Clone BO11774 Report

Search the DGRC for BO11774

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG31810-RA
Protein status:BO11774.pep: validated full length
Sequenced Size:1006

Clone Sequence Records

BO11774.3prime Sequence

817 bp (774 high quality bases) assembled on 2006-04-19

> BO11774.3prime
ATGGTCTAGAAAGCTTGCAGAAAGTTTTTGGTTTTTCAGTCTGTGCTCCA
TGGCCTCGATTCTCATTCGTTTAAAGAGTTGGTATCCGAAGTAAGTACGA
ATATCCATGGGAGCCAACTTCATGAAGGCGTACTGTAATCCATGAACCCA
GAAACCGTTGGTCTCGCTCGTCTTTCCCAGTGTAAAGACTGCGGACCGGG
CATAGGAATAAGCGTTGGGGAAAAGCAGTCCTCCTTGCCTCACTTTATCG
GAATAGGAATTCATATTGGTGGCCACAAAGGCTGGCATAACCAACTGCAC
ATGGATATTGTGTTCGGCCACCTCATATTCTAAACCTTTAGTAAAATGGG
TAACGAACTTCTTGGTAGCCGCATAAGCAGTCAAATTGGGATGGGGCTGG
AGTTCGGAGGAGGATCCGAGGTTAACAATTGCTCCCTTTCGACGACTAAT
CATCTGGGGCAGGATCTTGCGGGTGAGCATGGTAACCGATCCCACGTTGA
CGGTGAGAAGGTCCCACAACATGTCCTCCGATACCTTGTCAAGGCTTTCC
GGGTCGTGAATCGTGCCCACATTGTTGACCAAAATTCCAACTTCGATTCC
ATTCAGTTCCTTTTCGATATGAGCGTACACCTCGCGTCCCTTTGCAAAGT
CCGCAACAATCCACTTGATTTTCACATTATATTGGCTCCCAATCTCGTTG
GTGACTGCAATCAGCTTTTCCTCTTTCCGCGAAACGAGCACCAGGTTAAG
ACCCTGACGAGCCAACTCCCTGGCATATTCCTTTCCGATTCCATCGGTCG
CACCGGTCACCCCTGCC

BO11774.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-PA 975 CG31810-RA 174..972 817..19 3970 99.8 Minus
CG31809-PA 702 CG31809-RA 139..699 579..19 2630 98.7 Minus
CG31809-PA 702 CG31809-RA 18..139 811..690 610 100 Minus
CG13284-PA 978 CG13284-RA 482..599 512..395 315 90.6 Minus
CG13284-PB 1020 CG13284-RB 524..641 512..395 315 90.6 Minus
CG13284-PA 978 CG13284-RA 792..846 202..148 200 94.5 Minus
CG13284-PB 1020 CG13284-RB 834..888 202..148 200 94.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-RA 1138 CG31810-RA 210..1008 817..19 3980 99.9 Minus
CG31809-RC 1186 CG31809-RC 259..1057 817..19 3875 99 Minus
CG31809-RB 1338 CG31809-RB 411..1209 817..19 3875 99 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16849395..16849841 133..579 2235 100 Plus
2L 23513712 2L 16853953..16854399 133..579 2235 100 Plus
2L 23513712 2L 16843528..16843896 148..516 810 81.3 Plus
2L 23513712 2L 16850149..16850279 681..811 625 98.5 Plus
2L 23513712 2L 16854707..16854837 681..811 625 98.5 Plus
2L 23513712 2L 16849148..16849268 19..139 605 100 Plus
2L 23513712 2L 16849984..16850095 579..690 560 100 Plus
2L 23513712 2L 16854542..16854653 579..690 560 100 Plus
2L 23513712 2L 16853749..16853869 19..139 500 94.2 Plus
2L 23513712 2L 16844678..16844800 689..811 285 82.1 Plus
2L 23513712 2L 16844509..16844618 579..688 250 81.8 Plus
2L 23513712 2L 16843306..16843400 44..138 205 81.1 Plus
Blast to na_te.dros performed on 2015-02-12 04:43:11 has no hits.

BO11774.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:24 Download gff for BO11774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-PA 174..975 18..817 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:58 Download gff for BO11774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-PA 174..975 18..817 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:28:16 Download gff for BO11774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 210..1014 11..817 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:00:48 Download gff for BO11774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 210..1014 11..817 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:00:48 Download gff for BO11774.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16849395..16849840 133..578 100 <- Plus
2L 16849984..16850094 579..689 100 <- Plus
2L 16850158..16850282 690..817 96   Plus
2L 16849142..16849261 11..132 96 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:28:16 Download gff for BO11774.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16849142..16849261 11..132 96 <- Plus
arm_2L 16849395..16849840 133..578 100 <- Plus
arm_2L 16849984..16850094 579..689 100 <- Plus
arm_2L 16850158..16850282 690..817 96   Plus

BO11774.5prime Sequence

860 bp (823 high quality bases) assembled on 2006-04-19

> BO11774.5prime
GAAGTTATCAGTCGACATGGCTCTTATTTTGCAAGTGATTTCTACAGGAA
TCTACATAGTGGGTTCTCTTAGCATCGTCGCTTATCTCTACGAAAACTTA
AAGTCCTTGTTCAGCATTATCAAGTCTGTTGTGGAACCGTTCTTCAGGCC
GAATTTGCCAAAGACTTTGGCGGAGAAATTCGGAAATTGGGCAGTGGTGA
CCGGTGCGACCGATGGAATCGGAAAGGAATATGCCAGGGAGTTGGCTCGT
CAGGGTCTTAACCTGGTGCTCGTTTCGCGGAAAGAGGAAAAGCTGATTGC
AGTCACCAACGAGATTGGGAGCCAATATAATGTGAAAATCAAGTGGATTG
TTGCGGACTTTGCAAAGGGACGCGAGGTGTACGCTCATATCGAAAAGGAA
CTGAATGGAATCGAAGTTGGAATTTTGGTCAACAATGTGGGCACGATTCA
CGACCCGGAAAGCCTTGACAAGGTATCGGAGGACATGTTGTGGGACCTTC
TCACCGTCAACGTGGGATCGGTTACCATGCTCACCCGCAAGATCCTGCCC
CAGATGATTAGTCGTCGAAAGGGAGCAATTGTTAACCTCGGATCCTCCTC
CGAACTCCAGCCCCATCCCAATTTGACTGCTTATGCGGCTACCAAGAAGT
TCGTTACCCATTTTACTAAAGGTTTAGAATATGAGGTGGCCGAACACAAT
ATCCATGTGCAGTTGGTTATGCCAGCCTTTGTGGCCACCAATATGAATTC
CTATTCCGATAAAGTGAGGCAAGGAGGACTGCTTTTCCCCAACGCTTATT
CCTATGCCCGGTCCGCAGTCTTTAACACTGGGAAAGACGAGCGAGACCAA
CCGGTTCTGG

BO11774.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-PA 975 CG31810-RA 1..808 17..824 4040 100 Plus
CG31809-PA 702 CG31809-RA 139..535 428..824 1985 100 Plus
CG31809-PA 702 CG31809-RA 17..139 195..317 615 100 Plus
CG13284-PA 978 CG13284-RA 482..599 495..612 315 90.6 Plus
CG13284-PB 1020 CG13284-RB 524..641 495..612 315 90.6 Plus
CG31810-PA 975 CG31810-RA 808..834 825..851 135 100 Plus
CG31809-PA 702 CG31809-RA 535..561 825..851 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:23:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-RA 1138 CG31810-RA 35..879 15..860 4175 99.6 Plus
CG31809-RC 1186 CG31809-RC 119..928 50..860 3955 99.3 Plus
CG31809-RB 1338 CG31809-RB 271..1080 50..860 3955 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16849410..16849841 860..428 2085 99.3 Minus
2L 23513712 2L 16853968..16854399 860..428 2085 99.3 Minus
2L 23513712 2L 16852155..16852334 194..15 900 100 Minus
2L 23513712 2L 16843528..16843896 860..491 735 80.5 Minus
2L 23513712 2L 16858300..16858444 194..50 680 97.9 Minus
2L 23513712 2L 16850149..16850282 326..193 640 98.5 Minus
2L 23513712 2L 16854707..16854840 326..193 640 98.5 Minus
2L 23513712 2L 16849984..16850095 428..317 560 100 Minus
2L 23513712 2L 16854542..16854653 428..317 560 100 Minus
2L 23513712 2L 16844678..16844803 318..193 300 82.5 Minus
2L 23513712 2L 16844509..16844618 428..319 250 81.8 Minus
Blast to na_te.dros performed on 2015-02-12 13:23:46 has no hits.

BO11774.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:25 Download gff for BO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-PA 1..843 17..860 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:43:59 Download gff for BO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-PA 1..843 17..860 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:26:26 Download gff for BO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 29..879 10..860 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:09:08 Download gff for BO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 29..879 10..860 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:09:08 Download gff for BO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16849410..16849840 429..860 99 <- Minus
2L 16849984..16850094 318..428 100 <- Minus
2L 16850158..16850280 195..317 100 <- Minus
2L 16852155..16852340 10..194 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:26:26 Download gff for BO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16849410..16849840 429..860 99 <- Minus
arm_2L 16849984..16850094 318..428 100 <- Minus
arm_2L 16850158..16850280 195..317 100 <- Minus
arm_2L 16852155..16852340 10..194 98   Minus

BO11774.complete Sequence

1006 bp assembled on 2006-10-11

GenBank Submission: FJ632192

> BO11774.complete
GAAGTTATCAGTCGACATGGCTCTTATTTTGCAAGTGATTTCTACAGGAA
TCTACATAGTGGGTTCTCTTAGCATCGTCGCTTATCTCTACGAAAACTTA
AAGTCCTTGTTCAGCATTATCAAGTCTGTTGTGGAACCGTTCTTCAGGCC
GAATTTGCCAAAGACTTTGGCGGAGAAATTCGGAAATTGGGCAGTGGTGA
CCGGTGCGACCGATGGAATCGGAAAGGAATATGCCAGGGAGTTGGCTCGT
CAGGGTCTTAACCTGGTGCTCGTTTCGCGGAAAGAGGAAAAGCTGATTGC
AGTCACCAACGAGATTGGGAGCCAATATAATGTGAAAATCAAGTGGATTG
TTGCGGACTTTGCAAAGGGACGCGAGGTGTACGCTCATATCGAAAAGGAA
CTGAATGGAATCGAAGTTGGAATTTTGGTCAACAATGTGGGCACGATTCA
CGACCCGGAAAGCCTTGACAAGGTATCGGAGGACATGTTGTGGGACCTTC
TCACCGTCAACGTGGGATCGGTTACCATGCTCACCCGCAAGATCCTGCCC
CAGATGATTAGTCGTCGAAAGGGAGCAATTGTTAACCTCGGATCCTCCTC
CGAACTCCAGCCCCATCCCAATTTGACTGCTTATGCGGCTACCAAGAAGT
TCGTTACCCATTTTACTAAAGGTTTAGAATATGAGGTGGCCGAACACAAT
ATCCATGTGCAGTTGGTTATGCCAGCCTTTGTGGCCACCAATATGAATTC
CTATTCCGATAAAGTGAGGCAAGGAGGACTGCTTTTCCCCAACGCTTATT
CCTATGCCCGGTCCGCAGTCTTTACACTGGGAAAGACGAGCGAGACCAAC
GGTTTCTGGGTTCATGGATTACAGTACGCCTTCATGAAGTTGGCTCCCAT
GGATATTCGTACTTACTTCGGATACCAACTCTTTAAACGAATGAGAATCG
AGGCCATGGAGCACAGACTGAAAAACCAAAAACTTTCTGCAAGCTTTCTA
GACCAT

BO11774.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:56:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-RA 975 CG31810-PA 1..972 17..988 4860 100 Plus
CG31809-RC 951 CG31809-PC 10..948 50..988 4545 98.9 Plus
CG31809-RB 951 CG31809-PB 10..948 50..988 4545 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:56:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-RA 1138 CG31810-RA 35..1008 15..988 4870 100 Plus
CG31809-RC 1186 CG31809-RC 119..1057 50..988 4545 98.9 Plus
CG31809-RB 1338 CG31809-RB 271..1209 50..988 4545 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16849395..16849841 874..428 2235 100 Minus
2L 23513712 2L 16853953..16854399 874..428 2235 100 Minus
2L 23513712 2L 16852155..16852334 194..15 900 100 Minus
2L 23513712 2L 16843528..16843896 859..491 810 81.3 Minus
2L 23513712 2L 16858300..16858444 194..50 680 97.9 Minus
2L 23513712 2L 16850149..16850282 326..193 640 98.5 Minus
2L 23513712 2L 16854707..16854840 326..193 640 98.5 Minus
2L 23513712 2L 16849148..16849268 988..868 605 100 Minus
2L 23513712 2L 16849984..16850095 428..317 560 100 Minus
2L 23513712 2L 16854542..16854653 428..317 560 100 Minus
2L 23513712 2L 16853749..16853869 988..868 500 94.2 Minus
2L 23513712 2L 16844678..16844803 318..193 300 82.5 Minus
2L 23513712 2L 16844509..16844618 428..319 250 81.8 Minus
2L 23513712 2L 16843306..16843400 963..869 205 81.1 Minus
Blast to na_te.dros performed on 2014-11-27 19:56:42 has no hits.

BO11774.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:10:43 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 1..975 17..989 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:28:34 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 27..1012 10..996 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:44 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 37..1008 17..990 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:10:44 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 27..1012 10..996 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:19 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
CG31810-RA 37..1008 17..990 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:19 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16850158..16850280 195..317 100 <- Minus
2L 16852155..16852332 17..194 100   Minus
2L 16849146..16849261 875..990 98 <- Minus
2L 16849395..16849840 429..874 100 <- Minus
2L 16849984..16850094 318..428 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:44 Download gff for BO11774.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16849146..16849261 875..990 98 <- Minus
arm_2L 16849395..16849840 429..874 100 <- Minus
arm_2L 16849984..16850094 318..428 100 <- Minus
arm_2L 16850158..16850280 195..317 100 <- Minus
arm_2L 16852155..16852332 17..194 100   Minus

BO11774.pep Sequence

Translation from 16 to 1006

> BO11774.pep
MALILQVISTGIYIVGSLSIVAYLYENLKSLFSIIKSVVEPFFRPNLPKT
LAEKFGNWAVVTGATDGIGKEYARELARQGLNLVLVSRKEEKLIAVTNEI
GSQYNVKIKWIVADFAKGREVYAHIEKELNGIEVGILVNNVGTIHDPESL
DKVSEDMLWDLLTVNVGSVTMLTRKILPQMISRRKGAIVNLGSSSELQPH
PNLTAYAATKKFVTHFTKGLEYEVAEHNIHVQLVMPAFVATNMNSYSDKV
RQGGLLFPNAYSYARSAVFTLGKTSETNGFWVHGLQYAFMKLAPMDIRTY
FGYQLFKRMRIEAMEHRLKNQKLSASFLDH

BO11774.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:32:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG31810-PA 324 CG31810-PA 1..324 1..324 1648 100 Plus
CG31809-PC 316 CG31809-PC 4..316 12..324 1566 98.1 Plus
CG31809-PB 316 CG31809-PB 4..316 12..324 1566 98.1 Plus
CG13284-PE 325 CG13284-PE 1..325 1..324 1281 76.3 Plus
CG13284-PA 325 CG13284-PA 1..325 1..324 1281 76.3 Plus