Clone BO11650 Report

Search the DGRC for BO11650

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:116
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG15739-RA
Protein status:BO11650.pep: validated full length
Sequenced Size:958

Clone Sequence Records

BO11650.3prime Sequence

884 bp (813 high quality bases) assembled on 2006-04-19

> BO11650.3prime
ATGGTCTAGAAAGCTTGCGACACGCGACTTGGGCGCCTCGCCCAGCATCT
GGGCCACATCGGCCACGCTGTCCGCATAGTAGTCCGGTATGCGCTGCGGA
TCCGTCTCGGCCAGGAGCTCCTCCTTGCTGCATCCGCCGCTGAGCACGAG
CAGCGTTTGGAATCCGCACTGGCGTCCAAAGCTAACGTCCTGGGCCAACA
TATCTCCGATCATGAGCACCCGACTGGGCTGAACGATTTGGTAATGCTCG
ACAAGCAGATCACCCAACTCGCGGCCAGGCTTGCCCAACGTAATCGGCTG
CTTGCCACTGGCCTCCACGAGGATGGAGGCGAAGGCTCCCGGACCTACGA
TGTTCACTTCCTTGGCCACCGGTAGCAGGCGATCGGTGGCGCCTTCAATG
AGCATACACTCCGGATGGCGCAGGTACAGGTGGGCGCGCAGAATCTTCGG
GGAAGTCAGATTGAAGTCCACGTCGATGATGACGGCGCGCACGGGCTCCT
TGCCAAAGATGTGCTCGGCCAGGCTGGCGTAGCTCTCCTCGATGAACTCG
TTGGGCCCGTCCAGGAGCTGGAATCCCGCCTCGCGCAACACCGTCTTGAA
CGACTGGCTGGCGATGATGTAGATGAGTCCCTCGAACTTGATGCTCTGCA
GATAGCTAACGATGGACTTGGCCGGATGCCAAATCTGCTCCGGGTGCACC
TGCATCCCGATCTTGGCGAAGAGTTTGACGCACTGCTCGGACGTGCGAAC
GCTGTTGTTGGTCAGGAAGGTCAGATGCTTGCCCATCTGCTCGAGAGCGG
CATATCCGTCGGCGGCACGCGGAATGCTCTGCTCAAAGGTCCACAGGACG
CCATCGATGTCGCTGAACACCCGGTCGAAAGAGT

BO11650.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-PA 927 CG15739-RA 59..924 884..19 4305 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 17:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-RB 1407 CG15739-RB 119..984 884..19 4315 99.9 Minus
CG15739-RA 1529 CG15739-RA 241..1106 884..19 4315 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 17:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11874386..11874923 556..19 2690 100 Minus
X 23542271 X 11873937..11874265 884..556 1630 99.7 Minus
Blast to na_te.dros performed on 2015-02-03 17:31:16 has no hits.

BO11650.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:34 Download gff for BO11650.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-PA 59..927 18..884 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:38:40 Download gff for BO11650.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-PA 59..927 18..884 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:35:42 Download gff for BO11650.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 241..1106 19..884 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 19:02:26 Download gff for BO11650.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 241..1106 19..884 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 19:02:26 Download gff for BO11650.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11873937..11874265 556..884 99 -> Minus
X 11874387..11874923 19..555 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:35:42 Download gff for BO11650.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11767970..11768298 556..884 99 -> Minus
arm_X 11768420..11768956 19..555 100   Minus

BO11650.5prime Sequence

857 bp (848 high quality bases) assembled on 2006-04-19

> BO11650.5prime
GAAGTTATCAGTCGACATGGCCAAACCCCAGCACATTTTGCAGCTAAGCC
AGGAGCAGCGGAGCAGCGTTGTCGACTCTTTCGACCGGGTGGTCAGCGAC
ATCGATGGCGTCCTGTGGACCTTTGAGCAGAGCATTCCGCGTGCCGCCGA
CGGATATGCCGCTCTCGAGCAGATGGGCAAGCATCTGACCTTCCTGACCA
ACAACAGCGTTCGCACGTCCGAGCAGTGCGTCAAACTCTTCGCCAAGATC
GGGATGCAGGTGCACCCGGAGCAGATTTGGCATCCGGCCAAGTCCATCGT
TAGCTATCTGCAGAGCATCAAGTTCGAGGGACTCATCTACATCATCGCCA
GCCAGTCGTTCAAGACGGTGTTGCGCGAGGCGGGATTCCAGCTCCTGGAC
GGGCCCAACGAGTTCATCGAGGAGAGCTACGCCAGCCTGGCCGAGCACAT
CTTTGGCAAGGAGCCCGTGCGCGCCGTCATCATCGACGTGGACTTCAATC
TGACTTCCCCGAAGATTCTGCGCGCCCACCTGTACCTGCGCCATCCGGAG
TGTATGCTCATTGAAGGCGCCACCGATCGCCTGCTACCGGTGGCCAAGGA
AGTGAACATCGTAGGTCCGGGAGCCTTCGCCTCCATCCTCGTGGAGGCCA
GTGGCAAGCAGCCGATTACGTTGGGCAAGCCTGGCCGCGAGTTGGGTGAT
CTGCTTGTCGAGCATTACCAAATCGTTCAGCCCAGTCGGGTGCTCATGAT
CGGAGATATGTTGGCCCAGGACGTTAGCTTTGGACGCCAGTGCGGATTCC
AAACGCTGCTCGTGCTCAGCGGCGGATGCAGCAAGGAGGAGCTCCTGGCC
GAGACGG

BO11650.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-PA 927 CG15739-RA 1..841 17..857 4205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-RB 1407 CG15739-RB 61..901 17..857 4205 100 Plus
CG15739-RA 1529 CG15739-RA 183..1023 17..857 4205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:02:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11874386..11874840 403..857 2275 100 Plus
X 23542271 X 11873881..11874265 19..403 1925 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:02:18 has no hits.

BO11650.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:12:35 Download gff for BO11650.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:38:41 Download gff for BO11650.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:49:57 Download gff for BO11650.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 183..1023 17..857 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:55:07 Download gff for BO11650.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 183..1023 17..857 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:55:07 Download gff for BO11650.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11873881..11874265 19..403 100 -> Plus
X 11874387..11874840 404..857 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:49:57 Download gff for BO11650.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11767914..11768298 19..403 100 -> Plus
arm_X 11768420..11768873 404..857 100   Plus

BO11650.complete Sequence

958 bp assembled on 2006-10-11

GenBank Submission: FJ632144

> BO11650.complete
GAAGTTATCAGTCGACATGGCCAAACCCCAGCACATTTTGCAGCTAAGCC
AGGAGCAGCGGAGCAGCGTTGTCGACTCTTTCGACCGGGTGGTCAGCGAC
ATCGATGGCGTCCTGTGGACCTTTGAGCAGAGCATTCCGCGTGCCGCCGA
CGGATATGCCGCTCTCGAGCAGATGGGCAAGCATCTGACCTTCCTGACCA
ACAACAGCGTTCGCACGTCCGAGCAGTGCGTCAAACTCTTCGCCAAGATC
GGGATGCAGGTGCACCCGGAGCAGATTTGGCATCCGGCCAAGTCCATCGT
TAGCTATCTGCAGAGCATCAAGTTCGAGGGACTCATCTACATCATCGCCA
GCCAGTCGTTCAAGACGGTGTTGCGCGAGGCGGGATTCCAGCTCCTGGAC
GGGCCCAACGAGTTCATCGAGGAGAGCTACGCCAGCCTGGCCGAGCACAT
CTTTGGCAAGGAGCCCGTGCGCGCCGTCATCATCGACGTGGACTTCAATC
TGACTTCCCCGAAGATTCTGCGCGCCCACCTGTACCTGCGCCATCCGGAG
TGTATGCTCATTGAAGGCGCCACCGATCGCCTGCTACCGGTGGCCAAGGA
AGTGAACATCGTAGGTCCGGGAGCCTTCGCCTCCATCCTCGTGGAGGCCA
GTGGCAAGCAGCCGATTACGTTGGGCAAGCCTGGCCGCGAGTTGGGTGAT
CTGCTTGTCGAGCATTACCAAATCGTTCAGCCCAGTCGGGTGCTCATGAT
CGGAGATATGTTGGCCCAGGACGTTAGCTTTGGACGCCAGTGCGGATTCC
AAACGCTGCTCGTGCTCAGCGGCGGATGCAGCAAGGAGGAGCTCCTGGCC
GAGACGGATCCGCAGCGCATACCGGACTACTATGCGGACAGCGTGGCCGA
TGTGGCCCAGATGCTGGGCGAGGCGCCCAAGTCGCGTGTCGCAAGCTTTC
TAGACCAT

BO11650.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-RB 927 CG15739-PB 1..924 17..940 4620 100 Plus
CG15739-RA 927 CG15739-PA 1..924 17..940 4620 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-RB 1407 CG15739-RB 61..984 17..940 4620 100 Plus
CG15739-RA 1529 CG15739-RA 183..1106 17..940 4620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11874386..11874923 403..940 2690 100 Plus
X 23542271 X 11873881..11874265 19..403 1925 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:56:53 has no hits.

BO11650.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:08 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 1..927 17..941 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:05:16 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 59..982 17..940 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:29:29 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 183..1106 17..942 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:08 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 59..982 17..940 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:45 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
CG15739-RA 183..1106 17..942 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:45 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
X 11873880..11874265 17..403 99 -> Plus
X 11874387..11874923 404..942 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:29:29 Download gff for BO11650.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11767913..11768298 17..403 99 -> Plus
arm_X 11768420..11768956 404..942 99   Plus

BO11650.pep Sequence

Translation from 16 to 958

> BO11650.pep
MAKPQHILQLSQEQRSSVVDSFDRVVSDIDGVLWTFEQSIPRAADGYAAL
EQMGKHLTFLTNNSVRTSEQCVKLFAKIGMQVHPEQIWHPAKSIVSYLQS
IKFEGLIYIIASQSFKTVLREAGFQLLDGPNEFIEESYASLAEHIFGKEP
VRAVIIDVDFNLTSPKILRAHLYLRHPECMLIEGATDRLLPVAKEVNIVG
PGAFASILVEASGKQPITLGKPGRELGDLLVEHYQIVQPSRVLMIGDMLA
QDVSFGRQCGFQTLLVLSGGCSKEELLAETDPQRIPDYYADSVADVAQML
GEAPKSRVASFLDH

BO11650.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15739-PB 308 CG15739-PB 1..308 1..308 1567 100 Plus
CG15739-PA 308 CG15739-PA 1..308 1..308 1567 100 Plus
CG10352-PB 315 CG10352-PB 1..299 1..297 641 44 Plus
CG2680-PB 305 CG2680-PB 1..305 1..305 491 37.7 Plus
CG5567-PA 330 CG5567-PA 23..318 6..296 378 30.9 Plus