006-10-11
GenBank Submission: FJ632140
> BO11642.complete
GAAGTTATCAGTCGACATGCAGTTCCTCCGCGTGGGTGGTCGTATAACGG
CACTGCGTCAGAGATTGACCGATCGAATTCAGATGCCGGAGCGCTTCAAG
GGCACGTTCGTGGAGAAGTGGGTGCAGTATTGGAACGGCCTGGTCAGGGA
CTACACAGAGGTGGCAGTGGGTGTTGTGCGAGAATCCTACACGAAGCCGA
AAAAGGCGCTTCTCTATGGAACGGGAATGCTGTTCATGTACCAAGCCAAT
CTGAAGAATCCCGGCGAGGAGGCCTTTATGACTCTGCTAAGGGGTGCCAC
AAATCGAATGATCACAGTGCCGGTAGAACTTCAGAATCCCGTGTCCGCCG
ACTATCTGCTAACCTTGGAGAGGGCGATCAATCAAAAGAAACTGCGTCTC
CTTTCTCTCGGCATCTGCACGATCCTTTGGGTGGATCTATACGACGAGGA
CGACTGCACCTATCCGGCCATCTGTGAATATACCAACGTGGGCGTCTTCA
ACTTCCACGAACGGATCATCGATGTGGGATTTTGGAATCAATACTGGCGA
CTCAAATGGAAGATGCGCAACTATGATGTCAACTACCTGGCAAGCTTTCT
AGACCAT
BO11642.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-RA | 576 | CG14270-PA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-RA | 774 | CG14270-RA | 95..667 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3484712..3485284 | 589..17 | 2865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:07:16 has no hits.
BO11642.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:15 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 1..576 | 17..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:05:24 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 85..663 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:58 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 95..667 | 17..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:15 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 85..663 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:15 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 95..667 | 17..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:15 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3484709..3485284 | 17..591 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:58 Download gff for
BO11642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3378742..3379317 | 17..591 | 99 | | Minus |
BO11642.pep Sequence
Translation from 16 to 607
> BO11642.pep
MQFLRVGGRITALRQRLTDRIQMPERFKGTFVEKWVQYWNGLVRDYTEVA
VGVVRESYTKPKKALLYGTGMLFMYQANLKNPGEEAFMTLLRGATNRMIT
VPVELQNPVSADYLLTLERAINQKKLRLLSLGICTILWVDLYDEDDCTYP
AICEYTNVGVFNFHERIIDVGFWNQYWRLKWKMRNYDVNYLASFLDH
BO11642.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-PA | 191 | CG14270-PA | 1..191 | 1..191 | 1023 | 100 | Plus |
