Clone Sequence Records
BO11668.3prime Sequence
653 bp (652 high quality bases) assembled on 2006-04-19
> BO11668.3prime
ATGGTCTAGAAAGCTTGCTGAGCGCGGCGTGCTCTCCAAGTCCTTGATCT
GGCGCAGGATCTCTGACTTCTTTTTCACCTTGTCCAGCTGGTCCTTGTCC
AGCTTCTTCTGCTCGCCGGCCTGGATCCTGCTCTCGATCTGTTCGATTTC
CCGGATTTTCTTGCGCAGCTTCTTCAACTGCTTGGCAGGGTCCACCACCT
CCTGGGCGGCGTCCAGTTTCAGGGTGTCCTCCAGTGTCTTGGATATCGAG
TTGATGTCCCGGCTGCCAGAGGGCTGCTGTTGCTGCTGCTGCTGCTGCTG
ACTGACTTTGGGTGGCGGACACGTGCTGGGCGGCATAACCAGGACGCCGG
GCGCCGGCGCCTTTGGCTGCCTGCCGGATTCCTTCTCCTGCTTCTTGGCC
CTGGTGCGCTCCTGCTTCTCGCGCTCCTTCTTGGACTCGGCGGCCAGCAG
GGGACACATGCCAGGCGGCACTCCGGCCTGGCGCTGCGCCACGAACTGCT
TGCCCTTGCTCTCGTAGAGTGGCACCTCCTCCTGCGGCACGTAGCCGTCC
TTGACGCGCCGCGCCTTGCGCCAGGTGCCATCCGGCCGCTTGGTGGCCGG
AATGAACTTGCCCTCGCTGCTCTGTAGGTACGTGCTCATGTCGACTGATA
ACT
BO11668.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30176-PA | 624 | wibg-RA | 1..621 | 639..19 | 3105 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:22:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 983 | CG30176-RA | 55..675 | 639..19 | 3105 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:21:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23856262..23856882 | 19..639 | 3105 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:21:57 has no hits.
BO11668.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:13:09 Download gff for
BO11668.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-PA | 1..624 | 18..639 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:39:26 Download gff for
BO11668.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30176-PA | 1..624 | 18..639 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:56:00 Download gff for
BO11668.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 48..679 | 13..647 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:01:07 Download gff for
BO11668.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pym-RA | 48..679 | 13..647 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:07 Download gff for
BO11668.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23856258..23856889 | 13..647 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:56:00 Download gff for
BO11668.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19743781..19744412 | 13..647 | 99 | | Plus |
BO11668.5prime Sequence
653 bp (652 high quality bases) assembled on 2006-04-19
> BO11668.5prime
GAAGTTATCAGTCGACATGAGCACGTACCTACAGAGCAGCGAGGGCAAGT
TCATTCCGGCCACCAAGCGGCCGGATGGCACCTGGCGCAAGGCGCGGCGC
GTCAAGGACGGCTACGTGCCGCAGGAGGAGGTGCCACTCTACGAGAGCAA
GGGCAAGCAGTTCGTGGCGCAGCGCCAGGCCGGAGTGCCGCCTGGCATGT
GTCCCCTGCTGGCCGCCGAGTCCAAGAAGGAGCGCGAGAAGCAGGAGCGC
ACCAGGGCCAAGAAGCAGGAGAAGGAATCCGGCAGGCAGCCAAAGGCGCC
GGCGCCCGGCGTCCTGGTTATGCCGCCCAGCACGTGTCCGCCACCCAAAG
TCAGTCAGCAGCAGCAGCAGCAGCAACAGCAGCCCTCTGGCAGCCGGGAC
ATCAACTCGATATCCAAGACACTGGAGGACACCCTGAAACTGGACGCCGC
CCAGGAGGTGGTGGACCCTGCCAAGCAGTTGAAGAAGCTGCGCAAGAAAA
TCCGGGAAATCGAACAGATCGAGAGCAGGATCCAGGCCGGCGAGCAGAAG
AAGCTGGACAAGGACCAGCTGGACAAGGTGAAAAAGAAGTCAGAGATCCT
GCGCCAGATCAAGGACTTGGAGAGCACGCCGCGCTCAGCAAGCTTTCTAG
ACC
BO11668.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30176-PA | 624 | wibg-RA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:34:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 983 | CG30176-RA | 55..675 | 17..637 | 3105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:34:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23856262..23856882 | 637..17 | 3105 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:34:35 has no hits.
BO11668.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:13:10 Download gff for
BO11668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-PA | 1..624 | 17..638 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:39:27 Download gff for
BO11668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30176-PA | 1..624 | 17..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:45:06 Download gff for
BO11668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 48..679 | 9..643 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:19:13 Download gff for
BO11668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pym-RA | 48..679 | 9..643 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:19:13 Download gff for
BO11668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23856258..23856889 | 9..643 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:45:06 Download gff for
BO11668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19743781..19744412 | 9..643 | 99 | | Minus |
BO11668.complete Sequence
655 bp assembled on 2007-06-22
GenBank Submission: FJ632149
> BO11668.complete
GAAGTTATCAGTCGACATGAGCACGTACCTACAGAGCAGCGAGGGCAAGT
TCATTCCGGCCACCAAGCGGCCGGATGGCACCTGGCGCAAGGCGCGGCGC
GTCAAGGACGGCTACGTGCCGCAGGAGGAGGTGCCACTCTACGAGAGCAA
GGGCAAGCAGTTCGTGGCGCAGCGCCAGGCCGGAGTGCCGCCTGGCATGT
GTCCCCTGCTGGCCGCCGAGTCCAAGAAGGAGCGCGAGAAGCAGGAGCGC
ACCAGGGCCAAGAAGCAGGAGAAGGAATCCGGCAGGCAGCCAAAGGCGCC
GGCGCCCGGCGTCCTGGTTATGCCGCCCAGCACGTGTCCGCCACCCAAAG
TCAGTCAGCAGCAGCAGCAGCAGCAACAGCAGCCCTCTGGCAGCCGGGAC
ATCAACTCGATATCCAAGACACTGGAGGACACCCTGAAACTGGACGCCGC
CCAGGAGGTGGTGGACCCTGCCAAGCAGTTGAAGAAGCTGCGCAAGAAAA
TCCGGGAAATCGAACAGATCGAGAGCAGGATCCAGGCCGGCGAGCAGAAG
AAGCTGGACAAGGACCAGCTGGACAAGGTGAAAAAGAAGTCAGAGATCCT
GCGCCAGATCAAGGACTTGGAGAGCACGCCGCGCTCAGCAAGCTTTCTAG
ACCAT
BO11668.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:57:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 624 | CG30176-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 983 | CG30176-RA | 55..675 | 17..637 | 3105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23856262..23856882 | 637..17 | 3105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:57:40 has no hits.
BO11668.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:08:40 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 1..624 | 17..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:25:25 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 46..677 | 9..643 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:27:54 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 55..675 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:08:40 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 46..677 | 9..643 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:11 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pym-RA | 55..675 | 17..639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:11 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23856258..23856882 | 17..639 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:27:54 Download gff for
BO11668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19743781..19744405 | 17..639 | 99 | | Minus |
BO11668.pep Sequence
Translation from 16 to 655
> BO11668.pep
MSTYLQSSEGKFIPATKRPDGTWRKARRVKDGYVPQEEVPLYESKGKQFV
AQRQAGVPPGMCPLLAAESKKEREKQERTRAKKQEKESGRQPKAPAPGVL
VMPPSTCPPPKVSQQQQQQQQQPSGSRDINSISKTLEDTLKLDAAQEVVD
PAKQLKKLRKKIREIEQIESRIQAGEQKKLDKDQLDKVKKKSEILRQIKD
LESTPRSASFLDH
BO11668.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-PA | 207 | CG30176-PA | 1..207 | 1..207 | 1051 | 100 | Plus |
