Clone Sequence Records
BO11752.3prime Sequence
585 bp (500 high quality bases) assembled on 2006-04-19
> BO11752.3prime
ATGGTCTAGAAAGCTTGCGAAACGGTGACGGTAGACGCGACGACGCACGG
TCTTGTAGCGGTATCCATCATTGGAAGCGGGCTCGATCTCCTCCAGAACC
TGAGTGTTGGTTGGCTGGTAGACGGGAGCGGGAGCTGGTTGGTAAACTGG
GGCAGGGGCCGGGATGCTGATGGGAGCTGGCTGGTAAACGGGAGCCGGGG
CTGGGATGCTGATTGGTGCAGGTGGCACATAGGACTTAACGGGAGCTGGG
GCTGGGATCACAACTGGAGCGGGAGCAGGAGCAGGGATCACAACTGGTGC
TGGAGCAGGGGCTGGGATCACAACGGGAGCGGGAGCAGGCTGGTAAACGG
GAGCTGGAGCCGGGATGCTCACGGGAATGGGAGCAGGGGCTGGCTGGTAA
ACCGGAGCTGGTGCTGGTGCGGGGGGAATGTAGGTGTTCACTGGAGCTGG
GGCAGGGATCTCAATTGGAGCCGGATCTGGGATGCTGATGGGAGCAGGAG
CTGGCTGGTAAACTGGGGCTGGGATCCTTAAAGGGAGTAGGAGCTGGCTT
GGTAACTGGGGCTGGGATGCTGATGGGTGCGGGTG
BO11752.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-PA | 837 | CG10953-RA | 325..834 | 528..19 | 2525 | 99.8 | Minus |
CG10953-PA | 837 | CG10953-RA | 148..254 | 345..239 | 310 | 91.5 | Minus |
CG10953-PA | 837 | CG10953-RA | 286..334 | 525..477 | 195 | 95.9 | Minus |
CG30457-PA | 570 | CG30457-RA | 261..299 | 454..416 | 170 | 97.4 | Minus |
CG30457-PA | 570 | CG30457-RA | 148..191 | 447..404 | 170 | 95.4 | Minus |
CG10953-PA | 837 | CG10953-RA | 269..300 | 585..554 | 160 | 100 | Minus |
CG13705-PA | 1299 | CG13705-RA | 965..996 | 71..40 | 160 | 100 | Minus |
CG13705-PA | 1299 | CG13705-RA | 1100..1131 | 71..40 | 160 | 100 | Minus |
CG32237-PA | 2736 | CG32237-RA | 167..194 | 71..44 | 140 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-RB | 1489 | CG10953-RB | 457..1022 | 585..19 | 2720 | 98.9 | Minus |
CG10953-RA | 974 | CG10953-RA | 319..884 | 585..19 | 2720 | 98.9 | Minus |
CG10953-RB | 1489 | CG10953-RB | 276..551 | 411..124 | 595 | 82 | Minus |
CG10953-RA | 974 | CG10953-RA | 138..413 | 411..124 | 595 | 82 | Minus |
CG10953-RB | 1489 | CG10953-RB | 303..411 | 354..240 | 300 | 85.2 | Minus |
CG10953-RA | 974 | CG10953-RA | 165..273 | 354..240 | 300 | 85.2 | Minus |
CG10953-RB | 1489 | CG10953-RB | 372..441 | 339..270 | 215 | 87.1 | Minus |
CG10953-RB | 1489 | CG10953-RB | 474..522 | 525..477 | 215 | 95.9 | Minus |
CG10953-RA | 974 | CG10953-RA | 234..303 | 339..270 | 215 | 87.1 | Minus |
CG10953-RA | 974 | CG10953-RA | 336..384 | 525..477 | 215 | 95.9 | Minus |
CG10953-RB | 1489 | CG10953-RB | 407..512 | 475..376 | 195 | 80.2 | Minus |
CG10953-RA | 974 | CG10953-RA | 269..374 | 475..376 | 195 | 80.2 | Minus |
CG30457-RA | 646 | CG30457-RA | 185..235 | 454..404 | 195 | 92.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:43:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17165551..17166116 | 19..585 | 2695 | 98.8 | Plus |
2R | 25286936 | 2R | 17166022..17166246 | 124..354 | 535 | 83.1 | Plus |
2R | 25286936 | 2R | 17166162..17166231 | 240..309 | 290 | 94.3 | Plus |
2R | 25286936 | 2R | 17166051..17166099 | 477..525 | 215 | 95.9 | Plus |
2R | 25286936 | 2R | 17166132..17166201 | 270..339 | 215 | 87.1 | Plus |
2R | 25286936 | 2R | 17165772..17165841 | 270..339 | 200 | 85.7 | Plus |
2R | 25286936 | 2R | 17165802..17165871 | 240..309 | 200 | 85.7 | Plus |
2R | 25286936 | 2R | 17160533..17160583 | 404..454 | 195 | 92.2 | Plus |
2R | 25286936 | 2R | 17160425..17160463 | 416..454 | 180 | 97.4 | Plus |
Blast to na_te.dros performed 2015-02-12 04:43:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2852 | 260..338 | 109 | 62 | Plus |
BO11752.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:42 Download gff for
BO11752.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-PA | 269..837 | 15..585 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:42:59 Download gff for
BO11752.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-PA | 269..837 | 15..585 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:28:23 Download gff for
BO11752.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 319..891 | 11..585 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:02:33 Download gff for
BO11752.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 319..891 | 11..585 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:02:33 Download gff for
BO11752.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17165544..17166116 | 11..585 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:28:23 Download gff for
BO11752.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13053049..13053621 | 11..585 | 98 | | Plus |
BO11752.5prime Sequence
822 bp (699 high quality bases) assembled on 2006-04-19
> BO11752.5prime
GAAGTTATCAGTCGACATGAAATTCCTGGTTGTTGCCTTTGCCGTTCTGG
CCTGCGCCTATGGTGATGTCTCCCATTTGGGTTACGACTACTCTCCTCCG
GCCCCAGCTCCGGTTTACCAGCCCGCCCCGGCTCCGGTCTACCAGCCCGC
CCCCGCTCCGGTCTACCAGCCTGCTCCAGCACCAGTTGTGATCCCTGCTC
CTGCTCCAGCTCCAGTTGTGATCCCTGCTCCTGCTCCCGCTCCAGTTGTG
ATTCCGGCTCCAGCTCCCGTGAAGACGTACGTCCCACCCGCACCCATCAG
CATCCCAGCCCCAGTTTACCAGCCAGCTCCTGCTCCCATTAGGATCCCAG
CCCCAGTTTACCAGCCAGCTCCTGCTCCCATCAGCATCCCAGCTCCGGCT
CCAATTGAGATCCCTGCCCCAGCTCCAGTGAACACCTACATTCCCCCCGC
ACCAGCACCAGCTCCGGTTTACCAGCCAGCCCCTGCTCCCATTCCCGTGA
GCATCCCGGCTCCAGCTCCCGTTTACCAGCCTGCTCCCGCTCCCGTTGTG
ATCCCAGCCCCTGCTCCAGCACCAGTTGTGATCCCTGCTCCTGCTCCCGC
TCCAGTTGTGATCCCAGCCCCAGCTCCCGTTAAGTCCTATGTGCCACCTG
CACCAATCAGCATCCCAGCCCCGGCTCCCGTTTACCAGCCAGCTCCCATC
AGCATCCCGGCCCCTGCCCCAGTTTACCAACCAGCTCCCGCTCCCGTCTA
CCAGCCAACCAAAACTCAGGTCCTGGAGGAGATCGAGCCCGCTTCCAATG
ATGGATACCGCTACAAGAACGT
BO11752.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-PA | 837 | CG10953-RA | 1..802 | 17..818 | 3960 | 99.7 | Plus |
CG30457-PA | 570 | CG30457-RA | 261..299 | 415..453 | 170 | 97.4 | Plus |
CG30457-PA | 570 | CG30457-RA | 148..191 | 422..465 | 170 | 95.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-RB | 1489 | CG10953-RB | 188..994 | 16..822 | 3990 | 99.6 | Plus |
CG10953-RA | 974 | CG10953-RA | 50..856 | 16..822 | 3990 | 99.6 | Plus |
CG10953-RB | 1489 | CG10953-RB | 276..551 | 458..745 | 595 | 82 | Plus |
CG10953-RB | 1489 | CG10953-RB | 630..917 | 104..379 | 595 | 82 | Plus |
CG10953-RA | 974 | CG10953-RA | 138..413 | 458..745 | 595 | 82 | Plus |
CG10953-RA | 974 | CG10953-RA | 492..779 | 104..379 | 595 | 82 | Plus |
CG10953-RB | 1489 | CG10953-RB | 303..411 | 515..629 | 300 | 85.2 | Plus |
CG10953-RB | 1489 | CG10953-RB | 687..801 | 131..239 | 300 | 85.2 | Plus |
CG10953-RA | 974 | CG10953-RA | 165..273 | 515..629 | 300 | 85.2 | Plus |
CG10953-RA | 974 | CG10953-RA | 549..663 | 131..239 | 300 | 85.2 | Plus |
CG10953-RB | 1489 | CG10953-RB | 372..441 | 530..599 | 215 | 87.1 | Plus |
CG10953-RB | 1489 | CG10953-RB | 702..771 | 200..269 | 215 | 87.1 | Plus |
CG10953-RA | 974 | CG10953-RA | 234..303 | 530..599 | 215 | 87.1 | Plus |
CG10953-RA | 974 | CG10953-RA | 564..633 | 200..269 | 215 | 87.1 | Plus |
CG10953-RB | 1489 | CG10953-RB | 405..512 | 392..493 | 205 | 80.6 | Plus |
CG10953-RB | 1489 | CG10953-RB | 564..665 | 233..340 | 205 | 80.6 | Plus |
CG10953-RA | 974 | CG10953-RA | 267..374 | 392..493 | 205 | 80.6 | Plus |
CG10953-RA | 974 | CG10953-RA | 426..527 | 233..340 | 205 | 80.6 | Plus |
CG30457-RA | 646 | CG30457-RA | 185..235 | 415..465 | 195 | 92.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:42:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17165579..17166382 | 822..19 | 3975 | 99.6 | Minus |
2R | 25286936 | 2R | 17165656..17165886 | 379..155 | 535 | 83.1 | Minus |
2R | 25286936 | 2R | 17166022..17166246 | 745..515 | 535 | 83.1 | Minus |
2R | 25286936 | 2R | 17166132..17166276 | 239..101 | 325 | 84.8 | Minus |
2R | 25286936 | 2R | 17166162..17166300 | 269..125 | 325 | 84.8 | Minus |
2R | 25286936 | 2R | 17165772..17165841 | 239..170 | 290 | 94.3 | Minus |
2R | 25286936 | 2R | 17166162..17166231 | 629..560 | 290 | 94.3 | Minus |
2R | 25286936 | 2R | 17166050..17166108 | 393..335 | 235 | 93.2 | Minus |
2R | 25286936 | 2R | 17166008..17166066 | 351..293 | 235 | 93.2 | Minus |
2R | 25286936 | 2R | 17165802..17165871 | 269..200 | 215 | 87.1 | Minus |
2R | 25286936 | 2R | 17166132..17166201 | 599..530 | 215 | 87.1 | Minus |
2R | 25286936 | 2R | 17165772..17165841 | 599..530 | 200 | 85.7 | Minus |
2R | 25286936 | 2R | 17165802..17165871 | 629..560 | 200 | 85.7 | Minus |
2R | 25286936 | 2R | 17160533..17160583 | 465..415 | 195 | 92.2 | Minus |
Blast to na_te.dros performed 2015-02-11 10:42:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2852 | 249..171 | 127 | 64.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2852 | 609..531 | 109 | 62 | Minus |
BO11752.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:43 Download gff for
BO11752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-PA | 1..806 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:00 Download gff for
BO11752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-PA | 1..806 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 03:08:27 Download gff for
BO11752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 45..856 | 11..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:26:30 Download gff for
BO11752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 45..856 | 11..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:26:30 Download gff for
BO11752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17165579..17166384 | 16..822 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 03:08:27 Download gff for
BO11752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13053084..13053889 | 16..822 | 99 | | Minus |
BO11752.complete Sequence
868 bp assembled on 2006-10-11
GenBank Submission: FJ632180
> BO11752.complete
GAAGTTATCAGTCGACATGAAATTCCTGGTTGTTGCCTTTGCCGTTCTGG
CCTGCGCCTATGGTGATGTCTCCCATTTGGGTTACGACTACTCTCCTCCG
GCCCCAGCTCCGGTTTACCAGCCCGCCCCGGCTCCGGTCTACCAGCCCGC
CCCCGCTCCGGTCTACCAGCCTGCTCCAGCACCAGTTGTGATCCCTGCTC
CTGCTCCAGCTCCAGTTGTGATCCCTGCTCCTGCTCCCGCTCCAGTTGTG
ATTCCGGCTCCAGCTCCCGTGAAGACGTACGTCCCACCCGCACCCATCAG
CATCCCAGCCCCAGTTTACCAGCCAGCTCCTGCTCCCATTAGGATCCCAG
CCCCAGTTTACCAGCCAGCTCCTGCTCCCATCAGCATCCCAGCTCCGGCT
CCAATTGAGATCCCTGCCCCAGCTCCAGTGAACACCTACATTCCCCCCGC
ACCAGCACCAGCTCCGGTTTACCAGCCAGCCCCTGCTCCCATTCCCGTGA
GCATCCCGGCTCCAGCTCCCGTTTACCAGCCTGCTCCCGCTCCCGTTGTG
ATCCCAGCCCCTGCTCCAGCACCAGTTGTGATCCCTGCTCCTGCTCCCGC
TCCAGTTGTGATCCCAGCCCCAGCTCCCGTTAAGTCCTATGTGCCACCTG
CACCAATCAGCATCCCAGCCCCGGCTCCCGTTTACCAGCCAGCTCCCATC
AGCATCCCGGCCCCTGCCCCAGTTTACCAACCAGCTCCCGCTCCCGTCTA
CCAGCCAACCAACACTCAGGTTCTGGAGGAGATCGAGCCCGCTTCCAATG
ATGGATACCGCTACAAGACCGTGCGTCGTCGCGTCTACCGTCACCGTTTC
GCAAGCTTTCTAGACCAT
BO11752.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:15:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-RB | 837 | CG10953-PB | 1..834 | 17..850 | 4170 | 100 | Plus |
CG10953-RA | 837 | CG10953-PA | 1..834 | 17..850 | 4170 | 100 | Plus |
CG10953-RB | 837 | CG10953-PB | 139..363 | 515..745 | 535 | 83.1 | Plus |
CG10953-RB | 837 | CG10953-PB | 499..729 | 155..379 | 535 | 83.1 | Plus |
CG10953-RA | 837 | CG10953-PA | 139..363 | 515..745 | 535 | 83.1 | Plus |
CG10953-RA | 837 | CG10953-PA | 499..729 | 155..379 | 535 | 83.1 | Plus |
CG10953-RB | 837 | CG10953-PB | 85..223 | 125..269 | 325 | 84.8 | Plus |
CG10953-RB | 837 | CG10953-PB | 109..253 | 101..239 | 325 | 84.8 | Plus |
CG10953-RA | 837 | CG10953-PA | 85..223 | 125..269 | 325 | 84.8 | Plus |
CG10953-RA | 837 | CG10953-PA | 109..253 | 101..239 | 325 | 84.8 | Plus |
CG10953-RB | 837 | CG10953-PB | 154..223 | 560..629 | 290 | 94.3 | Plus |
CG10953-RB | 837 | CG10953-PB | 544..613 | 170..239 | 290 | 94.3 | Plus |
CG10953-RA | 837 | CG10953-PA | 154..223 | 560..629 | 290 | 94.3 | Plus |
CG10953-RA | 837 | CG10953-PA | 544..613 | 170..239 | 290 | 94.3 | Plus |
CG10953-RB | 837 | CG10953-PB | 277..335 | 335..393 | 235 | 93.2 | Plus |
CG10953-RB | 837 | CG10953-PB | 319..377 | 293..351 | 235 | 93.2 | Plus |
CG10953-RA | 837 | CG10953-PA | 277..335 | 335..393 | 235 | 93.2 | Plus |
CG10953-RA | 837 | CG10953-PA | 319..377 | 293..351 | 235 | 93.2 | Plus |
CG10953-RB | 837 | CG10953-PB | 184..253 | 530..599 | 215 | 87.1 | Plus |
CG10953-RB | 837 | CG10953-PB | 514..583 | 200..269 | 215 | 87.1 | Plus |
CG10953-RA | 837 | CG10953-PA | 514..583 | 200..269 | 215 | 87.1 | Plus |
CG10953-RA | 837 | CG10953-PA | 184..253 | 530..599 | 215 | 87.1 | Plus |
CG10953-RB | 837 | CG10953-PB | 514..583 | 560..629 | 200 | 85.7 | Plus |
CG10953-RB | 837 | CG10953-PB | 544..613 | 530..599 | 200 | 85.7 | Plus |
CG10953-RA | 837 | CG10953-PA | 514..583 | 560..629 | 200 | 85.7 | Plus |
CG10953-RA | 837 | CG10953-PA | 544..613 | 530..599 | 200 | 85.7 | Plus |
CG30457-RA | 570 | CG30457-PA | 141..191 | 415..465 | 195 | 92.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:15:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-RB | 1489 | CG10953-RB | 188..1022 | 16..850 | 4175 | 100 | Plus |
CG10953-RA | 974 | CG10953-RA | 50..884 | 16..850 | 4175 | 100 | Plus |
CG10953-RB | 1489 | CG10953-RB | 327..551 | 515..745 | 535 | 83.1 | Plus |
CG10953-RB | 1489 | CG10953-RB | 687..917 | 155..379 | 535 | 83.1 | Plus |
CG10953-RA | 974 | CG10953-RA | 189..413 | 515..745 | 535 | 83.1 | Plus |
CG10953-RA | 974 | CG10953-RA | 549..779 | 155..379 | 535 | 83.1 | Plus |
CG10953-RB | 1489 | CG10953-RB | 273..411 | 125..269 | 325 | 84.8 | Plus |
CG10953-RB | 1489 | CG10953-RB | 297..441 | 101..239 | 325 | 84.8 | Plus |
CG10953-RA | 974 | CG10953-RA | 135..273 | 125..269 | 325 | 84.8 | Plus |
CG10953-RA | 974 | CG10953-RA | 159..303 | 101..239 | 325 | 84.8 | Plus |
CG10953-RB | 1489 | CG10953-RB | 342..411 | 560..629 | 290 | 94.3 | Plus |
CG10953-RB | 1489 | CG10953-RB | 732..801 | 170..239 | 290 | 94.3 | Plus |
CG10953-RA | 974 | CG10953-RA | 204..273 | 560..629 | 290 | 94.3 | Plus |
CG10953-RA | 974 | CG10953-RA | 594..663 | 170..239 | 290 | 94.3 | Plus |
CG10953-RB | 1489 | CG10953-RB | 465..523 | 335..393 | 235 | 93.2 | Plus |
CG10953-RB | 1489 | CG10953-RB | 507..565 | 293..351 | 235 | 93.2 | Plus |
CG10953-RA | 974 | CG10953-RA | 327..385 | 335..393 | 235 | 93.2 | Plus |
CG10953-RA | 974 | CG10953-RA | 369..427 | 293..351 | 235 | 93.2 | Plus |
CG10953-RB | 1489 | CG10953-RB | 702..771 | 200..269 | 215 | 87.1 | Plus |
CG10953-RB | 1489 | CG10953-RB | 372..441 | 530..599 | 215 | 87.1 | Plus |
CG10953-RA | 974 | CG10953-RA | 234..303 | 530..599 | 215 | 87.1 | Plus |
CG10953-RA | 974 | CG10953-RA | 564..633 | 200..269 | 215 | 87.1 | Plus |
CG10953-RB | 1489 | CG10953-RB | 702..771 | 560..629 | 200 | 85.7 | Plus |
CG10953-RB | 1489 | CG10953-RB | 732..801 | 530..599 | 200 | 85.7 | Plus |
CG10953-RA | 974 | CG10953-RA | 564..633 | 560..629 | 200 | 85.7 | Plus |
CG10953-RA | 974 | CG10953-RA | 594..663 | 530..599 | 200 | 85.7 | Plus |
CG30457-RA | 646 | CG30457-RA | 185..235 | 415..465 | 195 | 92.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17165551..17166382 | 850..19 | 4160 | 100 | Minus |
2R | 25286936 | 2R | 17165656..17165886 | 379..155 | 535 | 83.1 | Minus |
2R | 25286936 | 2R | 17166022..17166246 | 745..515 | 535 | 83.1 | Minus |
2R | 25286936 | 2R | 17166132..17166276 | 239..101 | 325 | 84.8 | Minus |
2R | 25286936 | 2R | 17166162..17166300 | 269..125 | 325 | 84.8 | Minus |
2R | 25286936 | 2R | 17165772..17165841 | 239..170 | 290 | 94.3 | Minus |
2R | 25286936 | 2R | 17166162..17166231 | 629..560 | 290 | 94.3 | Minus |
2R | 25286936 | 2R | 17166008..17166066 | 351..293 | 235 | 93.2 | Minus |
2R | 25286936 | 2R | 17166050..17166108 | 393..335 | 235 | 93.2 | Minus |
2R | 25286936 | 2R | 17165802..17165871 | 269..200 | 215 | 87.1 | Minus |
2R | 25286936 | 2R | 17166132..17166201 | 599..530 | 215 | 87.1 | Minus |
2R | 25286936 | 2R | 17165772..17165841 | 599..530 | 200 | 85.7 | Minus |
2R | 25286936 | 2R | 17165802..17165871 | 629..560 | 200 | 85.7 | Minus |
2R | 25286936 | 2R | 17160533..17160583 | 465..415 | 195 | 92.2 | Minus |
Blast to na_te.dros performed 2014-11-27 10:15:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2852 | 249..171 | 127 | 64.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2852 | 609..531 | 109 | 62 | Minus |
BO11752.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:52 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 1..837 | 17..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:27:11 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 41..887 | 11..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:33 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 51..884 | 17..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:52 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 41..887 | 11..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:17:05 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10953-RA | 51..884 | 17..852 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:17:05 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17165549..17166383 | 17..852 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:33 Download gff for
BO11752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13053054..13053888 | 17..852 | 99 | | Minus |
BO11752.pep Sequence
Translation from 16 to 868
> BO11752.pep
MKFLVVAFAVLACAYGDVSHLGYDYSPPAPAPVYQPAPAPVYQPAPAPVY
QPAPAPVVIPAPAPAPVVIPAPAPAPVVIPAPAPVKTYVPPAPISIPAPV
YQPAPAPIRIPAPVYQPAPAPISIPAPAPIEIPAPAPVNTYIPPAPAPAP
VYQPAPAPIPVSIPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPVVIP
APAPVKSYVPPAPISIPAPAPVYQPAPISIPAPAPVYQPAPAPVYQPTNT
QVLEEIEPASNDGYRYKTVRRRVYRHRFASFLDH
BO11752.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:19:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10953-PB | 278 | CG10953-PB | 1..278 | 1..278 | 1493 | 100 | Plus |
CG10953-PA | 278 | CG10953-PA | 1..278 | 1..278 | 1493 | 100 | Plus |
CG31626-PB | 285 | CG31626-PB | 1..282 | 1..272 | 551 | 53 | Plus |
CG31626-PA | 285 | CG31626-PA | 1..282 | 1..272 | 551 | 53 | Plus |
CG30457-PA | 189 | CG30457-PA | 27..189 | 112..278 | 486 | 61.7 | Plus |