Clone BO11745 Report

Search the DGRC for BO11745

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG13321-RA
Protein status:BO11745.pep: validated full length
Sequenced Size:892

Clone Sequence Records

BO11745.3prime Sequence

820 bp (778 high quality bases) assembled on 2006-04-19

> BO11745.3prime
ATGGTCTAGAAAGCTTGCGCCCTTGACCAGGACCTCGTAGTGGTCGATGC
GGACCTCCTCGCCGTCGAATGGGATGTAGAGGCAATGGTGTGACTGGTGG
ATCTTGCCGGGAGTGAGGCTGCCGTGGTGGTGGGCACGGCCGATGAACAG
GGGCTCTCCGTCGGAAGTGCGGCCGCAGAGAACGGCATTGCCGGGCACAT
TGCCATGGCTGTCGTGCACCCATCCGTACCCGTATCCGGCCAGCAGCTCG
TAGTCGTGCTTCACAACCTCACCGCCTCCGTAGGGCACATAGGCACAGCC
CTTGTTGGGGATCACCTTGGCTGGCAGCAAATCGCCCTCGTGGTAGGCGC
GACCCACATAGATCTGATCGCCATCGGCGTCGTGTCCGCCAACCACTGTT
CCGGGAACAATGCCGCGTCCGCTAGAGGCTATCCACGTCTCGGGCTGGAC
CAGCACTTCATAGGCTTCCAGACGGTGCTCCTGTCCGCCGTAGGGGATGT
ACAAACACTGGTGCGAGGGATGGACCTTGCCGGGGGTGAGGCTGCCCTGG
AAGTAACCACGGCCCACGTACAGGGGCTCACCCTCGCCAGTCTGGCCCAC
TTGGATGGCATGGGGCGGGACAGATCCACCACTGGACGGGATCCAGGAGA
AGTGATCACCGACAAGGACCTCGAAGTCATGCTTGCTGATCTCCTGACCG
CCCCATGGCACATAGGCCTGCTGCTTGCCGGGCACCACCTTCGCTGGCAG
CATCTCTCCATTGTGGTAGGCACGGCCCACAAAGATGGGATCCTGGTCGG
AGTCGTGGCCCGCTAGGATG

BO11745.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-PA 861 CG13321-RA 57..858 820..19 3985 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-RB 2043 CG13321-RB 602..1403 820..19 3995 99.9 Minus
CG13321-RA 1060 CG13321-RA 161..962 820..19 3995 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12954007..12954349 820..478 1700 99.7 Minus
2R 25286936 2R 12954774..12955072 317..19 1495 100 Minus
2R 25286936 2R 12954499..12954666 479..312 840 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:40:56 has no hits.

BO11745.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:28 Download gff for BO11745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-PA 57..861 16..820 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:42:39 Download gff for BO11745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-PA 57..861 16..820 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:11:57 Download gff for BO11745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 161..972 7..820 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:45:45 Download gff for BO11745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 161..972 7..820 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:45:45 Download gff for BO11745.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12954776..12955082 7..315 98   Minus
2R 12954007..12954349 478..820 99 -> Minus
2R 12954501..12954662 316..477 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:11:57 Download gff for BO11745.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8841512..8841854 478..820 99 -> Minus
arm_2R 8842006..8842167 316..477 100 -> Minus
arm_2R 8842281..8842587 7..315 98   Minus

BO11745.5prime Sequence

837 bp (756 high quality bases) assembled on 2006-04-19

> BO11745.5prime
GAAGTTATCAGTCGACATGGGAGACTACACCTGGATTAGCACCAACGTTT
ACGGATCCCTGCCCCCAGGAGCCATCCTAGCTGGCCACGACTCCGACCAG
GATCCCATCTTTGTGGGCCGTGCCTACCACAATGGAGAGATGCTGCCAGC
GAAGGTGGTGCCCGGCAAGCAGCAGGCCTATGTGCCATGGGGCGGTCAGG
AGATCAGCAAGCATGACTTCGAGGTCCTTGTCGGTGATCACTTCTCCTGG
ATCCCGTCCAGTGGTGGATCTGTCCCGCCCCATGCCATCCAAGTGGGCCA
GACTGGCGAGGGTGAGCCCCTGTACGTGGGCCGTGGTTACTTCCAGGGCA
GCCTCACCCCCGGCAAGGTCCATCCCTCGCACCAGTGTTTGTACATCCCC
TACGGCGGACAGGAGCACCGTCTGGAAGCCTATGAAGTGCTGGTCCAGCC
CGAGACGTGGATAGCCTCTAGCGGACGCGGCATTGTTCCCGGAACAGTGG
TTGGCGGACACGACGCCGATGGCGATCAGATCTATGTGGGTCGCGCCTAC
CACGAGGGCGATTTGCTGCCAGCCAAGGTGATCCCCAACAAGGGCTGTGC
CTATGTGCCCTACGGAGGCGGTGAGGTTGTGAAGCACGACTACGAGCTGC
TGGCCGGATACGGGTACGGATGGGTGCACGACAGCCATGGCAATGTGCCC
GGCAATGCCGTTCTCTGCGGCCGCACTTCCGACGGAGAGCCCCTGTTCAT
CGGCCGTGCCCACCACCACGGCAGCCTCACTCCCGGCAAGATCCACCAGT
CACACCATTTGCCTCTACATCCCTTTCGACGGCGAGG

BO11745.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-PA 861 CG13321-RA 1..793 17..809 3965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-RB 2043 CG13321-RB 544..1365 15..837 4075 99.8 Plus
CG13321-RA 1060 CG13321-RA 103..924 15..837 4075 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12953956..12954349 22..415 1970 100 Plus
2R 25286936 2R 12954774..12955034 576..837 1245 99.2 Plus
2R 25286936 2R 12954499..12954666 414..581 840 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:16:35 has no hits.

BO11745.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:29 Download gff for BO11745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-PA 1..820 17..837 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:42:41 Download gff for BO11745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-PA 1..820 17..837 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:57:29 Download gff for BO11745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 98..924 7..837 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:23:56 Download gff for BO11745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 98..924 7..837 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:23:56 Download gff for BO11745.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12953956..12954349 22..415 100 -> Plus
2R 12954501..12954662 416..577 100 -> Plus
2R 12954776..12955034 578..837 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:57:29 Download gff for BO11745.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8841461..8841854 22..415 100 -> Plus
arm_2R 8842006..8842167 416..577 100 -> Plus
arm_2R 8842281..8842539 578..837 99   Plus

BO11745.complete Sequence

892 bp assembled on 2006-10-11

GenBank Submission: FJ632176

> BO11745.complete
GAAGTTATCAGTCGACATGGGAGACTACACCTGGATTAGCACCAACGTTT
ACGGATCCCTGCCCCCAGGAGCCATCCTAGCTGGCCACGACTCCGACCAG
GATCCCATCTTTGTGGGCCGTGCCTACCACAATGGAGAGATGCTGCCAGC
GAAGGTGGTGCCCGGCAAGCAGCAGGCCTATGTGCCATGGGGCGGTCAGG
AGATCAGCAAGCATGACTTCGAGGTCCTTGTCGGTGATCACTTCTCCTGG
ATCCCGTCCAGTGGTGGATCTGTCCCGCCCCATGCCATCCAAGTGGGCCA
GACTGGCGAGGGTGAGCCCCTGTACGTGGGCCGTGGTTACTTCCAGGGCA
GCCTCACCCCCGGCAAGGTCCATCCCTCGCACCAGTGTTTGTACATCCCC
TACGGCGGACAGGAGCACCGTCTGGAAGCCTATGAAGTGCTGGTCCAGCC
CGAGACGTGGATAGCCTCTAGCGGACGCGGCATTGTTCCCGGAACAGTGG
TTGGCGGACACGACGCCGATGGCGATCAGATCTATGTGGGTCGCGCCTAC
CACGAGGGCGATTTGCTGCCAGCCAAGGTGATCCCCAACAAGGGCTGTGC
CTATGTGCCCTACGGAGGCGGTGAGGTTGTGAAGCACGACTACGAGCTGC
TGGCCGGATACGGGTACGGATGGGTGCACGACAGCCATGGCAATGTGCCC
GGCAATGCCGTTCTCTGCGGCCGCACTTCCGACGGAGAGCCCCTGTTCAT
CGGCCGTGCCCACCACCACGGCAGCCTCACTCCCGGCAAGATCCACCAGT
CACACCATTGCCTCTACATCCCATTCGACGGCGAGGAGGTCCGCATCGAC
CACTACGAGGTCCTGGTCAAGGGCGCAAGCTTTCTAGACCAT

BO11745.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-RB 861 CG13321-PB 1..858 17..874 4290 100 Plus
CG13321-RA 861 CG13321-PA 1..858 17..874 4290 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-RB 2043 CG13321-RB 544..1403 15..874 4300 100 Plus
CG13321-RA 1060 CG13321-RA 103..962 15..874 4300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12953956..12954349 22..415 1970 100 Plus
2R 25286936 2R 12954774..12955072 576..874 1495 100 Plus
2R 25286936 2R 12954499..12954666 414..581 840 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:30:40 has no hits.

BO11745.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:04 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 1..861 17..877 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:38:42 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 95..969 7..886 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:08 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 105..962 17..876 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:04 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 95..969 7..886 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:18 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
CG13321-RA 105..962 17..876 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:18 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12953953..12954349 17..415 98 -> Plus
2R 12954501..12954662 416..577 100 -> Plus
2R 12954776..12955072 578..876 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:08 Download gff for BO11745.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8841458..8841854 17..415 98 -> Plus
arm_2R 8842006..8842167 416..577 100 -> Plus
arm_2R 8842281..8842577 578..876 99   Plus

BO11745.pep Sequence

Translation from 16 to 892

> BO11745.pep
MGDYTWISTNVYGSLPPGAILAGHDSDQDPIFVGRAYHNGEMLPAKVVPG
KQQAYVPWGGQEISKHDFEVLVGDHFSWIPSSGGSVPPHAIQVGQTGEGE
PLYVGRGYFQGSLTPGKVHPSHQCLYIPYGGQEHRLEAYEVLVQPETWIA
SSGRGIVPGTVVGGHDADGDQIYVGRAYHEGDLLPAKVIPNKGCAYVPYG
GGEVVKHDYELLAGYGYGWVHDSHGNVPGNAVLCGRTSDGEPLFIGRAHH
HGSLTPGKIHQSHHCLYIPFDGEEVRIDHYEVLVKGASFLDH

BO11745.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG13321-PB 286 CG13321-PB 1..286 1..286 1596 100 Plus
CG13321-PA 286 CG13321-PA 1..286 1..286 1596 100 Plus
CG44250-PB 286 CG44250-PB 2..285 3..285 878 56.5 Plus
CG44250-PC 297 CG44250-PC 13..296 3..285 878 56.5 Plus
CG32633-PB 285 CG32633-PB 1..284 1..285 811 53.3 Plus
CG13321-PB 286 CG13321-PB 5..149 147..290 444 52.4 Plus
CG13321-PA 286 CG13321-PA 5..149 147..290 444 52.4 Plus