Clone BO11789 Report

Search the DGRC for BO11789

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptUgt58Fa-RA
Protein status:BO11789.pep: validated full length
Sequenced Size:1621

Clone Sequence Records

BO11789.3prime Sequence

908 bp (893 high quality bases) assembled on 2006-04-19

> BO11789.3prime
ATGGTCTAGAAAGCTTGCATTTACTTTGGTCGACTTGGAGTTGTTTTTCT
TATTCCAAATATAAAAGCCGCCAAAACTCAGGGCCACCAGTAAGCTTACG
ACTAAAGTAGCTATTCCGGCATAGAACACGAAGAGGTCGAACAGGTGCAG
CTGGCAGGAGGAGATCCCAATGCCTCGGGTTCTCAAAGCCGATCCTCCCT
TGTGCCGGGCCACATAGTTCACCCAGAAGAGAGCGCTGGCCAGAGCGCCA
AGAGGACGGTCCCTGAACTCCAGAGACACATCCCGGATGGTCAACTGGAA
GTGTGACTCGAGGAGTAGCCTGTCCACTGCCCAGTTTAGTGACTCAGTTG
TCACATTGCCCTCCTCCAGCTGTAGGCCAACTCCTAATCGCACGGCTAGC
TCCATGTTCCGAGCTTCATGCTGGAATAGGGGCAATCCCAGAATGGGCAC
ATTCCGCATGATGCCCTCCTGCAGGTTGAGCAGATCTCCATTGGTTAGGA
AAGCCTTGACTCTCGGATGCGCCAGGATGTCTATCTGCGGCACTGCATGC
TGGATCATCACATTCTTTGGCAGTCCCTCCAGGGTCTTGACGTCGTGACA
GGTCCAGATTATGCTCTGCTTTCTGGCGGAGAAGAAGGCAAACAGAGTGT
CGAGTTTCTCCTTGGGTAGCTGGCCACAAGCCTGCTCATTGCCCAGTTGA
ACGTAGATGGCTCCAGGACGCGCCTCCTCCAGAAAGCGCTTCACATTCCA
GGGCAGCTCCTTGGGACCACGGATGTGAAGTCCACCGGCGGGAATTATCT
GTTGGATACTAACTTTGGGAGTTATCAATGGCACATGACTATTGAGCAGC
AGCACGGATAGCTGGCTGGCCTGCAGCTCGGGGATAGAGCTCTGCAGCTG
GGAGTACT

BO11789.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4414-PA 1590 Ugt58Fa-RA 698..1587 908..19 4425 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 17:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1864 CG4414-RB 808..1697 908..19 4435 99.9 Minus
Ugt58Fa-RA 1742 CG4414-RA 808..1697 908..19 4435 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 17:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22641953..22642842 19..908 4435 99.9 Plus
Blast to na_te.dros performed on 2015-02-03 17:34:40 has no hits.

BO11789.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:54 Download gff for BO11789.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 698..1590 18..908 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:41 Download gff for BO11789.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 698..1590 18..908 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:36:10 Download gff for BO11789.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 808..1704 10..908 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 19:02:54 Download gff for BO11789.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 808..1704 10..908 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 19:02:54 Download gff for BO11789.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22641946..22642842 10..908 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:36:10 Download gff for BO11789.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18529451..18530347 10..908 99   Plus

BO11789.5prime Sequence

876 bp (821 high quality bases) assembled on 2006-04-19

> BO11789.5prime
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAGGAGCTGCCCTGGAAT

BO11789.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG4414-PA 1590 Ugt58Fa-RA 1..844 17..860 4220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:23:06
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1864 CG4414-RB 111..971 17..876 4280 99.9 Plus
Ugt58Fa-RA 1742 CG4414-RA 111..971 17..876 4280 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22642679..22643286 876..270 2990 99.8 Minus
2R 25286936 2R 22643492..22643654 181..19 815 100 Minus
2R 25286936 2R 22643343..22643430 269..182 440 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:23:02 has no hits.

BO11789.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:54 Download gff for BO11789.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 1..861 17..876 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:43 Download gff for BO11789.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 1..861 17..876 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:38:57 Download gff for BO11789.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 104..971 10..876 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:10:02 Download gff for BO11789.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 104..971 10..876 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:10:02 Download gff for BO11789.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22642679..22643286 270..876 99 <- Minus
2R 22643343..22643430 182..269 100 <- Minus
2R 22643492..22643654 19..181 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:38:57 Download gff for BO11789.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18530997..18531159 19..181 100   Minus
arm_2R 18530184..18530791 270..876 99 <- Minus
arm_2R 18530848..18530935 182..269 100 <- Minus

BO11789.complete Sequence

1621 bp assembled on 2006-10-11

GenBank Submission: FJ632197

> BO11789.complete
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAAGGAGCTGCCCTGGAATGTGAAGCGCTTTCTGGAGGAGGC
GCGTCCTGGAGCCATCTACGTTCAACTGGGCAATGAGCAGGCTTGTGGCC
AGCTACCCAAGGAGAAACTCGACACTCTGTTTGCCTTCTTCTCCGCCAGA
AAGCAGAGCATAATCTGGACCTGTCACGACGTCAAGACCCTGGAGGGACT
GCCAAAGAATGTGATGATCCAGCATGCAGTGCCGCAGATAGACATCCTGG
CGCATCCGAGAGTCAAGGCTTTCCTAACCAATGGAGATCTGCTCAACCTG
CAGGAGGGCATCATGCGGAATGTGCCCATTCTGGGATTGCCCCTATTCCA
GCATGAAGCTCGGAACATGGAGCTAGCCGTGCGATTAGGAGTTGGCCTAC
AGCTGGAGGAGGGCAATGTGACAACTGAGTCACTAAACTGGGCAGTGGAC
AGGCTACTCCTCGAGTCACACTTCCAGTTGACCATCCGGGATGTGTCTCT
GGAGTTCAGGGACCGTCCTCTTGGCGCTCTGGCCAGCGCTCTCTTCTGGG
TGAACTATGTGGCCCGGCACAAGGGAGGATCGGCTTTGAGAACCCGAGGC
ATTGGGATCTCCTCCTGCCAGCTGCACCTGTTCGACCTCTTCGTGTTCTA
TGCCGGAATAGCTACTTTAGTCGTAAGCTTACTGGTGGCCCTGAGTTTTG
GCGGCTTTTATATTTGGAATAAGAAAAACAACTCCAAGTCGACCAAAGTA
AATGCAAGCTTTCTAGACCAT

BO11789.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1590 CG4414-PB 1..1587 17..1603 7935 100 Plus
Ugt58Fa-RA 1590 CG4414-PA 1..1587 17..1603 7935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1864 CG4414-RB 111..1697 17..1603 7935 100 Plus
Ugt58Fa-RA 1742 CG4414-RA 111..1697 17..1603 7935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22641953..22643286 1603..270 6670 100 Minus
2R 25286936 2R 22643492..22643654 181..19 815 100 Minus
2R 25286936 2R 22643343..22643430 269..182 440 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:08:19 has no hits.

BO11789.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:32 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 1..1590 17..1604 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:04:33 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 102..1702 10..1612 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:08 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 111..1697 17..1605 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:32 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 102..1702 10..1612 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:37 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 111..1697 17..1605 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:37 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22643492..22643655 17..181 99   Minus
2R 22641951..22643286 270..1605 99 <- Minus
2R 22643343..22643430 182..269 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:08 Download gff for BO11789.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18529456..18530791 270..1605 99 <- Minus
arm_2R 18530848..18530935 182..269 100 <- Minus
arm_2R 18530997..18531160 17..181 99   Minus

BO11789.pep Sequence

Translation from 16 to 1621

> BO11789.pep
MESQWNRWILLAILGLALGQISQAAKILVLFPHVNEGHFAVMRTLVTELA
NREHTIEVYTGHGLGESLDNVTETVTAEFPFWSELQKQAAPKGNLADLGL
LPIEKLRQSLASVGARALDHFLAQEPIQKLLKMSYLEFDFDVILVDYFYT
EALLALGALHQRPVVGIISTDFGNYMDAVQEALVPAACSPIDFERDQPEM
SFSVRLGNIRTCIARRKQFIKDHYGGQEQLVTKYFQLQSSIPELQASQLS
VLLLNSHVPLITPKVSIQQIIPAGGLHIRGPKELPWNVKRFLEEARPGAI
YVQLGNEQACGQLPKEKLDTLFAFFSARKQSIIWTCHDVKTLEGLPKNVM
IQHAVPQIDILAHPRVKAFLTNGDLLNLQEGIMRNVPILGLPLFQHEARN
MELAVRLGVGLQLEEGNVTTESLNWAVDRLLLESHFQLTIRDVSLEFRDR
PLGALASALFWVNYVARHKGGSALRTRGIGISSCQLHLFDLFVFYAGIAT
LVVSLLVALSFGGFYIWNKKNNSKSTKVNASFLDH

BO11789.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:15
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-PB 529 CG4414-PB 1..529 1..529 2713 100 Plus
Ugt58Fa-PA 529 CG4414-PA 1..529 1..529 2713 100 Plus
CG15661-PB 530 CG15661-PB 20..524 20..521 649 30.5 Plus
CG15661-PA 530 CG15661-PA 20..524 20..521 649 30.5 Plus
CG4302-PA 532 CG4302-PA 11..523 10..526 645 29.9 Plus