Clone Sequence Records
BO11644.3prime Sequence
815 bp (783 high quality bases) assembled on 2006-04-19
> BO11644.3prime
ATGGTCTAGAAAGCTTGGCACAATAAATAAAAATATAAAATTCGCAATAT
ATTAAAGTTAATGAACTTACCGCTCCCGCAGAATCGTAGTACACACGATT
CGGAACAGGTCGCCTTACTGGCGGAGGTGCCGCATAGTTGGGATCCACTT
CAGGATCGCTCTGCGCATCTCCAGCAGGACGAACTGGATCTCTTAGAGGA
TCTCTGACTGGAACACCAGGCACCACGGCCGAGTTAAGAATTCCTGGAGC
AAAGAGCGATAGCCAGGTGGCAAATGGTGCGTACGGACGCACTGGCACTG
GAATGGGTTGTACAGGTGGAAGAGGATCAGACAGAAGACCTCCACCCAAA
CCACCTCCTCCATAGCCGCGACATCCACCGGGATATACTTTCACCACATT
CACGTCGAACAGAAAGCGACCCTGTTCAGCGGGATCCTTCTGATTCTGAC
CACCTCGAGCATCGCGACCAAACGGGGAGCAGGGACCACCGCCGTATCCT
CCATATCCGCCATATCCACCATATCCGCCATATCCACCATATCCTCCTAG
GTAGGGCCTGGCCAACCTCTTGAGCTTCTTTTTAAGCAGCAGTGTGCGTT
CGTCACCGGTTTCATCCAATTCCTGATTGGAAGCACCAGCAAACTTGGCA
TTCTCCTTGTCCGATTTGCTGGTGGTACTTTCTTCCCTAGCCTTCCGACC
GGCCAAAGAGCTATACGAATTCCCGGAATACGATGTGGAGTAGGCCCTTC
GGCGGGGATACTCGTAACTATAGGTGCGCGGATAGGCCAACAAATAACCC
AAGGCTCCCAAAAGG
BO11644.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-PA | 906 | CG14329-RA | 26..765 | 810..71 | 3650 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 03:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-RA | 1103 | CG14329-RA | 85..829 | 815..71 | 3680 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 03:40:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17609443..17610238 | 815..20 | 3935 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-09 03:41:01 has no hits.
BO11644.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:25 Download gff for
BO11644.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-PA | 21..819 | 15..815 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:38:25 Download gff for
BO11644.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-PA | 21..765 | 71..815 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:57:24 Download gff for
BO11644.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 85..829 | 71..815 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:28:26 Download gff for
BO11644.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 85..829 | 71..815 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:28:26 Download gff for
BO11644.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17609443..17610241 | 15..815 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:57:24 Download gff for
BO11644.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13435165..13435963 | 15..815 | 99 | | Minus |
BO11644.5prime Sequence
666 bp (654 high quality bases) assembled on 2006-04-19
> BO11644.5prime
GAAGTTATCAGTCGACATGAAACTGTTTCTTCTACTCCTTCTGGGAGCCT
TGGGCTATTCGTTGGCCTATCCGCGCACCTATAGTTACGAGTATCCCCGC
CGAAGGGCCTACTCCACATCGTATTCCGGGAATTCGTATAGCTCTTTGGC
CGGTCGGAAGGCTAGGGAAGAAAGTACCACCAGCAAATCGGACAAGGAGA
ATGCCAAGTTTGCTGGTGCTTCCAATCAGGAATTGGATGAAACCGGTGAC
GAACGCACACTGCTGCTTAAAAAGAAGCTCAAGAGGTTGGCCAGGCCCTA
CCTAGGAGGATATGGTGGATATGGCGGATATGGTGGATATGGCGGATATG
GAGGATACGGCGGTGGTCCCTGCTCCCCGTTTGGTCGCGATGCTCGAGGT
GGTCAGAATCAGAAGGATCCCGCTGAACAGGGTCGCTTTCTGTTCGACGT
GAATGTGGTGAAAGTATATCCCGGTGGATGTCGCGGCTATGGAGGAGGTG
GTTTGGGTGGAGGTCTTCTGTCTGATCCTCTTCCACCTGTACAACCCATT
CCAGTGCCAGTGCGTCCGTACGCACCATTTGCCACCTGGCTATCGCTCTT
TGCTCCAGGAATTCTTAACTCGGCCGTGGTGCCTGGTGTTCCAGTCAGAG
ATCCTCTAAGAGATCC
BO11644.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-PA | 906 | CG14329-RA | 1..650 | 17..666 | 3250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:18:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-RA | 1103 | CG14329-RA | 65..714 | 17..666 | 3250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:18:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17609423..17610072 | 17..666 | 3250 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:18:53 has no hits.
BO11644.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:26 Download gff for
BO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-PA | 1..650 | 17..666 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:38:27 Download gff for
BO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-PA | 1..650 | 17..666 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:38:18 Download gff for
BO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 60..714 | 12..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:09:30 Download gff for
BO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 60..714 | 12..666 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:30 Download gff for
BO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17609418..17610072 | 12..666 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:38:18 Download gff for
BO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13435140..13435794 | 12..666 | 99 | | Plus |
BO11644.complete Sequence
851 bp assembled on 2011-06-28
> BO11644.complete
GAAGTTATCAGTCGACATGAAACTGTTTCTTCTACTCCTTCTGGGAGCCT
TGGGCTATTCGTTGGCCTATCCGCGCACCTATAGTTACGAGTATCCCCGC
CGAAGGGCCTACTCCACATCGTATTCCGGGAATTCGTATAGCTCTTTGGC
CGGTCGGAAGGCTAGGGAAGAAAGTACCACCAGCAAATCGGACAAGGAGA
ATGCCAAGTTTGCTGGTGCTTCCAATCAGGAATTGGATGAAACCGGTGAC
GAACGCACACTGCTGCTTAAAAAGAAGCTCAAGAGGTTGGCCAGGCCCTA
CCTAGGAGGATATGGTGGATATGGCGGATATGGTGGATATGGCGGATATG
GAGGATACGGCGGTGGTCCCTGCTCCCCGTTTGGTCGCGATGCTCGAGGT
GGTCAGAATCAGAAGGATCCCGCTGAACAGGGTCGCTTTCTGTTCGACGT
GAATGTGGTGAAAGTATATCCCGGTGGATGTCGCGGCTATGGAGGAGGTG
GTTTGGGTGGAGGTCTTCTGTCTGATCCTCTTCCACCTGTACAACCCATT
CCAGTGCCAGTGCGTCCGTACGCACCATTTGCCACCTGGCTATCGCTCTT
TGCTCCAGGAATTCTTAACTCGGCCGTGGTGCCTGGTGTTCCAGTCAGAG
ATCCTCTAAGAGATCCAGTTCGTCCTGCTGGAGATGCGCAGAGCGATCCT
GAAGTGGATCCCAACTATGCGGCACCTCCGCCAGTAAGGCGACCTGTTCC
GAATCGTGTGTACTACGATTCTGCGGGAGCGGTAAGTTCATTAACTTTAA
TATATTGCGAATTTTATATTTTTATTTATTGTGCCAAGCTTTCTAGACCA
T
BO11644.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-RA | 906 | CG14329-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-RA | 1103 | CG14329-RA | 65..829 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17609423..17610238 | 17..832 | 4080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:58:20 has no hits.
BO11644.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 11:52:34 Download gff for
BO11644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 62..826 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:02 Download gff for
BO11644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 65..829 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:13 Download gff for
BO11644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 65..829 | 17..781 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:13 Download gff for
BO11644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17609423..17610238 | 17..835 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:02 Download gff for
BO11644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13435145..13435960 | 17..835 | 99 | | Plus |
BO11644.pep Sequence
Translation from 16 to 850
> BO11644.pep
MKLFLLLLLGALGYSLAYPRTYSYEYPRRRAYSTSYSGNSYSSLAGRKAR
EESTTSKSDKENAKFAGASNQELDETGDERTLLLKKKLKRLARPYLGGYG
GYGGYGGYGGYGGYGGGPCSPFGRDARGGQNQKDPAEQGRFLFDVNVVKV
YPGGCRGYGGGGLGGGLLSDPLPPVQPIPVPVRPYAPFATWLSLFAPGIL
NSAVVPGVPVRDPLRDPVRPAGDAQSDPEVDPNYAAPPPVRRPVPNRVYY
DSAGAVSSLTLIYCEFYIFIYCAKLSRP
BO11644.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-PA | 301 | CG14329-PA | 1..255 | 1..255 | 1372 | 100 | Plus |
