Clone BO11755 Report

Search the DGRC for BO11755

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG9018-RB
Protein status:BO11755.pep: validated full length
Sequenced Size:1057

Clone Sequence Records

BO11755.3prime Sequence

945 bp (853 high quality bases) assembled on 2006-04-19

> BO11755.3prime
ATGGTCTAGAAAGCTTGCTCTAACAACCCCAAGGACCATGCATTGCCTAG
ACCATGAAGAACGTACATCGAGGCGTTGCTCAGCCTGGGAGAGAAGTTCC
TTCTGCTCCGCTTGAAAATCTCGCAGCATGGTCGCCAACTTGGAGCGCTC
CTCCATCTCCGCCGCCAACCGAGCATTGTAGTCGTTCAGCAGATCCACAG
CTTCGTTCACCTGTATGGCCAGTTCCTTGGCCTTGTCCTTATCCTCCAGC
TTGCTGATGCAGCTAATCTCGGATATTTCCTGGGGCAGCTTGGCGATACG
TTCGCGCACCACAGCATCGCTGGATGCGGAGTTTTCGATGCTGGTCAGGG
CCCTGATGAGCTCCTCGGGCTCCGGTGGCTCTCCCAAAGGCAAGTAGGGT
GGCGTGTGGCCGTTCTCGGGTTCCACAGAAACTACTTCCTCCGTCGGAGG
AGCTGAGTTCGCGCTGCTGCCTTGGACGTGATGGCGCGAGCGCTTGGACT
TAGAGTGGCGATCCTCGTGCTTGCGCTTCTCGCGGCGCTCGGATTTCTCG
GGCTTGCCGCTGCCGCCGTGATCCTTCTCCTTCTCGGGCTTCTCACTATC
GCCATTGGTCTTGCCATTGCTGCTGGAGCTGCTGCCAGGAGCCTCCTTGT
GTAATCGCGACCTCCAGTCGGCAATGGTCTTGGGATCGTAGACGCCCCGC
TCCAGCCAGATGTTTAGGATCCTTCCCAGGCTGCCCAGCAACTTGTCCGA
GTTGCACTTCTCGCCAATGTGGGCGAACACCTTGCCCAGCACAAGGCTGT
ACTCCTTGCCGTACTCCGGGCCCTTCTTCTTGCTGTTCTGGATCACGTCG
TTGGCCAGGTACATGAAGGTCAGCTTCTTAGGCTCCGGCACGTTCTCCAG
CTCCCGCTGCCAGGTCTTTCAATCGCTGCACTGTGTTTTCGGGTG

BO11755.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-PB 1026 CG9018-RB 126..1023 916..19 4490 100 Minus
CG9018-PA 1128 CG9018-RA 126..976 916..66 4255 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-RB 1283 CG9018-RB 224..1148 942..19 4585 99.8 Minus
CG9018-RA 1395 CG9018-RA 224..1101 942..66 4350 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2236047..2236730 208..891 3420 100 Plus
3L 28110227 3L 2235781..2235974 19..212 970 100 Plus
3L 28110227 3L 2236801..2236853 891..942 200 96.2 Plus
Blast to na_te.dros performed on 2015-02-12 11:41:45 has no hits.

BO11755.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:49 Download gff for BO11755.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-PB 97..1026 15..945 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:08 Download gff for BO11755.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-PB 97..1026 15..945 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:11:59 Download gff for BO11755.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 222..1153 14..945 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:38 Download gff for BO11755.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 222..1153 14..945 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:38 Download gff for BO11755.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 2235776..2235972 14..210 98 <- Plus
3L 2236050..2236729 211..890 100 <- Plus
3L 2236801..2236855 891..945 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:11:59 Download gff for BO11755.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2235776..2235972 14..210 98 <- Plus
arm_3L 2236050..2236729 211..890 100 <- Plus
arm_3L 2236801..2236855 891..945 94   Plus

BO11755.5prime Sequence

976 bp (891 high quality bases) assembled on 2006-04-19

> BO11755.5prime
GAAGTTATCAGTCGACATGTCGGCCTTCACGGATTCGGCGCTACTCAAGA
AGCTGGCCGAGCTAAACAGCAGCCAGCAGAGCATCCAGACGCTCTCCCTG
TGGCTAATTCACCACCGAAAACACAGTGCAGCGATTGTAAGGACCTGGCA
GCGGGAGCTGGAGAACGTGCCGGAGCCTAAGAAGCTGACCTTCATGTACC
TGGCCAACGACGTGATCCAGAACAGCAAGAAGAAGGGCCCGGAGTACGGC
AAGGAGTACAGCCTTGTGCTGGGCAAGGTGTTCGCCCACATTGGCGAGAA
GTGCAACTCGGACAAGTTGCTGGGCAGCCTGGGAAGGATCCTAAACATCT
GGCTGGAGCGGGGCGTCTACGATCCCAAGACCATTGCCGACTGGAGGTCG
CGATTACACAAGGAGGCTCCTGGCAGCAGCTCCAGCAGCAATGGCAAGAC
CAATGGCGATAGTGAGAAGCCCGAGAAGGAGAAGGATCACGGCGGCAGCG
GCAAGCCCGAGAAATCCGAGCGCCGCGAGAAGCGCAAGCACGAGGATCGC
CACTCTAAGTCCAAGCGCTCGCGCCATCACGTCCAAGGCAGCAGCGCGAA
CTCAGCTCCTCCGACGGAGGAAGTAGTTTCTGTGGAACCCGAGAACGGCC
ACACGCCACCCTACTTGCCTTTGGGAGAGCCACCGGAGCCCGAGGAGCTC
ATCAGGGCCCTGACCAGCATCGAAAACTCCGCATCCAGCGATGCTGTGGT
GCGCGAACGTATCGCCAAGCTGCCCCAGGAAATATCCGAGATTAGCTGCA
TCAGCAAGCTGGAGGATAAGGACAAGGCCAAGGAACTGGCCATACAGGTG
AACGAAGCTGTGGATCTGCTGAACGACTACAATGCTCGGTTGGCGGCGGA
GATGGAGGAGCGCTCCAAGTTGGCGACCATGCTGCGAGATTTTCAAGCGG
AGCAGAGGGAACTTCCTCTCCAGGCT

BO11755.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-PB 1026 CG9018-RB 1..949 17..965 4720 99.8 Plus
CG9018-PA 1128 CG9018-RA 1..949 17..965 4720 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-RA 1395 CG9018-RA 125..1085 16..976 4745 99.7 Plus
CG9018-RB 1283 CG9018-RB 125..1085 16..976 4745 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2236047..2236730 850..167 3420 100 Minus
3L 28110227 3L 2236801..2236952 167..16 760 100 Minus
3L 28110227 3L 2235855..2235974 965..846 585 99.2 Minus
Blast to na_te.dros performed on 2015-02-12 01:12:23 has no hits.

BO11755.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:50 Download gff for BO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-PB 1..960 17..976 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:10 Download gff for BO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-PA 1..960 17..976 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:19:25 Download gff for BO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 118..1085 9..976 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:10:41 Download gff for BO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 118..1085 9..976 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:10:41 Download gff for BO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2235844..2235972 848..976 97 <- Minus
3L 2236050..2236729 168..847 100 <- Minus
3L 2236801..2236956 9..167 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:19:25 Download gff for BO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2235844..2235972 848..976 97 <- Minus
arm_3L 2236050..2236729 168..847 100 <- Minus
arm_3L 2236801..2236956 9..167 98   Minus

BO11755.complete Sequence

1057 bp assembled on 2006-10-11

GenBank Submission: FJ632181

> BO11755.complete
GAAGTTATCAGTCGACATGTCGGCCTTCACGGATTCGGCGCTACTCAAGA
AGCTGGCCGAGCTAAACAGCAGCCAGCAGAGCATCCAGACGCTCTCCCTG
TGGCTAATTCACCACCGAAAACACAGTGCAGCGATTGTAAGGACCTGGCA
GCGGGAGCTGGAGAACGTGCCGGAGCCTAAGAAGCTGACCTTCATGTACC
TGGCCAACGACGTGATCCAGAACAGCAAGAAGAAGGGCCCGGAGTACGGC
AAGGAGTACAGCCTTGTGCTGGGCAAGGTGTTCGCCCACATTGGCGAGAA
GTGCAACTCGGACAAGTTGCTGGGCAGCCTGGGAAGGATCCTAAACATCT
GGCTGGAGCGGGGCGTCTACGATCCCAAGACCATTGCCGACTGGAGGTCG
CGATTACACAAGGAGGCTCCTGGCAGCAGCTCCAGCAGCAATGGCAAGAC
CAATGGCGATAGTGAGAAGCCCGAGAAGGAGAAGGATCACGGCGGCAGCG
GCAAGCCCGAGAAATCCGAGCGCCGCGAGAAGCGCAAGCACGAGGATCGC
CACTCTAAGTCCAAGCGCTCGCGCCATCACGTCCAAGGCAGCAGCGCGAA
CTCAGCTCCTCCGACGGAGGAAGTAGTTTCTGTGGAACCCGAGAACGGCC
ACACGCCACCCTACTTGCCTTTGGGAGAGCCACCGGAGCCCGAGGAGCTC
ATCAGGGCCCTGACCAGCATCGAAAACTCCGCATCCAGCGATGCTGTGGT
GCGCGAACGTATCGCCAAGCTGCCCCAGGAAATATCCGAGATTAGCTGCA
TCAGCAAGCTGGAGGATAAGGACAAGGCCAAGGAACTGGCCATACAGGTG
AACGAAGCTGTGGATCTGCTGAACGACTACAATGCTCGGTTGGCGGCGGA
GATGGAGGAGCGCTCCAAGTTGGCGACCATGCTGCGAGATTTTCAAGCGG
AGCAGAAGGAACTTCTCTCCCAGGCTGAGCAACGCCTCGATGTACGTTCT
TCATGGTCTAGGCAATGCATGGTCCTTGGGGTTGTTAGAGCAAGCTTTCT
AGACCAT

BO11755.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-RB 1026 CG9018-PB 1..1023 17..1039 5115 100 Plus
CG9018-RA 1128 CG9018-PA 1..976 17..992 4880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-RB 1283 CG9018-RB 125..1148 16..1039 5120 100 Plus
CG9018-RA 1395 CG9018-RA 125..1101 16..992 4885 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:35:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2236047..2236730 850..167 3420 100 Minus
3L 28110227 3L 2235781..2235974 1039..846 970 100 Minus
3L 28110227 3L 2236801..2236952 167..16 760 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:35:24 has no hits.

BO11755.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:39 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 1..1026 17..1043 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:04:43 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 114..1149 9..1044 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:56 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 126..1148 17..1041 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:39 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 114..1149 9..1044 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:36 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
CG9018-RB 126..1148 17..1041 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:36 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2235779..2235972 848..1041 98 <- Minus
3L 2236050..2236729 168..847 100 <- Minus
3L 2236801..2236951 17..167 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:56 Download gff for BO11755.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2235779..2235972 848..1041 98 <- Minus
arm_3L 2236050..2236729 168..847 100 <- Minus
arm_3L 2236801..2236951 17..167 100   Minus

BO11755.pep Sequence

Translation from 16 to 1057

> BO11755.pep
MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELEN
VPEPKKLTFMYLANDVIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDK
LLGSLGRILNIWLERGVYDPKTIADWRSRLHKEAPGSSSSSNGKTNGDSE
KPEKEKDHGGSGKPEKSERREKRKHEDRHSKSKRSRHHVQGSSANSAPPT
EEVVSVEPENGHTPPYLPLGEPPEPEELIRALTSIENSASSDAVVRERIA
KLPQEISEISCISKLEDKDKAKELAIQVNEAVDLLNDYNARLAAEMEERS
KLATMLRDFQAEQKELLSQAEQRLDVRSSWSRQCMVLGVVRASFLDH

BO11755.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG9018-PB 341 CG9018-PB 1..341 1..341 1746 100 Plus
CG9018-PA 375 CG9018-PA 1..325 1..325 1663 100 Plus
CG15160-PB 818 CG15160-PB 5..135 4..138 172 29.6 Plus
CG15160-PA 822 CG15160-PA 5..135 4..138 172 29.6 Plus
CG15160-PC 834 CG15160-PC 5..135 4..138 172 29.6 Plus