Clone BO11757 Report

Search the DGRC for BO11757

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG31265-RA
Protein status:BO11757.pep: validated full length
Sequenced Size:832

Clone Sequence Records

BO11757.3prime Sequence

830 bp (794 high quality bases) assembled on 2006-04-19

> BO11757.3prime
ATGGTCTAGAAAGCTTGCGTAGTAGCATTTGTTGTTGCCACTGAGCTTGC
TGCGAATCCAGTCGAGGTAGTAGTACACATTGGCCTGCACATCGGGCAGT
CCGACACCGCATGGTCGTCCCCAATTGACCACACCCACCAATTGGCCATT
GCTCACCAGCGGACCACCGGAATCGCCGTGACAGGCGCCCTCACCCTCGC
GCGAAAAGGTGCAGATGTGACCCACACCCATGCTGCTGGTTCGGTTGAAG
GTCTCATAGCACTCATCCAGAGGAACAAGGCCCACGGTCAGCTTGTGCAG
GTCCTCCATGGAACTCCCGTAGGCCACATCGGAGCCCCAGCCCGTGAGGA
CGATCTCTTCGCCGAGTTGAACCGGTCTAGTTGGCAAAGCGATCGGCTGT
GTCAGCTCATTGAAGGTGATGTTCTCGGTAAGCTTCACCAGGGCGATGTC
GTTATGCATGTAAGGCTGGTCGTACATACAGTGTTTGTGGATCTCGGCGG
TGTAGTAGATCGCTCCGGGCTCTGCCCACTTATTGGTGCCCGTGATCACA
TTGACCAGGGCGGGAATGAAATTTTCCACGCAGTGTCCAGCAGTTATGAT
CCAGTTTTCGTTTAGGATGGCACCACCGCAATTATGGGAGCCCACTATGG
GTTGCAGGGACACCTGGTATGGAGCAAATCCGATCTCAGCCTCCTCGCCA
CCCTTTATCCTGCCAGATTGACCCGCAGGAAAGGGGCCAACTATGCGCTT
TGATTCACAGGGATTTGGGGGCTTCACCGCTAGGAGAATTAAAAGGCTTA
GACGGAGCAGCTTCATGTCGACTGATAACT

BO11757.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-PA 801 CG31265-RA 1..798 816..19 3990 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-RA 909 CG31265-RA 30..832 821..19 4000 99.9 Minus
CG31269-RB 937 CG31269-RB 599..717 226..108 235 79.8 Minus
CG4053-RB 925 CG4053-RB 634..755 222..101 205 78.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17128241..17129043 821..19 4000 99.9 Minus
3R 32079331 3R 17127724..17127842 226..108 235 79.8 Minus
3R 32079331 3R 17131444..17131565 101..222 205 77.9 Plus
Blast to na_te.dros performed on 2015-02-10 20:20:06 has no hits.

BO11757.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:53 Download gff for BO11757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-PA 1..801 15..816 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:14 Download gff for BO11757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-PA 1..801 15..816 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 20:37:22 Download gff for BO11757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 30..838 10..821 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:11:08 Download gff for BO11757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 30..838 10..821 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:11:08 Download gff for BO11757.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 17128241..17129049 10..821 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 20:37:22 Download gff for BO11757.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12953963..12954771 10..821 99   Minus

BO11757.5prime Sequence

830 bp (829 high quality bases) assembled on 2006-04-19

> BO11757.5prime
GAAGTTATCAGTCGACATGAAGCTGCTCCGTCTAAGCCTTTTAATTCTCC
TAGCGGTGAAGCCCCCAAATCCCTGTGAATCAAAGCGCATAGTTGGCCCC
TTTCCTGCGGGTCAATCTGGCAGGATAAAGGGTGGCGAGGAGGCTGAGAT
CGGATTTGCTCCATACCAGGTGTCCCTGCAACCCATAGTGGGCTCCCATA
ATTGCGGTGGTGCCATCCTAAACGAAAACTGGATCATAACTGCTGGACAC
TGCGTGGAAAATTTCATTCCCGCCCTGGTCAATGTGATCACGGGCACCAA
TAAGTGGGCAGAGCCCGGAGCGATCTACTACACCGCCGAGATCCACAAAC
ACTGTATGTACGACCAGCCTTACATGCATAACGACATCGCCCTGGTGAAG
CTTACCGAGAACATCACCTTCAATGAGCTGACACAGCCGATCGCTTTGCC
AACTAGACCGGTTCAACTCGGCGAAGAGATCGTCCTCACGGGCTGGGGCT
CCGATGTGGCCTACGGGAGTTCCATGGAGGACCTGCACAAGCTGACCGTG
GGCCTTGTTCCTCTGGATGAGTGCTATGAGACCTTCAACCGAACCAGCAG
CATGGGTGTGGGTCACATCTGCACCTTTTCGCGCGAGGGTGAGGGCGCCT
GTCACGGCGATTCCGGTGGTCCGCTGGTGAGCAATGGCCAATTGGTGGGT
GTGGTCAATTGGGGACGACCATGCGGTGTCGGACTGCCCGATGTGCAGGC
CAATGTGTACTACTACCTCGACTGGATTCGCAGCAAGCTCAGTGGCAACA
ACAAATGCTACTACGCAAGCTTTCTAGACC

BO11757.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-PA 801 CG31265-RA 1..798 17..814 3990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:17:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-RA 909 CG31265-RA 30..832 12..814 4000 99.9 Plus
CG31269-RB 937 CG31269-RB 599..717 607..725 235 79.8 Plus
CG4053-RB 925 CG4053-RB 634..755 611..732 205 78.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17128241..17129043 12..814 4000 99.9 Plus
3R 32079331 3R 17127724..17127842 607..725 235 79.8 Plus
3R 32079331 3R 17131444..17131565 732..611 205 77.9 Minus
Blast to na_te.dros performed on 2015-02-11 15:17:52 has no hits.

BO11757.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:15:54 Download gff for BO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-PA 1..801 17..818 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:15 Download gff for BO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-PA 1..801 17..818 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:20:27 Download gff for BO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 30..838 12..823 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:10:59 Download gff for BO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 30..838 12..823 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:10:59 Download gff for BO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17128241..17129049 12..823 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:20:27 Download gff for BO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12953963..12954771 12..823 99   Plus

BO11757.complete Sequence

832 bp assembled on 2006-10-11

GenBank Submission: FJ632183

> BO11757.complete
GAAGTTATCAGTCGACATGAAGCTGCTCCGTCTAAGCCTTTTAATTCTCC
TAGCGGTGAAGCCCCCAAATCCCTGTGAATCAAAGCGCATAGTTGGCCCC
TTTCCTGCGGGTCAATCTGGCAGGATAAAGGGTGGCGAGGAGGCTGAGAT
CGGATTTGCTCCATACCAGGTGTCCCTGCAACCCATAGTGGGCTCCCATA
ATTGCGGTGGTGCCATCCTAAACGAAAACTGGATCATAACTGCTGGACAC
TGCGTGGAAAATTTCATTCCCGCCCTGGTCAATGTGATCACGGGCACCAA
TAAGTGGGCAGAGCCCGGAGCGATCTACTACACCGCCGAGATCCACAAAC
ACTGTATGTACGACCAGCCTTACATGCATAACGACATCGCCCTGGTGAAG
CTTACCGAGAACATCACCTTCAATGAGCTGACACAGCCGATCGCTTTGCC
AACTAGACCGGTTCAACTCGGCGAAGAGATCGTCCTCACGGGCTGGGGCT
CCGATGTGGCCTACGGGAGTTCCATGGAGGACCTGCACAAGCTGACCGTG
GGCCTTGTTCCTCTGGATGAGTGCTATGAGACCTTCAACCGAACCAGCAG
CATGGGTGTGGGTCACATCTGCACCTTTTCGCGCGAGGGTGAGGGCGCCT
GTCACGGCGATTCCGGTGGTCCGCTGGTGAGCAATGGCCAATTGGTGGGT
GTGGTCAATTGGGGACGACCATGCGGTGTCGGACTGCCCGATGTGCAGGC
CAATGTGTACTACTACCTCGACTGGATTCGCAGCAAGCTCAGTGGCAACA
ACAAATGCTACTACGCAAGCTTTCTAGACCAT

BO11757.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-RA 801 CG31265-PA 1..798 17..814 3990 100 Plus
CG31269-RB 822 CG31269-PB 594..712 607..725 235 79.8 Plus
CG4053-RB 798 CG4053-PB 592..713 611..732 205 77.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-RA 909 CG31265-RA 30..832 12..814 4000 99.9 Plus
CG31269-RB 937 CG31269-RB 599..717 607..725 235 79.8 Plus
CG4053-RB 925 CG4053-RB 634..755 611..732 205 77.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17128241..17129043 12..814 4000 99.9 Plus
3R 32079331 3R 17127724..17127842 607..725 235 79.8 Plus
3R 32079331 3R 17131444..17131565 732..611 205 77.9 Minus
Blast to na_te.dros performed on 2014-11-27 13:51:26 has no hits.

BO11757.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:12:51 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 1..801 17..818 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:01:52 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 18..826 12..823 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:55:22 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 35..832 17..816 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:12:51 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 18..826 12..823 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:01 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
CG31265-RA 35..832 17..816 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:01 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17128246..17129043 17..816 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:55:22 Download gff for BO11757.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12953968..12954765 17..816 99   Plus

BO11757.pep Sequence

Translation from 16 to 832

> BO11757.pep
MKLLRLSLLILLAVKPPNPCESKRIVGPFPAGQSGRIKGGEEAEIGFAPY
QVSLQPIVGSHNCGGAILNENWIITAGHCVENFIPALVNVITGTNKWAEP
GAIYYTAEIHKHCMYDQPYMHNDIALVKLTENITFNELTQPIALPTRPVQ
LGEEIVLTGWGSDVAYGSSMEDLHKLTVGLVPLDECYETFNRTSSMGVGH
ICTFSREGEGACHGDSGGPLVSNGQLVGVVNWGRPCGVGLPDVQANVYYY
LDWIRSKLSGNNKCYYASFLDH

BO11757.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31265-PA 266 CG31265-PA 1..266 1..266 1444 100 Plus
CG31269-PB 273 CG31269-PB 6..265 8..264 763 57.9 Plus
CG17475-PB 288 CG17475-PB 49..285 36..269 633 48.9 Plus
CG17475-PA 288 CG17475-PA 49..285 36..269 633 48.9 Plus
CG17477-PA 267 CG17477-PA 27..257 37..264 598 49.4 Plus