Clone BO11767 Report

Search the DGRC for BO11767

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG13995-RA
Protein status:BO11767.pep: validated full length
Sequenced Size:1669

Clone Sequence Records

BO11767.3prime Sequence

846 bp (781 high quality bases) assembled on 2006-04-19

> BO11767.3prime
ATGGTCTAGAAAGCTTGCGTAGAGATAATGCGAAGAGGCCTGAGCTCTAT
ACTGTTTCGGTGTTAGCTTGATCAGCTTGGGGTTGAATGCCCCCAGTGCC
GCCTCGTTGGTGGACGAGGGAGGCGGCGGGGCGGTGTGCGTCCGGAAGCG
CGACCTCAGGAAGTTCTGCATGGAGCGCAGGCGGATGATGGGCGCGCAGG
GAGATTGTCGAAGCGAATTGTGGTTGAGCGCCCAGTAGATCACCGGACTG
ATGGCCGAGTAGAAGTAGCCTAGCAGAAGGCTGAAGTAAACAGAGGTCTG
GCTGCACTGCTGATTGTTGCCGAAGTTCTTGTAGAAGATGCAGAAGACGT
GCGGTGCCCAGCAGGCAATGAAGATCACGGCCGAGGCGATGAGCATGTTA
GCCAGGTGCCTTCGCGACCGCAGCGTGGAGGTTTGGGGCAGTGGGATGCC
GGGTGTCGCTGGTCCCCTGCCTGCTCGGTTGATGCGCTGGCGCTGCGAGT
GGGCGCGAATCTCCCTCATGGCCCTGGGTGATATGGGATTGCTAGAGCGG
TAGGAGCCCGGTTCGAGGGCCGATCCGGCAGAGCCTGGCTGGCGCGGCTG
CAGTGTGTGAAGCTGTATGTCGCCCGGACTGACGGCCATGGGACCGCCAC
CGGTGCCCGTGCCGTTCCCGTTCGAGGTGTCGTCCGCCGTGGTGCCCCCA
CCACAGGCCGCTTGCTGGGCGTTGGGGCAGCCCGTCACAATGACCATGTG
GGTCTGGCGTCGCAGGATGGGAATGGGCAGCGGCAGCTCTCCATGGGCAG
CTCGAGCCGTTAGCGACAGGGCGCAAAGCTTGCGTCGGACGCCGTA

BO11767.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-PA 1638 CG13995-RA 808..1635 846..19 4115 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:23:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-RA 3379 CG13995-RA 1390..2217 846..19 4125 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:23:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6057925..6058248 846..523 1605 99.7 Minus
2L 23513712 2L 6058426..6058682 525..269 1285 100 Minus
2L 23513712 2L 6058755..6059007 271..19 1265 100 Minus
Blast to na_te.dros performed on 2015-02-11 12:23:32 has no hits.

BO11767.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:10 Download gff for BO11767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-PA 809..1638 18..845 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:39 Download gff for BO11767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-PA 809..1638 18..845 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 23:27:20 Download gff for BO11767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 1391..2217 19..845 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:41:16 Download gff for BO11767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 1391..2217 19..845 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:41:16 Download gff for BO11767.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6057926..6058247 524..845 99 -> Minus
2L 6058428..6058681 270..523 100 -> Minus
2L 6058757..6059007 19..269 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 23:27:20 Download gff for BO11767.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6057926..6058247 524..845 99 -> Minus
arm_2L 6058428..6058681 270..523 100 -> Minus
arm_2L 6058757..6059007 19..269 100   Minus

BO11767.5prime Sequence

950 bp (868 high quality bases) assembled on 2006-04-19

> BO11767.5prime
GAAGTTATCAGTCGACATGAACAGGGACAATCTGCAGCAGTGGTGGGAGA
ACTCGTATCGGCGCCAACATCCAGAGCCCACCGATGACCTCGGCCTGGAC
TCCGCGGAGCTGCATCTCGCCCTCCAGGAGCCCAACCAGCTGCCCGCGGA
CTACGACTATGGCAACTTTAGTCTAGGCAATCCGTATGACGTGGACTCAG
AGCACTCCATTTCCCCGCTGACGCTGCTCCTGCTCGCTGTTAGCTATGGC
CTGGTGGTTTTCGGCGGCGTCGTGGGCAACTCCACGCTCGTTCTGACCCT
CTGCTCCGCCTCTTCGGTGCGTTTGCGTAACCCGCTGCTGCTGGCCGTCT
GCATTGCCGATCTCCTGGTCACCGGCATCTCCGCTCCGGTCACGCTCCTC
AATCTCGCGATGAACCGGAGGACGCGATCGCTGCCCCTTGTGCTGTGCAA
GGTCATACACTACGTACAGGTCATGCCCGTTTCGGCCAGCACTATTTCGT
TTTTCATGCTCTCCCTTGACCGCTACGCCACAGTAAAGCATCCGCGATTG
GCGCAGCTTCGCCAGCGGCGCTACTTGCACGTCTCCCTGGCGCTGCTATC
CTGGCTCGCCTCTGCCGCCATCAGCACTCCCTTTCTGTTTGCCTACAAAA
TCATCGCCAAGTCGATGGTGGTCAAGGGCGGTGGGGCGGCGAACACCACG
CCAAACCCGGTCAGCATCAGCTGCACCTCCGACCTGGGCGCCAACGCCAT
GTTCATGTCCTTCATCATCTTCCACACCATCGCCGTGTTCGTGTTGCCTG
GCATTGGTGTGCTACTCAACCACTACGGCGTCCGACGCAAGCTCTGCGCC
CTGTCGCTAACGGCTCGAGCTGCCCATGGAGAGCTGCCGCTGCCCATTCC
ATCCTGCGACGCCGACCCACATGGCCATTGGGACGGCTGCCCCAACGCCC

BO11767.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-PA 1638 CG13995-RA 1..884 17..900 4420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 05:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-RA 3379 CG13995-RA 582..1519 16..950 4585 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 05:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6057053..6057508 16..471 2280 100 Plus
2L 23513712 2L 6057568..6058054 467..950 2255 99 Plus
Blast to na_te.dros performed on 2015-02-04 05:27:00 has no hits.

BO11767.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:11 Download gff for BO11767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-PA 1..937 17..950 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:40 Download gff for BO11767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-PA 1..937 17..950 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 07:13:14 Download gff for BO11767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 582..1519 16..950 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 06:45:20 Download gff for BO11767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 582..1519 16..950 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 06:45:20 Download gff for BO11767.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6057053..6057506 16..469 100 -> Plus
2L 6057571..6058054 470..950 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 07:13:14 Download gff for BO11767.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6057053..6057506 16..469 100 -> Plus
arm_2L 6057571..6058054 470..950 98   Plus

BO11767.complete Sequence

1669 bp assembled on 2007-06-22

GenBank Submission: FJ632188

> BO11767.complete
GAAGTTATCAGTCGACATGAACAGGGACAATCTGCAGCAGTGGTGGGAGA
ACTCGTATCGGCGCCAACATCCAGAGCCCACCGATGACCTCGGCCTGGAC
TCCGCGGAGCTGCATCTCGCCCTCCAGGAGCCCAACCAGCTGCCCGCGGA
CTACGACTATGGCAACTTTAGTCTAGGCAATCCGTATGACGTGGACTCAG
AGCACTCCATTTCCCCGCTGACGCTGCTCCTGCTCGCTGTTAGCTATGGC
CTGGTGGTTTTCGGCGGCGTCGTGGGCAACTCCACGCTCGTTCTGACCCT
CTGCTCCGCCTCTTCGGTGCGTTTGCGTAACCCGCTGCTGCTGGCCGTCT
GCATTGCCGATCTCCTGGTCACCGGCATCTCCGCTCCGGTCACGCTCCTC
AATCTCGCGATGAACCGGAGGACGCGATCGCTGCCCCTTGTGCTGTGCAA
GGTCATACACTACGTACAGGTCATGCCCGTTTCGGCCAGCACTATTTCGT
TTTTCATGCTCTCCCTTGACCGCTACGCCACAGTAAAGCATCCGCGATTG
GCGCAGCTTCGCCAGCGGCGCTACTTGCACGTCTCCCTGGCGCTGCTATC
CTGGCTCGCCTCTGCCGCCATCAGCACTCCCTTTCTGTTTGCCTACAAAA
TCATCGCCAAGTCGATGGTGGTCAAGGGCGGTGGGGCGGCGAACACCACG
CCAAACCCGGTCAGCATCAGCTGCACCTCCGACCTGGGCGCCAACGCCAT
GTTCATGTCCTTCATCATCTTCCACACCATCGCCGTGTTCGTGTTGCCTG
GCATTGGTGTGCTACTCAACCACTACGGCGTCCGACGCAAGCTCTGCGCC
CTGTCGCTAACGGCTCGAGCTGCCCATGGAGAGCTGCCGCTGCCCATTCC
CATCCTGCGACGCCAGACCCACATGGTCATTGTGACGGGCTGCCCCAACG
CCCAGCAAGCGGCCTGTGGTGGGGGCACCACGGCGGACGACACCTCGAAC
GGGAACGGCACGGGCACCGGTGGCGGTCCCATGGCCGTCAGTCCGGGCGA
CATACAGCTTCACACACTGCAGCCGCGCCAGCCAGGCTCTGCCGGATCGG
CCCTCGAACCGGGCTCCTACCGCTCTAGCAATCCCATATCACCCAGGGCC
ATGAGGGAGATTCGCGCCCACTCGCAGCGCCAGCGCATCAACCGAGCAGG
CAGGGGACCAGCGACACCCGGCATCCCACTGCCCCAAACCTCCACGCTGC
GGTCGCGAAGGCACCTGGCTAACATGCTCATCGCCTCGGCCGTGATCTTC
ATTGCCTGCTGGGCACCGCACGTCTTCTGCATCTTCTACAAGAACTTCGG
CAACAATCAGCAGTGCAGCCAGACCTCTGTTTACTTCAGCCTTCTGCTAG
GCTACTTCTACTCGGCCATCAGTCCGGTGATCTACTGGGCGCTCAACCAC
AATTCGCTTCGACAATCTCCCTGCGCGCCCATCATCCGCCTGCGCTCCAT
GCAGAACTTCCTGAGGTCGCGCTTCCGGACGCACACCGCCCCGCCGCCTC
CCTCGTCCACCAACGAGGCGGCACTGGGGGCATTCAACCCCAAGCTGATC
AAGCTAACACCGAAACAGTATAGAGCTCAGGCCTCTTCGCATTATCTCTA
CGCAAGCTTTCTAGACCAT

BO11767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-RA 1638 CG13995-PA 1..1635 17..1651 8175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-RA 3379 CG13995-RA 582..2217 16..1651 8180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6057568..6058248 467..1147 3405 100 Plus
2L 23513712 2L 6057053..6057508 16..471 2280 100 Plus
2L 23513712 2L 6058426..6058682 1145..1401 1285 100 Plus
2L 23513712 2L 6058755..6059007 1399..1651 1265 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:42:02 has no hits.

BO11767.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:08:30 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 1..1638 17..1652 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:25:13 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 577..2212 16..1651 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:15 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 583..2217 17..1653 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:08:30 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 577..2212 16..1651 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:38 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13995-RA 583..2217 17..1653 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:38 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6057054..6057506 17..469 100 -> Plus
2L 6057571..6058247 470..1146 100 -> Plus
2L 6058428..6058681 1147..1400 100 -> Plus
2L 6058757..6059007 1401..1653 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:15 Download gff for BO11767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6057054..6057506 17..469 100 -> Plus
arm_2L 6057571..6058247 470..1146 100 -> Plus
arm_2L 6058428..6058681 1147..1400 100 -> Plus
arm_2L 6058757..6059007 1401..1653 99   Plus

BO11767.pep Sequence

Translation from 16 to 1669

> BO11767.pep
MNRDNLQQWWENSYRRQHPEPTDDLGLDSAELHLALQEPNQLPADYDYGN
FSLGNPYDVDSEHSISPLTLLLLAVSYGLVVFGGVVGNSTLVLTLCSASS
VRLRNPLLLAVCIADLLVTGISAPVTLLNLAMNRRTRSLPLVLCKVIHYV
QVMPVSASTISFFMLSLDRYATVKHPRLAQLRQRRYLHVSLALLSWLASA
AISTPFLFAYKIIAKSMVVKGGGAANTTPNPVSISCTSDLGANAMFMSFI
IFHTIAVFVLPGIGVLLNHYGVRRKLCALSLTARAAHGELPLPIPILRRQ
THMVIVTGCPNAQQAACGGGTTADDTSNGNGTGTGGGPMAVSPGDIQLHT
LQPRQPGSAGSALEPGSYRSSNPISPRAMREIRAHSQRQRINRAGRGPAT
PGIPLPQTSTLRSRRHLANMLIASAVIFIACWAPHVFCIFYKNFGNNQQC
SQTSVYFSLLLGYFYSAISPVIYWALNHNSLRQSPCAPIIRLRSMQNFLR
SRFRTHTAPPPPSSTNEAALGAFNPKLIKLTPKQYRAQASSHYLYASFLD
H

BO11767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG13995-PA 545 CG13995-PA 1..545 1..545 2832 100 Plus
5-HT7-PB 564 CG12073-PB 154..547 62..513 193 22.8 Plus
5-HT7-PA 564 CG12073-PA 154..547 62..513 193 22.8 Plus
NPFR-PC 462 CG1147-PC 88..288 72..276 158 23.9 Plus
NPFR-PB 466 CG1147-PB 88..288 72..276 158 23.9 Plus