Clone BO11791 Report

Search the DGRC for BO11791

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:117
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptObp99c-RA
Protein status:BO11791.pep: validated full length
Sequenced Size:487

Clone Sequence Records

BO11791.3prime Sequence

485 bp (484 high quality bases) assembled on 2006-04-19

> BO11791.3prime
ATGGTCTAGAAAGCTTGCGGCGGCCTTCTTTTTGGCCTCCTCCGCCTTGG
CCTTCACGAAGGCCCTGACCTTGTCGCCGATCTTACTGGCCATCATGCAC
TGGTGTCCGCGAAAGGCCCACACATCCGTGGGATTCTTCTGCGCGTTGTC
GTCCACGCAGCTCTGGGCGATCTGAAGGGCCTCCTCCTCGGACAGGTCCA
TCTTGAACTGCTTGGCCAGGCGGTCGGCGTGGTAGCCCTGTTGGTCGCAG
AAGATGCCCAGCTTGATGGCCGAGCAGGTCAGGTACTGGCGCACGTCGGG
CTCATTGGGGAAGATCAGGTTCTTCAGCTGGGAGATCTGGTCGTTGCTCA
GCGGATTCTCCTTGAGGCAATCAACGCGGATTTTCCTGATCTCCTCACCA
GTCTTGGGCGTCCAGTCATCGGCATGGGCCACAGCACAGAGGGCCAGAGC
TACGATCAGATACTTGAGCATGTCGACTGATAACT

BO11791.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7584-PA 456 Obp99c-RA 1..453 471..19 2265 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99c-RA 580 CG7584-RA 62..514 471..19 2265 100 Minus
Obp99c-RB 566 CG7584-RB 88..500 431..19 2065 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29685802..29686213 19..430 2060 100 Plus
3R 32079331 3R 29686681..29686723 429..471 215 100 Plus
Blast to na_te.dros performed on 2015-02-12 18:55:54 has no hits.

BO11791.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:57 Download gff for BO11791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7584-PA 1..456 18..471 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:47 Download gff for BO11791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7584-PA 1..456 18..471 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:23:41 Download gff for BO11791.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 53..514 19..482 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:39:54 Download gff for BO11791.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 53..514 19..482 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:39:54 Download gff for BO11791.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29685802..29686212 19..429 100 <- Plus
3R 29686682..29686732 430..482 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:23:41 Download gff for BO11791.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25511524..25511934 19..429 100 <- Plus
arm_3R 25512404..25512454 430..482 92   Plus

BO11791.5prime Sequence

485 bp (484 high quality bases) assembled on 2006-04-19

> BO11791.5prime
GAAGTTATCAGTCGACATGCTCAAGTATCTGATCGTAGCTCTGGCCCTCT
GTGCTGTGGCCCATGCCGATGACTGGACGCCCAAGACTGGTGAGGAGATC
AGGAAAATCCGCGTTGATTGCCTCAAGGAGAATCCGCTGAGCAACGACCA
GATCTCCCAGCTGAAGAACCTGATCTTCCCCAATGAGCCCGACGTGCGCC
AGTACCTGACCTGCTCGGCCATCAAGCTGGGCATCTTCTGCGACCAACAG
GGCTACCACGCCGACCGCCTGGCCAAGCAGTTCAAGATGGACCTGTCCGA
GGAGGAGGCCCTTCAGATCGCCCAGAGCTGCGTGGACGACAACGCGCAGA
AGAATCCCACGGATGTGTGGGCCTTTCGCGGACACCAGTGCATGATGGCC
AGTAAGATCGGCGACAAGGTCAGGGCCTTCGTGAAGGCCAAGGCGGAGGA
GGCCAAAAAGAAGGCCGCCGCAAGCTTTCTAGACC

BO11791.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7584-PA 456 Obp99c-RA 1..453 17..469 2265 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:26:40
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99c-RA 580 CG7584-RA 62..514 17..469 2265 100 Plus
Obp99c-RB 566 CG7584-RB 88..500 57..469 2065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:26:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29685802..29686213 469..58 2060 100 Minus
3R 32079331 3R 29686681..29686723 59..17 215 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:26:37 has no hits.

BO11791.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:16:58 Download gff for BO11791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7584-PA 1..456 17..470 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:44:48 Download gff for BO11791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7584-PA 1..456 17..470 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:39:38 Download gff for BO11791.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 53..514 6..469 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:10:48 Download gff for BO11791.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 53..514 6..469 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:10:48 Download gff for BO11791.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29685802..29686212 59..469 100 <- Minus
3R 29686682..29686732 6..58 92   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:39:38 Download gff for BO11791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25511524..25511934 59..469 100 <- Minus
arm_3R 25512404..25512454 6..58 92   Minus

BO11791.complete Sequence

487 bp assembled on 2006-10-11

GenBank Submission: FJ632199

> BO11791.complete
GAAGTTATCAGTCGACATGCTCAAGTATCTGATCGTAGCTCTGGCCCTCT
GTGCTGTGGCCCATGCCGATGACTGGACGCCCAAGACTGGTGAGGAGATC
AGGAAAATCCGCGTTGATTGCCTCAAGGAGAATCCGCTGAGCAACGACCA
GATCTCCCAGCTGAAGAACCTGATCTTCCCCAATGAGCCCGACGTGCGCC
AGTACCTGACCTGCTCGGCCATCAAGCTGGGCATCTTCTGCGACCAACAG
GGCTACCACGCCGACCGCCTGGCCAAGCAGTTCAAGATGGACCTGTCCGA
GGAGGAGGCCCTTCAGATCGCCCAGAGCTGCGTGGACGACAACGCGCAGA
AGAATCCCACGGATGTGTGGGCCTTTCGCGGACACCAGTGCATGATGGCC
AGTAAGATCGGCGACAAGGTCAGGGCCTTCGTGAAGGCCAAGGCGGAGGA
GGCCAAAAAGAAGGCCGCCGCAAGCTTTCTAGACCAT

BO11791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99c-RA 456 CG7584-PA 1..453 17..469 2265 100 Plus
Obp99c-RB 186 CG7584-PB 1..183 287..469 915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99c-RA 580 CG7584-RA 62..514 17..469 2265 100 Plus
Obp99c-RB 566 CG7584-RB 88..500 57..469 2065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29685802..29686213 469..58 2060 100 Minus
3R 32079331 3R 29686681..29686723 59..17 215 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:17:09 has no hits.

BO11791.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:35 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 1..456 17..470 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:04:38 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 51..512 6..469 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:52 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 62..514 17..471 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:35 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 51..512 6..469 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:06 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99c-RA 62..514 17..471 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:06 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29685800..29686212 59..471 99 <- Minus
3R 29686682..29686723 17..58 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:52 Download gff for BO11791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25511522..25511934 59..471 99 <- Minus
arm_3R 25512404..25512445 17..58 100   Minus

BO11791.pep Sequence

Translation from 16 to 487

> BO11791.pep
MLKYLIVALALCAVAHADDWTPKTGEEIRKIRVDCLKENPLSNDQISQLK
NLIFPNEPDVRQYLTCSAIKLGIFCDQQGYHADRLAKQFKMDLSEEEALQ
IAQSCVDDNAQKNPTDVWAFRGHQCMMASKIGDKVRAFVKAKAEEAKKKA
AASFLDH

BO11791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99c-PA 151 CG7584-PA 1..151 1..151 789 100 Plus
Obp99c-PB 61 CG7584-PB 1..61 91..151 313 100 Plus
Obp44a-PB 143 CG2297-PB 5..133 7..131 191 28.7 Plus
Obp44a-PA 143 CG2297-PA 5..133 7..131 191 28.7 Plus