Clone Sequence Records
BO11675.3prime Sequence
841 bp (802 high quality bases) assembled on 2006-04-19
> BO11675.3prime
ATGGTCTAGAAAGCTTGCCATCGCCACGGTGGCCAGGACAACGGTGATGT
CGTCCGGCTTGCCGCCACGCGCCTGAATGTTATTCCTCCTGGCGCTGAGG
GCGAAGGGCGAGAGGAACTCGCTGTTGAGGGACAGGGTGCGCGCCATCAG
CGCCAGGCTGTTGGCCGTCATCTGGAGCTTGACGGGATCGCGTTCGCCCT
CCACCTCGCTAAGCACCTGCAGCATTAGATCCTCGGGCACGTTGTCGAAC
ACTCCGTCGGTTGCAATGAGAATCACGTCGCCATCCCGCACCGGAAAGCT
CATCGTGTCCGCCGACTCAGGGCTGTCGCTGAGGACATTGGGCCCATGTC
CCGGCGGCGGCAATGACAGTTGGAAGGGTGTGTTAAAATAGTGCTGCTGC
TCCTCGGACTTGTGAACCACCTGGCCTTCGCGCACCACAACGAAGCCGCT
GTCGCCGATGTTGGCCGTGTGCACGGTGCTCGTCTCACGGTTGAGGATCA
GGACGCAGGCGGTGCTGCTGCCCAGTATGGGCTTCTTCTGCTCCATCAGC
TCGCAGTAGCTGTAGGCCAGCAGGTTGACTGGTCGTTGGGGATTAAAGTG
GCTGCACTGCACCAACCGCTCACAGGTGCGCATCAGGAACGATGAAAACT
CTCCGGGATCGATGCCATAGCTTCGCCAGCCGCCCACGCCGTCGGCCACG
CCCATGACATCGGCACTGGCGGTGGAGGCCTTGAACCATGAGTCCTCGCC
GTACTTTCCCGGCTTGTACTTGTGTCGCAGGTTGTCCTTGGCGAAGCCGC
ACACCACCGACACGAAACGGGGTCGTGAGGCGCCCGAGGAT
BO11675.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:28:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-PA | 966 | CG12091-RA | 141..963 | 841..19 | 4090 | 99.8 | Minus |
CG7615-PA | 945 | fig-RA | 247..278 | 705..674 | 135 | 96.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:27:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-RB | 1907 | CG12091-RB | 415..1237 | 841..19 | 4100 | 99.9 | Minus |
CG12091-RA | 1824 | CG12091-RA | 415..1237 | 841..19 | 4100 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 11:27:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1535599..1536421 | 19..841 | 4100 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-01 11:27:36 has no hits.
BO11675.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:13:23 Download gff for
BO11675.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-PA | 141..966 | 16..841 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:39:44 Download gff for
BO11675.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-PA | 141..966 | 16..841 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:37:57 Download gff for
BO11675.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 415..1237 | 19..841 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:12:23 Download gff for
BO11675.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 415..1237 | 19..841 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:12:23 Download gff for
BO11675.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1535599..1536421 | 19..841 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:37:57 Download gff for
BO11675.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1535599..1536421 | 19..841 | 99 | | Plus |
BO11675.5prime Sequence
889 bp (785 high quality bases) assembled on 2006-04-19
> BO11675.5prime
GAAGTTATCAGTCGACATGCACTCGTCACTCAGCTGGACCTCGCGTGCGA
TCTCTCGCGCCCTGCGCAGCAGCTTCTCCACGCTCCTGGAAACGGCCACG
GGTGGCGGAAGTGGGGCAGCAGCCAAGGGGGCCACCAAGTCGGGAGCGAC
ACCAGGATCCTCGGGCGCCCCACGACCCCGTTTCGTGTCGGTGGTGTGCG
GCTTCGCCAAGGACAACCTGCGACACAAGTACAAGCCGGGAAAGTACGGC
GAGGACTCATGGTTCAAGGCCTCCACCGCCAGTGCCGATGTCATGGGCGT
GGCCGACGGCGTGGGCGGCTGGCGAAGCTATGGCATCGATCCCGGAGAGT
TTTCATCGTTCCTGATGCGCACCTGTGAGCGGTTGGTGCAGTGCAGCCAC
TTTAATCCCCAACGACCAGTCAACCTGCTGGCCTACAGCTACTGCGAGCT
GATGGAGCAGAAGAAGCCCATACTGGGCAGCAGCACCGCCTGCGTCCTGA
TCCTCAACCGTGAGACGAGCACCGTGCACACGGCCAACATCGGCGACAGC
GGCTTCGTTGTGGTGCGCGAAGGCCAGGTGGTTCACAAGTCCGAGGAGCA
GCAGCACTATTTTAACACACCCTTCCAACTGTCATTGCCGCCGCCGGGAC
ATGGGCCCAATGTCCTCAGCGACAGCCCTGAGTCGGCGGACACGATGAGC
TTTCCGGTGCGGGATGGCGACGTGATTCTCATTGCAACCGACGGAGTGTT
CGACAACGTGCCCGAGGATCTAATGCTGCAGGTGCTTAACGAGGTGGAGG
GCGAACGCGATCCCGTCAAGCTCCCGATGACGGCCAACAGCCTGGCGCTG
ATGGCGCGCACCCTGTCCCTCAACAGCGAGTTCCTCTCG
BO11675.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:28:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-PA | 966 | CG12091-RA | 1..873 | 17..889 | 4315 | 99.7 | Plus |
CG7615-PA | 945 | fig-RA | 247..278 | 293..324 | 135 | 96.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-RB | 1907 | CG12091-RB | 275..1147 | 17..889 | 4335 | 99.8 | Plus |
CG12091-RA | 1824 | CG12091-RA | 275..1147 | 17..889 | 4335 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1535689..1536561 | 889..17 | 4335 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:00:56 has no hits.
BO11675.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:13:24 Download gff for
BO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-PA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:39:46 Download gff for
BO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-PA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 11:52:46 Download gff for
BO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 273..1147 | 13..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:30:00 Download gff for
BO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 273..1147 | 13..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:30:00 Download gff for
BO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1535689..1536563 | 13..889 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 11:52:46 Download gff for
BO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1535689..1536563 | 13..889 | 99 | | Minus |
BO11675.complete Sequence
997 bp assembled on 2006-10-11
GenBank Submission: FJ632151
> BO11675.complete
GAAGTTATCAGTCGACATGCACTCGTCACTCAGCTGGACCTCGCGTGCGA
TCTCTCGCGCCCTGCGCAGCAGCTTCTCCACGCTCCTGGAAACGGCCACG
GGTGGCGGAAGTGGGGCAGCAGCCAAGGGGGCCACCAAGTCGGGAGCGAC
ACCAGGATCCTCGGGCGCCCCACGACCCCGTTTCGTGTCGGTGGTGTGCG
GCTTCGCCAAGGACAACCTGCGACACAAGTACAAGCCGGGAAAGTACGGC
GAGGACTCATGGTTCAAGGCCTCCACCGCCAGTGCCGATGTCATGGGCGT
GGCCGACGGCGTGGGCGGCTGGCGAAGCTATGGCATCGATCCCGGAGAGT
TTTCATCGTTCCTGATGCGCACCTGTGAGCGGTTGGTGCAGTGCAGCCAC
TTTAATCCCCAACGACCAGTCAACCTGCTGGCCTACAGCTACTGCGAGCT
GATGGAGCAGAAGAAGCCCATACTGGGCAGCAGCACCGCCTGCGTCCTGA
TCCTCAACCGTGAGACGAGCACCGTGCACACGGCCAACATCGGCGACAGC
GGCTTCGTTGTGGTGCGCGAAGGCCAGGTGGTTCACAAGTCCGAGGAGCA
GCAGCACTATTTTAACACACCCTTCCAACTGTCATTGCCGCCGCCGGGAC
ATGGGCCCAATGTCCTCAGCGACAGCCCTGAGTCGGCGGACACGATGAGC
TTTCCGGTGCGGGATGGCGACGTGATTCTCATTGCAACCGACGGAGTGTT
CGACAACGTGCCCGAGGATCTAATGCTGCAGGTGCTTAGCGAGGTGGAGG
GCGAACGCGATCCCGTCAAGCTCCAGATGACGGCCAACAGCCTGGCGCTG
ATGGCGCGCACCCTGTCCCTCAACAGCGAGTTCCTCTCGCCCTTCGCCCT
CAGCGCCAGGAGGAATAACATTCAGGCGCGTGGCGGCAAGCCGGACGACA
TCACCGTTGTCCTGGCCACCGTGGCGATGGCAAGCTTTCTAGACCAT
BO11675.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:55:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-RB | 966 | CG12091-PB | 1..963 | 17..979 | 4815 | 100 | Plus |
CG12091-RA | 966 | CG12091-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:55:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-RB | 1907 | CG12091-RB | 275..1237 | 17..979 | 4815 | 100 | Plus |
CG12091-RA | 1824 | CG12091-RA | 275..1237 | 17..979 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:55:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1535599..1536561 | 979..17 | 4815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:55:31 has no hits.
BO11675.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:21:20 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 1..966 | 17..982 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:40:29 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 269..1233 | 13..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:58 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 275..1237 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:21:20 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 269..1233 | 13..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:00 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12091-RA | 275..1237 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:00 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1535596..1536561 | 17..981 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:58 Download gff for
BO11675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1535596..1536561 | 17..981 | 99 | | Minus |
BO11675.pep Sequence
Translation from 16 to 997
> BO11675.pep
MHSSLSWTSRAISRALRSSFSTLLETATGGGSGAAAKGATKSGATPGSSG
APRPRFVSVVCGFAKDNLRHKYKPGKYGEDSWFKASTASADVMGVADGVG
GWRSYGIDPGEFSSFLMRTCERLVQCSHFNPQRPVNLLAYSYCELMEQKK
PILGSSTACVLILNRETSTVHTANIGDSGFVVVREGQVVHKSEEQQHYFN
TPFQLSLPPPGHGPNVLSDSPESADTMSFPVRDGDVILIATDGVFDNVPE
DLMLQVLSEVEGERDPVKLQMTANSLALMARTLSLNSEFLSPFALSARRN
NIQARGGKPDDITVVLATVAMASFLDH
BO11675.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:09:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12091-PB | 321 | CG12091-PB | 1..321 | 1..321 | 1657 | 100 | Plus |
CG12091-PA | 321 | CG12091-PA | 1..321 | 1..321 | 1657 | 100 | Plus |
CG15035-PA | 374 | CG15035-PA | 107..373 | 54..319 | 860 | 59.9 | Plus |
fig-PA | 314 | CG7615-PA | 43..309 | 54..319 | 607 | 45.5 | Plus |