Clone BO11807 Report

Search the DGRC for BO11807

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:118
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG16749-RA
Protein status:BO11807.pep: Imported from assembly
Sequenced Size:830

Clone Sequence Records

BO11807.3prime Sequence

828 bp (771 high quality bases) assembled on 2006-04-19

> BO11807.3prime
ATGGTCTAGAAAGCTTGGCGGCCAAGATGATCTGGCTCTTCTTGATCCAG
TCAACATACTGGCTGACCTTGCAGTAAACACCCGGATAGGGTGCCACGGT
GCAGGGCTTGATGCTCCACGACACGATGCCCACCTGCTGGCCATTGTAGA
TGAGGGGTCCACCCGAATCTCCGCTGCACTGTCCCTTGCCACCCTCGTCC
ACCCCTCCGCAGATGTGGTACCTGGGATCGGTGCGACCGCCATGGCGTTC
GGTGCACTCCTCGTCTGAGTAGACCTTCAATTCCACCTCCTGCAGTGTGG
ATTGGATGTATCCGCCAGTCGCATTGAGTCCCCATCCGATGAGCACCCCC
TCGCCACCGGCATCCGTTTGAGGTGTGGCAAAGGCGAGCTCCGGCAACTT
TACGGGTGCAACCGTGACGCCATCAAACTCGAATGGCTCCTCCACGAGCA
GCAGTGAAATATCGTTGGCATAGTTGTTGTAGGGATTATAATCCTCGTGC
TGGATGATCTTCTTCACGCGCACCACATTCGGACCGGTGGCATTAATCTT
AGTCACTCCATACTGAACAGACAAATCCGATGCCTTGCGTCCATCCGTAC
AATGAGCAGCAGTCATTACAAACTGCTTGGAAATAATGGAGCCACCGCAG
GAATGCGAGCCACTGGATCCACGCATCGAAATCACGAAGGGGTATTTCTC
CACGCTGGAATCCGTGCCATTGACCACACGACCCATTTGGGGAGCTCCAT
GGGAAATGCCCGCGGTGGTCAAGAGGGCGAATACCGCCAGGCAGAGATCC
TGATTCCGCGACATGTCGACTGATAACT

BO11807.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-PA 798 CG16749-RA 1..795 814..20 3950 99.8 Minus
CG12951-PA 798 CG12951-RA 628..773 187..42 505 93.8 Minus
CG12951-PA 798 CG12951-RA 153..215 662..600 140 88.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 873 CG16749-RA 7..801 814..20 3960 99.9 Minus
CG12951-RA 857 CG12951-RA 94..779 727..42 1060 77.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:45:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9331320..9331683 320..683 1805 99.7 Plus
3R 32079331 3R 9330957..9331257 20..320 1505 100 Plus
3R 32079331 3R 9329301..9329488 42..229 670 90.4 Plus
3R 32079331 3R 9331748..9331879 683..814 660 100 Plus
3R 32079331 3R 9329643..9329983 322..662 430 75.1 Plus
Blast to na_te.dros performed on 2015-02-12 04:45:30 has no hits.

BO11807.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:19 Download gff for BO11807.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 19..814 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:17 Download gff for BO11807.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 19..814 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:28:34 Download gff for BO11807.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..801 20..817 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:05:45 Download gff for BO11807.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..801 20..817 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:05:45 Download gff for BO11807.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9330957..9331256 20..319 100 <- Plus
3R 9331320..9331682 320..682 99 <- Plus
3R 9331748..9331879 683..814 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:28:34 Download gff for BO11807.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5156679..5156978 20..319 100 <- Plus
arm_3R 5157042..5157404 320..682 99 <- Plus
arm_3R 5157470..5157601 683..814 100   Plus

BO11807.5prime Sequence

828 bp (789 high quality bases) assembled on 2006-04-19

> BO11807.5prime
GAAGTTATCAGTCGACATGTCGCGGAATCAGGATCTCTGCCTGGCGGTAT
TCGCCCTCTTGACCACCGCGGGCATTTCCCATGGAGCTCCCCAAATGGGT
CGTGTGGTCAATGGCACGGATTCCAGCGTGGAGAAATACCCCTTCGTGAT
TTCGATGCGTGGATCCAGTGGCTCGCATTCCTGCGGTGGCTCCATTATTT
CCAAGCAGTTTGTAATGACTGCTGCTCATTGTACGGATGGACGCAAGGCA
TCGGATTTGTCTGTTCAGTATGGAGTGACTAAGATTAATGCCACCGGTCC
GAATGTGGTGCGCGTGAAGAAGATCATCCAGCACGAGGATTATAATCCCT
ACAACAACTATGCCAACGATATTTCACTGCTGCTCGTGGAGGAGCCATTC
GAGTTTGATGGCGTCACGGTTGCACCCGTAAAGTTGCCGGAGCTCGCCTT
TGCCACACCTCAAACGGATGCCGGTGGCGAGGGGGTGCTCATCGGATGGG
GACTCAATGCGACTGGCGGATACATCCAATCCACACTGCAGGAGGTGGAA
TTGAAGGTCTACTCAGACGAGGAGTGCACCGAACGCCATGGCGGTCGCAC
CGATCCCAGGTACCACATCTGCGGAGGGGTGGACGAGGGTGGCAAGGGAC
AGTGCAGCGGAGATTCGGGTGGACCCCTCATCTACAATGGCCAGCAGGTG
GGCATCGTGTCGTGGAGCATCAAGCCCTGCACCGTGGCACCCTATCCGGG
TGTTTACTGCAAGGTCAGCCAGTATGTTGACTGGATCAAGAAGAGCCAGA
TCATCTTGGCCGCCAAGCTTTCTAGACC

BO11807.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-PA 798 CG16749-RA 1..795 17..811 3950 99.8 Plus
CG12951-PA 798 CG12951-RA 628..773 644..789 505 93.8 Plus
CG12951-PA 798 CG12951-RA 153..215 169..231 140 88.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 873 CG16749-RA 7..801 17..811 3960 99.9 Plus
CG12951-RA 857 CG12951-RA 94..779 104..789 1060 77.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:44:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9331320..9331683 511..148 1805 99.7 Minus
3R 32079331 3R 9330957..9331257 811..511 1505 100 Minus
3R 32079331 3R 9329301..9329488 789..602 670 90.4 Minus
3R 32079331 3R 9331748..9331879 148..17 660 100 Minus
3R 32079331 3R 9329643..9329983 509..169 430 75.1 Minus
Blast to na_te.dros performed on 2015-02-13 09:44:59 has no hits.

BO11807.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:20 Download gff for BO11807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 17..812 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:19 Download gff for BO11807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 17..812 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:46:04 Download gff for BO11807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..801 14..811 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:08:32 Download gff for BO11807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..801 14..811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:08:32 Download gff for BO11807.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9331748..9331879 17..148 100   Minus
3R 9330957..9331256 512..811 100 <- Minus
3R 9331320..9331682 149..511 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:46:04 Download gff for BO11807.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5156679..5156978 512..811 100 <- Minus
arm_3R 5157042..5157404 149..511 99 <- Minus
arm_3R 5157470..5157601 17..148 100   Minus

BO11807.complete Sequence

830 bp assembled on 2008-08-15

> BO11807.complete
GAAGTTATCAGTCGACATGTCGCGGAATCAGGATCTCTGCCTGGCGGTAT
TCGCCCTCTTGACCACCGCGGGCATTTCCCATGGAGCTCCCCAAATGGGT
CGTGTGGTCAATGGCACGGATTCCAGCGTGGAGAAATACCCCTTCGTGAT
TTCGATGCGTGGATCCAGTGGCTCGCATTCCTGCGGTGGCTCCATTATTT
CCAAGCAGTTTGTAATGACTGCTGCTCATTGTACGGATGGACGCAAGGCA
TCGGATTTGTCTGTTCAGTATGGAGTGACTAAGATTAATGCCACCGGTCC
GAATGTGGTGCGCGTGAAGAAGATCATCCAGCACGAGGATTATAATCCCT
ACAACAACTATGCCAACGATATTTCACTGCTGCTCGTGGAGGAGCCATTC
GAGTTTGATGGCGTCACGGTTGCACCCGTAAAGTTGCCGGAGCTCGCCTT
TGCCACACCTCAAACGGATGCCGGTGGCGAGGGGGTGCTCATCGGATGGG
GACTCAATGCGACTGGCGGATACATCCAATCCACACTGCAGGAGGTGGAA
TTGAAGGTCTACTCAGACGAGGAGTGCACCGAACGCCATGGCGGTCGCAC
CGATCCCAGGTACCACATCTGCGGAGGGGTGGACGAGGGTGGCAAGGGAC
AGTGCAGCGGAGATTCGGGTGGACCCCTCATCTACAATGGCCAGCAGGTG
GGCATCGTGTCGTGGAGCATCAAGCCCTGCACCGTGGCACCCTATCCGGG
TGTTTACTGCAAGGTCAGCCAGTATGTTGACTGGATCAAGAAGAGCCAGA
TCATCTTGGCCGCCAAGCTTTCTAGACCAT

BO11807.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 798 CG16749-PA 1..795 17..811 3960 99.9 Plus
CG12951-RA 798 CG12951-PA 88..773 104..789 1045 76.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 873 CG16749-RA 7..801 17..811 3960 99.9 Plus
CG12951-RA 857 CG12951-RA 94..779 104..789 1045 76.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9331320..9331683 511..148 1805 99.7 Minus
3R 32079331 3R 9330957..9331257 811..511 1505 100 Minus
3R 32079331 3R 9329301..9329488 789..602 670 90.4 Minus
3R 32079331 3R 9331748..9331879 148..17 660 100 Minus
3R 32079331 3R 9329643..9329983 509..169 430 75.1 Minus
Blast to na_te.dros performed on 2014-11-27 15:15:46 has no hits.

BO11807.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:07:41 Download gff for BO11807.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 17..811 17..811 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:18 Download gff for BO11807.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 7..801 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:05:03 Download gff for BO11807.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 17..811 17..814 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:35 Download gff for BO11807.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 7..801 17..814 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:35 Download gff for BO11807.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9330952..9331256 512..814 99 <- Minus
3R 9331320..9331682 149..511 99 <- Minus
3R 9331748..9331879 17..148 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:18 Download gff for BO11807.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5156674..5156978 512..814 99 <- Minus
arm_3R 5157042..5157404 149..511 99 <- Minus
arm_3R 5157470..5157601 17..148 100   Minus

BO11807.pep Sequence

Translation from 16 to 829

> BO11807.pep
MSRNQDLCLAVFALLTTAGISHGAPQMGRVVNGTDSSVEKYPFVISMRGS
SGSHSCGGSIISKQFVMTAAHCTDGRKASDLSVQYGVTKINATGPNVVRV
KKIIQHEDYNPYNNYANDISLLLVEEPFEFDGVTVAPVKLPELAFATPQT
DAGGEGVLIGWGLNATGGYIQSTLQEVELKVYSDEECTERHGGRTDPRYH
ICGGVDEGGKGQCSGDSGGPLIYNGQQVGIVSWSIKPCTVAPYPGVYCKV
SQYVDWIKKSQIILAAKLSRP

BO11807.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-PA 265 CG16749-PA 1..265 1..265 1408 100 Plus
CG12951-PA 265 CG12951-PA 1..265 1..265 1088 75.8 Plus
CG32808-PA 284 CG32808-PA 7..255 9..257 560 47.2 Plus
etaTry-PA 262 CG12386-PA 9..258 9..261 385 36 Plus
CG31954-PA 277 CG31954-PA 49..273 28..259 382 40.5 Plus