Clone Sequence Records
BO11789.3prime Sequence
908 bp (893 high quality bases) assembled on 2006-04-19
> BO11789.3prime
ATGGTCTAGAAAGCTTGCATTTACTTTGGTCGACTTGGAGTTGTTTTTCT
TATTCCAAATATAAAAGCCGCCAAAACTCAGGGCCACCAGTAAGCTTACG
ACTAAAGTAGCTATTCCGGCATAGAACACGAAGAGGTCGAACAGGTGCAG
CTGGCAGGAGGAGATCCCAATGCCTCGGGTTCTCAAAGCCGATCCTCCCT
TGTGCCGGGCCACATAGTTCACCCAGAAGAGAGCGCTGGCCAGAGCGCCA
AGAGGACGGTCCCTGAACTCCAGAGACACATCCCGGATGGTCAACTGGAA
GTGTGACTCGAGGAGTAGCCTGTCCACTGCCCAGTTTAGTGACTCAGTTG
TCACATTGCCCTCCTCCAGCTGTAGGCCAACTCCTAATCGCACGGCTAGC
TCCATGTTCCGAGCTTCATGCTGGAATAGGGGCAATCCCAGAATGGGCAC
ATTCCGCATGATGCCCTCCTGCAGGTTGAGCAGATCTCCATTGGTTAGGA
AAGCCTTGACTCTCGGATGCGCCAGGATGTCTATCTGCGGCACTGCATGC
TGGATCATCACATTCTTTGGCAGTCCCTCCAGGGTCTTGACGTCGTGACA
GGTCCAGATTATGCTCTGCTTTCTGGCGGAGAAGAAGGCAAACAGAGTGT
CGAGTTTCTCCTTGGGTAGCTGGCCACAAGCCTGCTCATTGCCCAGTTGA
ACGTAGATGGCTCCAGGACGCGCCTCCTCCAGAAAGCGCTTCACATTCCA
GGGCAGCTCCTTGGGACCACGGATGTGAAGTCCACCGGCGGGAATTATCT
GTTGGATACTAACTTTGGGAGTTATCAATGGCACATGACTATTGAGCAGC
AGCACGGATAGCTGGCTGGCCTGCAGCTCGGGGATAGAGCTCTGCAGCTG
GGAGTACT
BO11789.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4414-PA | 1590 | Ugt58Fa-RA | 698..1587 | 908..19 | 4425 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 17:34:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1864 | CG4414-RB | 808..1697 | 908..19 | 4435 | 99.9 | Minus |
Ugt58Fa-RA | 1742 | CG4414-RA | 808..1697 | 908..19 | 4435 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 17:34:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22641953..22642842 | 19..908 | 4435 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-03 17:34:40 has no hits.
BO11789.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:54 Download gff for
BO11789.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 698..1590 | 18..908 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:41 Download gff for
BO11789.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 698..1590 | 18..908 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:36:10 Download gff for
BO11789.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 808..1704 | 10..908 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 19:02:54 Download gff for
BO11789.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 808..1704 | 10..908 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 19:02:54 Download gff for
BO11789.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22641946..22642842 | 10..908 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:36:10 Download gff for
BO11789.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18529451..18530347 | 10..908 | 99 | | Plus |
BO11789.5prime Sequence
876 bp (821 high quality bases) assembled on 2006-04-19
> BO11789.5prime
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAGGAGCTGCCCTGGAAT
BO11789.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4414-PA | 1590 | Ugt58Fa-RA | 1..844 | 17..860 | 4220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:23:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1864 | CG4414-RB | 111..971 | 17..876 | 4280 | 99.9 | Plus |
Ugt58Fa-RA | 1742 | CG4414-RA | 111..971 | 17..876 | 4280 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:22:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22642679..22643286 | 876..270 | 2990 | 99.8 | Minus |
2R | 25286936 | 2R | 22643492..22643654 | 181..19 | 815 | 100 | Minus |
2R | 25286936 | 2R | 22643343..22643430 | 269..182 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:23:02 has no hits.
BO11789.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:54 Download gff for
BO11789.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 1..861 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:43 Download gff for
BO11789.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 1..861 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:38:57 Download gff for
BO11789.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 104..971 | 10..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:10:02 Download gff for
BO11789.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 104..971 | 10..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:10:02 Download gff for
BO11789.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22642679..22643286 | 270..876 | 99 | <- | Minus |
2R | 22643343..22643430 | 182..269 | 100 | <- | Minus |
2R | 22643492..22643654 | 19..181 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:38:57 Download gff for
BO11789.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18530997..18531159 | 19..181 | 100 | | Minus |
arm_2R | 18530184..18530791 | 270..876 | 99 | <- | Minus |
arm_2R | 18530848..18530935 | 182..269 | 100 | <- | Minus |
BO11789.complete Sequence
1621 bp assembled on 2006-10-11
GenBank Submission: FJ632197
> BO11789.complete
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAAGGAGCTGCCCTGGAATGTGAAGCGCTTTCTGGAGGAGGC
GCGTCCTGGAGCCATCTACGTTCAACTGGGCAATGAGCAGGCTTGTGGCC
AGCTACCCAAGGAGAAACTCGACACTCTGTTTGCCTTCTTCTCCGCCAGA
AAGCAGAGCATAATCTGGACCTGTCACGACGTCAAGACCCTGGAGGGACT
GCCAAAGAATGTGATGATCCAGCATGCAGTGCCGCAGATAGACATCCTGG
CGCATCCGAGAGTCAAGGCTTTCCTAACCAATGGAGATCTGCTCAACCTG
CAGGAGGGCATCATGCGGAATGTGCCCATTCTGGGATTGCCCCTATTCCA
GCATGAAGCTCGGAACATGGAGCTAGCCGTGCGATTAGGAGTTGGCCTAC
AGCTGGAGGAGGGCAATGTGACAACTGAGTCACTAAACTGGGCAGTGGAC
AGGCTACTCCTCGAGTCACACTTCCAGTTGACCATCCGGGATGTGTCTCT
GGAGTTCAGGGACCGTCCTCTTGGCGCTCTGGCCAGCGCTCTCTTCTGGG
TGAACTATGTGGCCCGGCACAAGGGAGGATCGGCTTTGAGAACCCGAGGC
ATTGGGATCTCCTCCTGCCAGCTGCACCTGTTCGACCTCTTCGTGTTCTA
TGCCGGAATAGCTACTTTAGTCGTAAGCTTACTGGTGGCCCTGAGTTTTG
GCGGCTTTTATATTTGGAATAAGAAAAACAACTCCAAGTCGACCAAAGTA
AATGCAAGCTTTCTAGACCAT
BO11789.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:08:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1590 | CG4414-PB | 1..1587 | 17..1603 | 7935 | 100 | Plus |
Ugt58Fa-RA | 1590 | CG4414-PA | 1..1587 | 17..1603 | 7935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:08:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1864 | CG4414-RB | 111..1697 | 17..1603 | 7935 | 100 | Plus |
Ugt58Fa-RA | 1742 | CG4414-RA | 111..1697 | 17..1603 | 7935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22641953..22643286 | 1603..270 | 6670 | 100 | Minus |
2R | 25286936 | 2R | 22643492..22643654 | 181..19 | 815 | 100 | Minus |
2R | 25286936 | 2R | 22643343..22643430 | 269..182 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:08:19 has no hits.
BO11789.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:32 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 1..1590 | 17..1604 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:04:33 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 102..1702 | 10..1612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:08 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 111..1697 | 17..1605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:32 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 102..1702 | 10..1612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:37 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 111..1697 | 17..1605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:37 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22643492..22643655 | 17..181 | 99 | | Minus |
2R | 22641951..22643286 | 270..1605 | 99 | <- | Minus |
2R | 22643343..22643430 | 182..269 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:08 Download gff for
BO11789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18529456..18530791 | 270..1605 | 99 | <- | Minus |
arm_2R | 18530848..18530935 | 182..269 | 100 | <- | Minus |
arm_2R | 18530997..18531160 | 17..181 | 99 | | Minus |
BO11789.pep Sequence
Translation from 16 to 1621
> BO11789.pep
MESQWNRWILLAILGLALGQISQAAKILVLFPHVNEGHFAVMRTLVTELA
NREHTIEVYTGHGLGESLDNVTETVTAEFPFWSELQKQAAPKGNLADLGL
LPIEKLRQSLASVGARALDHFLAQEPIQKLLKMSYLEFDFDVILVDYFYT
EALLALGALHQRPVVGIISTDFGNYMDAVQEALVPAACSPIDFERDQPEM
SFSVRLGNIRTCIARRKQFIKDHYGGQEQLVTKYFQLQSSIPELQASQLS
VLLLNSHVPLITPKVSIQQIIPAGGLHIRGPKELPWNVKRFLEEARPGAI
YVQLGNEQACGQLPKEKLDTLFAFFSARKQSIIWTCHDVKTLEGLPKNVM
IQHAVPQIDILAHPRVKAFLTNGDLLNLQEGIMRNVPILGLPLFQHEARN
MELAVRLGVGLQLEEGNVTTESLNWAVDRLLLESHFQLTIRDVSLEFRDR
PLGALASALFWVNYVARHKGGSALRTRGIGISSCQLHLFDLFVFYAGIAT
LVVSLLVALSFGGFYIWNKKNNSKSTKVNASFLDH
BO11789.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-PB | 529 | CG4414-PB | 1..529 | 1..529 | 2713 | 100 | Plus |
Ugt58Fa-PA | 529 | CG4414-PA | 1..529 | 1..529 | 2713 | 100 | Plus |
CG15661-PB | 530 | CG15661-PB | 20..524 | 20..521 | 649 | 30.5 | Plus |
CG15661-PA | 530 | CG15661-PA | 20..524 | 20..521 | 649 | 30.5 | Plus |
CG4302-PA | 532 | CG4302-PA | 11..523 | 10..526 | 645 | 29.9 | Plus |