Clone BO11675 Report

Search the DGRC for BO11675

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:116
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG12091-RA
Protein status:BO11675.pep: validated full length
Sequenced Size:997

Clone Sequence Records

BO11675.3prime Sequence

841 bp (802 high quality bases) assembled on 2006-04-19

> BO11675.3prime
ATGGTCTAGAAAGCTTGCCATCGCCACGGTGGCCAGGACAACGGTGATGT
CGTCCGGCTTGCCGCCACGCGCCTGAATGTTATTCCTCCTGGCGCTGAGG
GCGAAGGGCGAGAGGAACTCGCTGTTGAGGGACAGGGTGCGCGCCATCAG
CGCCAGGCTGTTGGCCGTCATCTGGAGCTTGACGGGATCGCGTTCGCCCT
CCACCTCGCTAAGCACCTGCAGCATTAGATCCTCGGGCACGTTGTCGAAC
ACTCCGTCGGTTGCAATGAGAATCACGTCGCCATCCCGCACCGGAAAGCT
CATCGTGTCCGCCGACTCAGGGCTGTCGCTGAGGACATTGGGCCCATGTC
CCGGCGGCGGCAATGACAGTTGGAAGGGTGTGTTAAAATAGTGCTGCTGC
TCCTCGGACTTGTGAACCACCTGGCCTTCGCGCACCACAACGAAGCCGCT
GTCGCCGATGTTGGCCGTGTGCACGGTGCTCGTCTCACGGTTGAGGATCA
GGACGCAGGCGGTGCTGCTGCCCAGTATGGGCTTCTTCTGCTCCATCAGC
TCGCAGTAGCTGTAGGCCAGCAGGTTGACTGGTCGTTGGGGATTAAAGTG
GCTGCACTGCACCAACCGCTCACAGGTGCGCATCAGGAACGATGAAAACT
CTCCGGGATCGATGCCATAGCTTCGCCAGCCGCCCACGCCGTCGGCCACG
CCCATGACATCGGCACTGGCGGTGGAGGCCTTGAACCATGAGTCCTCGCC
GTACTTTCCCGGCTTGTACTTGTGTCGCAGGTTGTCCTTGGCGAAGCCGC
ACACCACCGACACGAAACGGGGTCGTGAGGCGCCCGAGGAT

BO11675.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-PA 966 CG12091-RA 141..963 841..19 4090 99.8 Minus
CG7615-PA 945 fig-RA 247..278 705..674 135 96.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:27:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-RB 1907 CG12091-RB 415..1237 841..19 4100 99.9 Minus
CG12091-RA 1824 CG12091-RA 415..1237 841..19 4100 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 11:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1535599..1536421 19..841 4100 99.9 Plus
Blast to na_te.dros performed on 2015-02-01 11:27:36 has no hits.

BO11675.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:13:23 Download gff for BO11675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-PA 141..966 16..841 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:39:44 Download gff for BO11675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-PA 141..966 16..841 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:37:57 Download gff for BO11675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 415..1237 19..841 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:12:23 Download gff for BO11675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 415..1237 19..841 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:12:23 Download gff for BO11675.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 1535599..1536421 19..841 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:37:57 Download gff for BO11675.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1535599..1536421 19..841 99   Plus

BO11675.5prime Sequence

889 bp (785 high quality bases) assembled on 2006-04-19

> BO11675.5prime
GAAGTTATCAGTCGACATGCACTCGTCACTCAGCTGGACCTCGCGTGCGA
TCTCTCGCGCCCTGCGCAGCAGCTTCTCCACGCTCCTGGAAACGGCCACG
GGTGGCGGAAGTGGGGCAGCAGCCAAGGGGGCCACCAAGTCGGGAGCGAC
ACCAGGATCCTCGGGCGCCCCACGACCCCGTTTCGTGTCGGTGGTGTGCG
GCTTCGCCAAGGACAACCTGCGACACAAGTACAAGCCGGGAAAGTACGGC
GAGGACTCATGGTTCAAGGCCTCCACCGCCAGTGCCGATGTCATGGGCGT
GGCCGACGGCGTGGGCGGCTGGCGAAGCTATGGCATCGATCCCGGAGAGT
TTTCATCGTTCCTGATGCGCACCTGTGAGCGGTTGGTGCAGTGCAGCCAC
TTTAATCCCCAACGACCAGTCAACCTGCTGGCCTACAGCTACTGCGAGCT
GATGGAGCAGAAGAAGCCCATACTGGGCAGCAGCACCGCCTGCGTCCTGA
TCCTCAACCGTGAGACGAGCACCGTGCACACGGCCAACATCGGCGACAGC
GGCTTCGTTGTGGTGCGCGAAGGCCAGGTGGTTCACAAGTCCGAGGAGCA
GCAGCACTATTTTAACACACCCTTCCAACTGTCATTGCCGCCGCCGGGAC
ATGGGCCCAATGTCCTCAGCGACAGCCCTGAGTCGGCGGACACGATGAGC
TTTCCGGTGCGGGATGGCGACGTGATTCTCATTGCAACCGACGGAGTGTT
CGACAACGTGCCCGAGGATCTAATGCTGCAGGTGCTTAACGAGGTGGAGG
GCGAACGCGATCCCGTCAAGCTCCCGATGACGGCCAACAGCCTGGCGCTG
ATGGCGCGCACCCTGTCCCTCAACAGCGAGTTCCTCTCG

BO11675.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-PA 966 CG12091-RA 1..873 17..889 4315 99.7 Plus
CG7615-PA 945 fig-RA 247..278 293..324 135 96.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-RB 1907 CG12091-RB 275..1147 17..889 4335 99.8 Plus
CG12091-RA 1824 CG12091-RA 275..1147 17..889 4335 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1535689..1536561 889..17 4335 99.8 Minus
Blast to na_te.dros performed on 2015-02-12 20:00:56 has no hits.

BO11675.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:13:24 Download gff for BO11675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-PA 1..873 17..889 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:39:46 Download gff for BO11675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-PA 1..873 17..889 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 11:52:46 Download gff for BO11675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 273..1147 13..889 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:30:00 Download gff for BO11675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 273..1147 13..889 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:30:00 Download gff for BO11675.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1535689..1536563 13..889 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 11:52:46 Download gff for BO11675.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1535689..1536563 13..889 99   Minus

BO11675.complete Sequence

997 bp assembled on 2006-10-11

GenBank Submission: FJ632151

> BO11675.complete
GAAGTTATCAGTCGACATGCACTCGTCACTCAGCTGGACCTCGCGTGCGA
TCTCTCGCGCCCTGCGCAGCAGCTTCTCCACGCTCCTGGAAACGGCCACG
GGTGGCGGAAGTGGGGCAGCAGCCAAGGGGGCCACCAAGTCGGGAGCGAC
ACCAGGATCCTCGGGCGCCCCACGACCCCGTTTCGTGTCGGTGGTGTGCG
GCTTCGCCAAGGACAACCTGCGACACAAGTACAAGCCGGGAAAGTACGGC
GAGGACTCATGGTTCAAGGCCTCCACCGCCAGTGCCGATGTCATGGGCGT
GGCCGACGGCGTGGGCGGCTGGCGAAGCTATGGCATCGATCCCGGAGAGT
TTTCATCGTTCCTGATGCGCACCTGTGAGCGGTTGGTGCAGTGCAGCCAC
TTTAATCCCCAACGACCAGTCAACCTGCTGGCCTACAGCTACTGCGAGCT
GATGGAGCAGAAGAAGCCCATACTGGGCAGCAGCACCGCCTGCGTCCTGA
TCCTCAACCGTGAGACGAGCACCGTGCACACGGCCAACATCGGCGACAGC
GGCTTCGTTGTGGTGCGCGAAGGCCAGGTGGTTCACAAGTCCGAGGAGCA
GCAGCACTATTTTAACACACCCTTCCAACTGTCATTGCCGCCGCCGGGAC
ATGGGCCCAATGTCCTCAGCGACAGCCCTGAGTCGGCGGACACGATGAGC
TTTCCGGTGCGGGATGGCGACGTGATTCTCATTGCAACCGACGGAGTGTT
CGACAACGTGCCCGAGGATCTAATGCTGCAGGTGCTTAGCGAGGTGGAGG
GCGAACGCGATCCCGTCAAGCTCCAGATGACGGCCAACAGCCTGGCGCTG
ATGGCGCGCACCCTGTCCCTCAACAGCGAGTTCCTCTCGCCCTTCGCCCT
CAGCGCCAGGAGGAATAACATTCAGGCGCGTGGCGGCAAGCCGGACGACA
TCACCGTTGTCCTGGCCACCGTGGCGATGGCAAGCTTTCTAGACCAT

BO11675.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:55:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-RB 966 CG12091-PB 1..963 17..979 4815 100 Plus
CG12091-RA 966 CG12091-PA 1..963 17..979 4815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:55:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-RB 1907 CG12091-RB 275..1237 17..979 4815 100 Plus
CG12091-RA 1824 CG12091-RA 275..1237 17..979 4815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1535599..1536561 979..17 4815 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:55:31 has no hits.

BO11675.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:21:20 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 1..966 17..982 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:40:29 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 269..1233 13..979 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:58 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 275..1237 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:21:20 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 269..1233 13..979 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:00 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
CG12091-RA 275..1237 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:00 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1535596..1536561 17..981 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:58 Download gff for BO11675.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1535596..1536561 17..981 99   Minus

BO11675.pep Sequence

Translation from 16 to 997

> BO11675.pep
MHSSLSWTSRAISRALRSSFSTLLETATGGGSGAAAKGATKSGATPGSSG
APRPRFVSVVCGFAKDNLRHKYKPGKYGEDSWFKASTASADVMGVADGVG
GWRSYGIDPGEFSSFLMRTCERLVQCSHFNPQRPVNLLAYSYCELMEQKK
PILGSSTACVLILNRETSTVHTANIGDSGFVVVREGQVVHKSEEQQHYFN
TPFQLSLPPPGHGPNVLSDSPESADTMSFPVRDGDVILIATDGVFDNVPE
DLMLQVLSEVEGERDPVKLQMTANSLALMARTLSLNSEFLSPFALSARRN
NIQARGGKPDDITVVLATVAMASFLDH

BO11675.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:09:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG12091-PB 321 CG12091-PB 1..321 1..321 1657 100 Plus
CG12091-PA 321 CG12091-PA 1..321 1..321 1657 100 Plus
CG15035-PA 374 CG15035-PA 107..373 54..319 860 59.9 Plus
fig-PA 314 CG7615-PA 43..309 54..319 607 45.5 Plus