Clone Sequence Records
BO11776.complete Sequence
4417 bp assembled on 2009-09-17
GenBank Submission: FJ632193
> BO11776.complete
GAAGTTATCAGTCGACATGGCGTTACTCTACCGACGCATGTCGATGCTAT
TAAATATAATTCTTGCATATATTTTCCTTTGTGCGATATGTGTGCAAGGA
TCTGTGAAACAAGAGTGGGCAGAAATAGGTAAAAACGTATCTCTAGAGTG
CGCATCTGAAAACGAAGCAGTAGCATGGAAGCTGGGCAACCAAACTATTA
ATAAAAACCATACAAGATATAAAATAAGAACTGAGCCATTGAAATCCAAC
GACGATGGCAGTGAAAACAACGATAGTCAAGACTTCATCAAGTATAAGAA
TGTCCTGGCGCTTCTCGATGTCAATATAAAGGACTCGGGGAACTACACAT
GCACAGCCCAAACGGGGCAAAACCATTCGACTGAATTCCAAGTTAGGCCA
TACCTTCCATCCAAAGTCCTGCAAAGTACCCCCGATAGGATTAAGAGAAA
AATCAAGCAGGATGTCATGTTGTACTGTTTGATCGAGATGTACCCACAAA
ATGAGACAACTAATAGAAACCTCAAGTGGCTTAAGGACGGCAGCCAGTTT
GAATTCCTGGACACCTTCTCGTCCATTTCGAAGCTAAACGATACGCACTT
AAACTTCACCCTGGAATTCACAGAAGTTTACAAGAAAGAGAATGGCACCT
ACAAGTGCACCGTCTTCGATGACACCGGACTCGAAATTACCTCCAAAGAG
ATTACCCTTTTCGTAATGGAAGTGCCACAAGTTAGCATTGATTTCGCCAA
GGCAGTTGGTGCTAATAAAATATACCTAAATTGGACCGTTAACGACGGCA
ACGATCCAATTCAGAAGTTCTTCATCACTCTGCAGGAGGCTGGAACACCG
ACTTTTACTTATCATAAGGACTTTATTAACGGCAGCCATACATCGTATAT
TCTGGACCATTTCAAGCCGAACACAACCTATTTTTTAAGAATCGTGGGAA
AGAACTCGATTGGCAATGGCCAACCCACCCAGTATCCCCAGGGAATCACC
ACGCTTAGTTATGATCCCATATTTATACCAAAAGTCGAGACCACCGGCAG
CACGGCGTCCACGATAACGATTGGCTGGAATCCACCGCCGCCAGATCTCA
TTGATTATATACAATACTACGAACTGATTGTCTCCGAATCGGGCGAGGTG
CCCAAAGTGATCGAAGAGGCCATTTACCAGCAGAATTCTCGAAACTTGCC
ATACATGTTTGATAAGCTTAAGACCGCCACAGACTACGAATTTAGGGTAA
GGGCATGTAGTGATCTAACCAAGACTTGTGGACCATGGTCCGAAAACGTG
AACGGCACAACGATGGACGGCGTGGCAACAAAACCCACCAACTTGAGCAT
ACAGTGTCATCATGACAACGTCACGAGAGGCAACTCCATCGCCATTAACT
GGGACGTTCCCAAGACGCCAAACGGCAAGGTTGTGTCATATTTAATTCAC
TTGCTGGGCAATCCCATGAGCACAGTGGATAGAGAGATGTGGGGACCAAA
GATTCGAAGAATCGATGAACCCCATCACAAGACCCTCTACGAAAGTGTTA
GCCCGAACACAAACTACACGGTGACGGTGTCTGCCATAACGCGGCACAAG
AAGAACGGCGAACCGGCCACCGGAAGTTGTCTAATGCCCGTCTCCACGCC
GGATGCCATTGGCCGTACCATGTGGTCAAAGGTGAACCTGGACTCCAAGT
ACGTTCTCAAGTTGTATCTACCGAAGATCAGCGAACGCAATGGGCCCATA
TGCTGCTATAGATTGTATCTAGTTAGAATTAACAATGACAACAAGGAATT
GCCGGACCCGGAGAAGCTAAACATCGCCACATATCAGGAGGTTCACAGCG
ATAACGTGACTAGAAGTAGTGCATATATAGCGGAAATGATAAGTAGCAAG
TACTTTAGGCCGGAAATATTCTTGGGCGATGAAAAGAGATTTAGTGAGAA
CAACGATATAATCCGCGACAACGACGAAATTTGTCGGAAATGCTTGGAGG
GTACTCCATTTCTGAGGAAACCCGAGATCATTCACATACCCCCACAAGGT
TCACTATCAAATTCCGATTCTGAACTGCCCATTTTGTCGGAGAAGGACAA
CTTGATCAAAGGAGCAAACTTAACAGAGCATGCTCTGAAAATCTTAGAAA
GTAAGTTAAGGGATAAAAGAAACGCGGTGACCAGCGATGAGAATCCAATT
CTAAGCGCCGTCAACCCAAATGTGCCACTCCACGATTCTAGTCGAGATGT
CTTCGATGGTGAGATAGATATTAACTCCAACTACACCGGATTCCTAGAGA
TAATAGTTCGGGATCGAAACAATGCCCTGATGGCTTATAGCAAATACTTT
GATATAATTACTCCGGCGACTGAAGCTGAACCCATCCAATCCTTGAACAA
TATGGACTACTACCTAAGCATTGGGGTCAAGGCTGGAGCCGTATTACTTG
GTGTCATACTTGTATTTATTGTGCTGTGGGTTTTCCATCACAAGAAAACC
AAGAATGAACTGCAGGGCGAAGACACTTTAACACTAAGAGATTCTTTGAG
GGCATTGTTCGGTCGACGAAATCACAACCACAGTCATTTTATAACTTCCG
GAAATCACAAAGGATTCGACGCTGGCCCCATTCACAGATTAGATTTAGAA
AACGCCTACAAGAACCGACATAAGGACACTGACTACGGATTTCTGCGGGA
ATATGAGATGCTGCCAAATCGCTTTAGCGATCGGACAACTAAAAACAGTG
ATTTAAAGGAGAACGCCTGCAAGAACAGGTATCCCGATATAAAGGCTTAC
GATCAGACGCGCGTAAAGTTGGCTGTCATCAATGGCCTGCAAACTACGGA
CTACATCAATGCTAACTTCGTAATTGGCTACAAGGAGAGAAAGAAGTTTA
TCTGTGCACAGGGTCCAATGGAAAGTACCATCGATGATTTTTGGCGAATG
ATTTGGGAACAACATCTAGAAATAATTGTGATGCTTACAAATTTGGAGGA
ATATAACAAGGCCAAGTGCGCGAAATATTGGCCAGAAAAAGTATTTGATA
CGAAACAGTTCGGAGATATTTTAGTGAAATTTGCACAAGAACGTAAGACT
GGTGATTATATTGAACGTACCCTGAACGTTTCCAAGAACAAAGCCAATGT
CGGCGAGGAGGAGGACCGTAGACAAATCACCCAATACCACTACCTAACGT
GGAAGGACTTCATGGCACCAGAGCATCCACATGGCATCATCAAATTCATA
CGTCAAATCAATTCCGTCTACTCCCTGCAAAGGGGTCCAATTTTAGTGCA
TTGCAGTGCTGGTGTGGGTAGAACCGGAACCCTGGTGGCTTTAGATTCCC
TAATCCAACAGCTGGAGGAAGAAGACTCGGTGTCCATTTACAACACAGTG
TGTGATCTACGACACCAACGAAATTTTTTAGTCCAATCTCTGAAACAATA
CATCTTTCTTTACCGGGCTTTATTAGATACTGGAACCTTTGGAAACACGG
ATATTTGCATTGATACAATGGCTTCTGCAATTGAATCTCTTAAGCGGAAA
CCCAACGAGGGTAAATGCAAATTGGAAGTGGAATTCGAGAAACTACTGGC
CACAGCAGATGAGATAAGTAAATCATGTAGTGTGGGCGAAAACGAGGAGA
ACAATATGAAGAACAGAAGTCAAGAGATTATACCCTACGATCGCAACAGA
GTTATACTAACACCACTTCCGATGCGGGAAAACTCAACTTACATTAACGC
ATCATTCATAGAGGGCTATGATAATAGCGAAACCTTCATCATTGCCCAGG
ATCCACTTGAAAACACTATAGGAGACTTCTGGCGAATGATCTCGGAACAG
AGTGTTACCACCCTCGTCATGATATCCGAAATCGGAGATGGTCCCAGGAA
ATGCCCGCGATACTGGGCAGATGATGAGGTTCAATACGATCACATACTCG
TGAAATACGTGCACAGCGAAAGTTGTCCATACTATACTCGCCGCGAATTT
TATGTTACGAATTGCAAAATAGACGATACGCTGAAAGTCACACAATTTCA
ATACAATGGTTGGCCCACCGTGGACGGAGAAGTTCCTGAAGTCTGCCGTG
GCATTATAGAACTTGTAGATCAAGCATACAACCATTATAAGAACAACAAG
AATTCTGGTTGTCGATCTCCACTCACAGTTCATTGCAGCCTGGGAACCGA
TCGAAGTTCCATTTTCGTCGCCATGTGTATTTTGGTCCAGCATCTGAGGC
TGGAGAAGTGTGTCGACATCTGTGCCACAACAAGGAAATTACGATCTCAG
CGAACGGGACTTATCAACTCATACGCACAATACGAGTTCCTACATCGCGC
AATAATTAATTATTCAGACTTACATCACATAGCCGAGTCAACATTGGATG
CAAGCTTTCTAGACCAT
BO11776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:38:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-RB | 4386 | CG10975-PB | 1..4383 | 17..4399 | 21915 | 100 | Plus |
| Ptp69D-RA | 4389 | CG10975-PA | 1..4386 | 17..4399 | 21850 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-RB | 5165 | CG10975-RB | 208..4591 | 16..4399 | 21920 | 100 | Plus |
| Ptp69D-RA | 5168 | CG10975-RA | 208..4594 | 16..4399 | 21855 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12736251..12738096 | 215..2060 | 9230 | 100 | Plus |
| 3L | 28110227 | 3L | 12738773..12739666 | 2549..3442 | 4470 | 100 | Plus |
| 3L | 28110227 | 3L | 12740353..12740660 | 3881..4188 | 1540 | 100 | Plus |
| 3L | 28110227 | 3L | 12738458..12738704 | 2305..2551 | 1235 | 100 | Plus |
| 3L | 28110227 | 3L | 12738156..12738401 | 2061..2306 | 1230 | 100 | Plus |
| 3L | 28110227 | 3L | 12740109..12740288 | 3701..3880 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 12739725..12739872 | 3442..3589 | 740 | 100 | Plus |
| 3L | 28110227 | 3L | 12740716..12740858 | 4183..4325 | 715 | 100 | Plus |
| 3L | 28110227 | 3L | 12739927..12740041 | 3588..3702 | 575 | 100 | Plus |
| 3L | 28110227 | 3L | 12736056..12736160 | 112..216 | 525 | 100 | Plus |
| 3L | 28110227 | 3L | 12735152..12735249 | 16..113 | 490 | 100 | Plus |
| 3L | 28110227 | 3L | 12740920..12740994 | 4325..4399 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:38:53 has no hits.
BO11776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-17 15:20:03 Download gff for
BO11776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RB | 205..4587 | 17..4401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:40 Download gff for
BO11776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RB | 209..4591 | 17..4401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:04 Download gff for
BO11776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RB | 205..4587 | 17..4401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:34 Download gff for
BO11776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RB | 209..4591 | 17..4401 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:34 Download gff for
BO11776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12738460..12738703 | 2307..2550 | 100 | -> | Plus |
| 3L | 12735153..12735249 | 17..113 | 100 | -> | Plus |
| 3L | 12736058..12736160 | 114..216 | 100 | -> | Plus |
| 3L | 12740920..12740994 | 4325..4401 | 97 | | Plus |
| 3L | 12736253..12738096 | 217..2060 | 100 | -> | Plus |
| 3L | 12738156..12738401 | 2061..2306 | 100 | -> | Plus |
| 3L | 12738775..12739666 | 2551..3442 | 100 | -> | Plus |
| 3L | 12739726..12739872 | 3443..3589 | 100 | -> | Plus |
| 3L | 12739929..12740039 | 3590..3700 | 100 | -> | Plus |
| 3L | 12740109..12740288 | 3701..3880 | 100 | -> | Plus |
| 3L | 12740353..12740660 | 3881..4188 | 100 | -> | Plus |
| 3L | 12740722..12740857 | 4189..4324 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:40 Download gff for
BO11776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12731256..12731501 | 2061..2306 | 100 | -> | Plus |
| arm_3L | 12731560..12731803 | 2307..2550 | 100 | -> | Plus |
| arm_3L | 12728253..12728349 | 17..113 | 100 | -> | Plus |
| arm_3L | 12729158..12729260 | 114..216 | 100 | -> | Plus |
| arm_3L | 12729353..12731196 | 217..2060 | 100 | -> | Plus |
| arm_3L | 12731875..12732766 | 2551..3442 | 100 | -> | Plus |
| arm_3L | 12732826..12732972 | 3443..3589 | 100 | -> | Plus |
| arm_3L | 12733029..12733139 | 3590..3700 | 100 | -> | Plus |
| arm_3L | 12733209..12733388 | 3701..3880 | 100 | -> | Plus |
| arm_3L | 12733453..12733760 | 3881..4188 | 100 | -> | Plus |
| arm_3L | 12733822..12733957 | 4189..4324 | 100 | -> | Plus |
| arm_3L | 12734020..12734094 | 4325..4401 | 97 | | Plus |
BO11776.3prime Sequence
690 bp (650 high quality bases) assembled on 2006-04-19
> BO11776.3prime
ATGGTCTAGAAAGCTTGCATCCAATGTTGACTCGGCTATGTGATGTAAGT
CTGAATAATTAATTATTGCGCGATGTAGGAACTCGTATTGTGCGTATGAG
TTGATAAGTCCCGTTCGCTGAGATCGTAATTTCCTTGTTGTGGCACAGAT
GTCGACACACTTCTCCAGCCTCAGATGCTGGACCAAAATACACATGGCGA
CGAAAATGGAACTTCGATCGGTTCCCAGGCTGCAATGAACTGTGAGTGGA
GATCGACAACCAGAATTCTTGTTGTTCTTATAATGGTTGTATGCTTGATC
TACAAGTTCTATAATGCCACGGCAGACTTCAGGAACTTCTCCGTCCACGG
TGGGCCAACCATTGTATTGAAATTGTGTGACTTTCAGCGTATCGTCTATT
TTGCAATTCGTAACATAAAATTCGCGGCGAGTATAGTATGGACAACTTTC
GCTGTGCACGTATTTCACGAGTATGTGATCGTATTGAACCTCATCATCTG
CCCAGTATCGCGGGCATTTCCTGGGACCATCTCCGATTTCGGATATCATG
ACGAGGGTGGTAACACTCTGTTCCGAGATCATTCGCCAGAAGTCTCCTAT
AGTGTTTTCAAGTGGATCCTGGGCAATGATGAAGGTTTCGCTATTATCAT
AGCCCTCTATGAATGATGCGTTAAATGTAAGTTGAGTTTT
BO11776.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10975-PA | 4389 | Ptp69D-RA | 3731..4386 | 674..19 | 3280 | 100 | Minus |
| CG10975-PB | 4386 | Ptp69D-RB | 3728..4383 | 674..19 | 3280 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 03:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-RB | 5165 | CG10975-RB | 3921..4591 | 690..19 | 3335 | 99.9 | Minus |
| Ptp69D-RA | 5168 | CG10975-RA | 3924..4594 | 690..19 | 3335 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 03:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12740353..12740660 | 537..230 | 1540 | 100 | Minus |
| 3L | 28110227 | 3L | 12740137..12740288 | 690..538 | 715 | 99.3 | Minus |
| 3L | 28110227 | 3L | 12740716..12740858 | 235..93 | 715 | 100 | Minus |
| 3L | 28110227 | 3L | 12740920..12740994 | 93..19 | 375 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 03:45:46 has no hits.
BO11776.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:28 Download gff for
BO11776.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10975-PB | 3713..4386 | 15..690 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:04 Download gff for
BO11776.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10975-PB | 3713..4386 | 15..690 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:58:04 Download gff for
BO11776.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 3924..4600 | 11..690 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:28:51 Download gff for
BO11776.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 3924..4600 | 11..690 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:28:51 Download gff for
BO11776.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12740920..12740997 | 15..93 | 97 | -> | Minus |
| 3L | 12740137..12740288 | 538..690 | 99 | -> | Minus |
| 3L | 12740353..12740660 | 230..537 | 100 | -> | Minus |
| 3L | 12740722..12740857 | 94..229 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:58:04 Download gff for
BO11776.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12733237..12733388 | 538..690 | 99 | -> | Minus |
| arm_3L | 12733453..12733760 | 230..537 | 100 | -> | Minus |
| arm_3L | 12733822..12733957 | 94..229 | 100 | -> | Minus |
| arm_3L | 12734020..12734097 | 15..93 | 97 | -> | Minus |
BO11776.5prime Sequence
794 bp (712 high quality bases) assembled on 2006-04-19
> BO11776.5prime
GAAGTTATCAGTCGACATGGCGTTACTCTACCGACGCATGTCGATGCTAT
TAAATATAATTCTTGCATATATTTTCCTTTGTGCGATATGTGTGCAAGGA
TCTGTGAAACAAGAGTGGGCAGAAATAGGTAAAAACGTATCTCTAGAGTG
CGCATCTGAAAACGAAGCAGTAGCATGGAAGCTGGGCAACCAAACTATTA
ATAAAAACCATACAAGATATAAAATAAGAACTGAGCCATTGAAATCCAAC
GACGATGGCAGTGAAAACAACGATAGTCAAGACTTCATCAAGTATAAGAA
TGTCCTGGCGCTTCTCGATGTCAATATAAAGGACTCGGGGAACTACACAT
GCACAGCCCAAACGGGGCAAAACCATTCGACTGAATTCCAAGTTAGGCCA
TACCTTCCATCCAAAGTCCTGCAAAGTACCCCCGATAGGATTAAGAGAAA
AATCAAGCAGGATGTCATGTTGTACTGTTTGATCGAGATGTACCCACAAA
ATGAGACAACTAATAGAAACCTCAAGTGGCTTAAGGACGGCAGCCAGTTT
GAATTCCTGGACACCTTCTCGTCCATTTCGAAGCTAAACGATACGCACTT
AAACTTCACCCTGGAATTCACAGAAGTTTACAAGAAAGAGAATGGCACCT
ACAAGTGCACCGTCTTCGATGACACCGGACTCGAAATTACCTCCAAAGAG
ATTACCCTTTTCGTAATGGAAGTGCCACAAGTTAGCATTGATTTCGCCAA
GGCAGGTGGTGCTAATAAAATATACCTAAATTGGACCGTTAACG
BO11776.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10975-PA | 4389 | Ptp69D-RA | 1..778 | 17..794 | 3865 | 99.8 | Plus |
| CG10975-PB | 4386 | Ptp69D-RB | 1..778 | 17..794 | 3865 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:21:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-RB | 5165 | CG10975-RB | 208..986 | 16..794 | 3880 | 99.9 | Plus |
| Ptp69D-RA | 5168 | CG10975-RA | 208..986 | 16..794 | 3880 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:21:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12736251..12736830 | 215..794 | 2885 | 99.8 | Plus |
| 3L | 28110227 | 3L | 12736056..12736160 | 112..216 | 525 | 100 | Plus |
| 3L | 28110227 | 3L | 12735152..12735249 | 16..113 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:21:53 has no hits.
BO11776.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:29 Download gff for
BO11776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10975-PB | 1..778 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:05 Download gff for
BO11776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10975-PB | 1..778 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:22:39 Download gff for
BO11776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 205..986 | 10..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:16:36 Download gff for
BO11776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 205..986 | 10..794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:16:36 Download gff for
BO11776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12735149..12735249 | 10..113 | 97 | -> | Plus |
| 3L | 12736058..12736160 | 114..216 | 100 | -> | Plus |
| 3L | 12736253..12736830 | 217..794 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:22:39 Download gff for
BO11776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12728249..12728349 | 10..113 | 97 | -> | Plus |
| arm_3L | 12729158..12729260 | 114..216 | 100 | -> | Plus |
| arm_3L | 12729353..12729930 | 217..794 | 99 | | Plus |
BO11776.pep Sequence
Translation from 16 to 4417
> BO11776.pep
MALLYRRMSMLLNIILAYIFLCAICVQGSVKQEWAEIGKNVSLECASENE
AVAWKLGNQTINKNHTRYKIRTEPLKSNDDGSENNDSQDFIKYKNVLALL
DVNIKDSGNYTCTAQTGQNHSTEFQVRPYLPSKVLQSTPDRIKRKIKQDV
MLYCLIEMYPQNETTNRNLKWLKDGSQFEFLDTFSSISKLNDTHLNFTLE
FTEVYKKENGTYKCTVFDDTGLEITSKEITLFVMEVPQVSIDFAKAVGAN
KIYLNWTVNDGNDPIQKFFITLQEAGTPTFTYHKDFINGSHTSYILDHFK
PNTTYFLRIVGKNSIGNGQPTQYPQGITTLSYDPIFIPKVETTGSTASTI
TIGWNPPPPDLIDYIQYYELIVSESGEVPKVIEEAIYQQNSRNLPYMFDK
LKTATDYEFRVRACSDLTKTCGPWSENVNGTTMDGVATKPTNLSIQCHHD
NVTRGNSIAINWDVPKTPNGKVVSYLIHLLGNPMSTVDREMWGPKIRRID
EPHHKTLYESVSPNTNYTVTVSAITRHKKNGEPATGSCLMPVSTPDAIGR
TMWSKVNLDSKYVLKLYLPKISERNGPICCYRLYLVRINNDNKELPDPEK
LNIATYQEVHSDNVTRSSAYIAEMISSKYFRPEIFLGDEKRFSENNDIIR
DNDEICRKCLEGTPFLRKPEIIHIPPQGSLSNSDSELPILSEKDNLIKGA
NLTEHALKILESKLRDKRNAVTSDENPILSAVNPNVPLHDSSRDVFDGEI
DINSNYTGFLEIIVRDRNNALMAYSKYFDIITPATEAEPIQSLNNMDYYL
SIGVKAGAVLLGVILVFIVLWVFHHKKTKNELQGEDTLTLRDSLRALFGR
RNHNHSHFITSGNHKGFDAGPIHRLDLENAYKNRHKDTDYGFLREYEMLP
NRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKLAVINGLQTTDYINAN
FVIGYKERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNKAK
CAKYWPEKVFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEED
RRQITQYHYLTWKDFMAPEHPHGIIKFIRQINSVYSLQRGPILVHCSAGV
GRTGTLVALDSLIQQLEEEDSVSIYNTVCDLRHQRNFLVQSLKQYIFLYR
ALLDTGTFGNTDICIDTMASAIESLKRKPNEGKCKLEVEFEKLLATADEI
SKSCSVGENEENNMKNRSQEIIPYDRNRVILTPLPMRENSTYINASFIEG
YDNSETFIIAQDPLENTIGDFWRMISEQSVTTLVMISEIGDGPRKCPRYW
ADDEVQYDHILVKYVHSESCPYYTRREFYVTNCKIDDTLKVTQFQYNGWP
TVDGEVPEVCRGIIELVDQAYNHYKNNKNSGCRSPLTVHCSLGTDRSSIF
VAMCILVQHLRLEKCVDICATTRKLRSQRTGLINSYAQYEFLHRAIINYS
DLHHIAESTLDASFLDH
BO11776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:58:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-PB | 1461 | CG10975-PB | 1..1461 | 1..1461 | 7748 | 100 | Plus |
| Ptp69D-PA | 1462 | CG10975-PA | 1..1462 | 1..1461 | 7736 | 99.9 | Plus |
| Lar-PD | 1912 | CG10443-PD | 1336..1903 | 871..1449 | 986 | 35.7 | Plus |
| Lar-PH | 1927 | CG10443-PH | 1351..1918 | 871..1449 | 986 | 35.7 | Plus |
| Lar-PG | 1935 | CG10443-PG | 1359..1926 | 871..1449 | 986 | 35.7 | Plus |
