Clone Sequence Records
BO11791.3prime Sequence
485 bp (484 high quality bases) assembled on 2006-04-19
> BO11791.3prime
ATGGTCTAGAAAGCTTGCGGCGGCCTTCTTTTTGGCCTCCTCCGCCTTGG
CCTTCACGAAGGCCCTGACCTTGTCGCCGATCTTACTGGCCATCATGCAC
TGGTGTCCGCGAAAGGCCCACACATCCGTGGGATTCTTCTGCGCGTTGTC
GTCCACGCAGCTCTGGGCGATCTGAAGGGCCTCCTCCTCGGACAGGTCCA
TCTTGAACTGCTTGGCCAGGCGGTCGGCGTGGTAGCCCTGTTGGTCGCAG
AAGATGCCCAGCTTGATGGCCGAGCAGGTCAGGTACTGGCGCACGTCGGG
CTCATTGGGGAAGATCAGGTTCTTCAGCTGGGAGATCTGGTCGTTGCTCA
GCGGATTCTCCTTGAGGCAATCAACGCGGATTTTCCTGATCTCCTCACCA
GTCTTGGGCGTCCAGTCATCGGCATGGGCCACAGCACAGAGGGCCAGAGC
TACGATCAGATACTTGAGCATGTCGACTGATAACT
BO11791.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7584-PA | 456 | Obp99c-RA | 1..453 | 471..19 | 2265 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99c-RA | 580 | CG7584-RA | 62..514 | 471..19 | 2265 | 100 | Minus |
Obp99c-RB | 566 | CG7584-RB | 88..500 | 431..19 | 2065 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:55:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29685802..29686213 | 19..430 | 2060 | 100 | Plus |
3R | 32079331 | 3R | 29686681..29686723 | 429..471 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 18:55:54 has no hits.
BO11791.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:57 Download gff for
BO11791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7584-PA | 1..456 | 18..471 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:47 Download gff for
BO11791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7584-PA | 1..456 | 18..471 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:23:41 Download gff for
BO11791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 53..514 | 19..482 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:39:54 Download gff for
BO11791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 53..514 | 19..482 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:39:54 Download gff for
BO11791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29685802..29686212 | 19..429 | 100 | <- | Plus |
3R | 29686682..29686732 | 430..482 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:23:41 Download gff for
BO11791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25511524..25511934 | 19..429 | 100 | <- | Plus |
arm_3R | 25512404..25512454 | 430..482 | 92 | | Plus |
BO11791.5prime Sequence
485 bp (484 high quality bases) assembled on 2006-04-19
> BO11791.5prime
GAAGTTATCAGTCGACATGCTCAAGTATCTGATCGTAGCTCTGGCCCTCT
GTGCTGTGGCCCATGCCGATGACTGGACGCCCAAGACTGGTGAGGAGATC
AGGAAAATCCGCGTTGATTGCCTCAAGGAGAATCCGCTGAGCAACGACCA
GATCTCCCAGCTGAAGAACCTGATCTTCCCCAATGAGCCCGACGTGCGCC
AGTACCTGACCTGCTCGGCCATCAAGCTGGGCATCTTCTGCGACCAACAG
GGCTACCACGCCGACCGCCTGGCCAAGCAGTTCAAGATGGACCTGTCCGA
GGAGGAGGCCCTTCAGATCGCCCAGAGCTGCGTGGACGACAACGCGCAGA
AGAATCCCACGGATGTGTGGGCCTTTCGCGGACACCAGTGCATGATGGCC
AGTAAGATCGGCGACAAGGTCAGGGCCTTCGTGAAGGCCAAGGCGGAGGA
GGCCAAAAAGAAGGCCGCCGCAAGCTTTCTAGACC
BO11791.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7584-PA | 456 | Obp99c-RA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:26:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99c-RA | 580 | CG7584-RA | 62..514 | 17..469 | 2265 | 100 | Plus |
Obp99c-RB | 566 | CG7584-RB | 88..500 | 57..469 | 2065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:26:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29685802..29686213 | 469..58 | 2060 | 100 | Minus |
3R | 32079331 | 3R | 29686681..29686723 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:26:37 has no hits.
BO11791.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:58 Download gff for
BO11791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7584-PA | 1..456 | 17..470 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:48 Download gff for
BO11791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7584-PA | 1..456 | 17..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:39:38 Download gff for
BO11791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 53..514 | 6..469 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:10:48 Download gff for
BO11791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 53..514 | 6..469 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:10:48 Download gff for
BO11791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29685802..29686212 | 59..469 | 100 | <- | Minus |
3R | 29686682..29686732 | 6..58 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:39:38 Download gff for
BO11791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25511524..25511934 | 59..469 | 100 | <- | Minus |
arm_3R | 25512404..25512454 | 6..58 | 92 | | Minus |
BO11791.complete Sequence
487 bp assembled on 2006-10-11
GenBank Submission: FJ632199
> BO11791.complete
GAAGTTATCAGTCGACATGCTCAAGTATCTGATCGTAGCTCTGGCCCTCT
GTGCTGTGGCCCATGCCGATGACTGGACGCCCAAGACTGGTGAGGAGATC
AGGAAAATCCGCGTTGATTGCCTCAAGGAGAATCCGCTGAGCAACGACCA
GATCTCCCAGCTGAAGAACCTGATCTTCCCCAATGAGCCCGACGTGCGCC
AGTACCTGACCTGCTCGGCCATCAAGCTGGGCATCTTCTGCGACCAACAG
GGCTACCACGCCGACCGCCTGGCCAAGCAGTTCAAGATGGACCTGTCCGA
GGAGGAGGCCCTTCAGATCGCCCAGAGCTGCGTGGACGACAACGCGCAGA
AGAATCCCACGGATGTGTGGGCCTTTCGCGGACACCAGTGCATGATGGCC
AGTAAGATCGGCGACAAGGTCAGGGCCTTCGTGAAGGCCAAGGCGGAGGA
GGCCAAAAAGAAGGCCGCCGCAAGCTTTCTAGACCAT
BO11791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:17:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99c-RA | 456 | CG7584-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Obp99c-RB | 186 | CG7584-PB | 1..183 | 287..469 | 915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:17:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99c-RA | 580 | CG7584-RA | 62..514 | 17..469 | 2265 | 100 | Plus |
Obp99c-RB | 566 | CG7584-RB | 88..500 | 57..469 | 2065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:17:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29685802..29686213 | 469..58 | 2060 | 100 | Minus |
3R | 32079331 | 3R | 29686681..29686723 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:17:09 has no hits.
BO11791.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:35 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 1..456 | 17..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:04:38 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 51..512 | 6..469 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:52 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 62..514 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:35 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 51..512 | 6..469 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:06 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99c-RA | 62..514 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:06 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29685800..29686212 | 59..471 | 99 | <- | Minus |
3R | 29686682..29686723 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:52 Download gff for
BO11791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25511522..25511934 | 59..471 | 99 | <- | Minus |
arm_3R | 25512404..25512445 | 17..58 | 100 | | Minus |
BO11791.pep Sequence
Translation from 16 to 487
> BO11791.pep
MLKYLIVALALCAVAHADDWTPKTGEEIRKIRVDCLKENPLSNDQISQLK
NLIFPNEPDVRQYLTCSAIKLGIFCDQQGYHADRLAKQFKMDLSEEEALQ
IAQSCVDDNAQKNPTDVWAFRGHQCMMASKIGDKVRAFVKAKAEEAKKKA
AASFLDH
BO11791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99c-PA | 151 | CG7584-PA | 1..151 | 1..151 | 789 | 100 | Plus |
Obp99c-PB | 61 | CG7584-PB | 1..61 | 91..151 | 313 | 100 | Plus |
Obp44a-PB | 143 | CG2297-PB | 5..133 | 7..131 | 191 | 28.7 | Plus |
Obp44a-PA | 143 | CG2297-PA | 5..133 | 7..131 | 191 | 28.7 | Plus |