Clone Sequence Records
BO11814.3prime Sequence
806 bp (805 high quality bases) assembled on 2006-04-19
> BO11814.3prime
ATGGTCTAGAAAGCTTGCCAACAAGAACTTTTTAACGCTTTGGGCATAGG
CTGTATTGGTCAGCTTTTCATTGAGCGCCTCCTTGGGAAGCCACTCGAAC
TTGGTCAGATTTTCGGGCACCTGGCCGGACCGCAGGGATGCTCTGTAGAA
GAAGACCTTGGCTCCGACAGTCTCCGTCCGCTGGTTTCTGGGATACTTGT
ATTTGTGGAAGCCCACTGGGGCGTTGCCGTAGAAAAGAACCTGCAGCTCC
TGGCCGCAACTCTCGCGGAGCACTCTTTCTGCAGTCTGACGCATGGACTC
TCCCTCCTCACGCTTTCCCTGCGGTAGAATGAGGTGCTCCTGCTGGCCCA
GCTTCTGCTGTACCAAAAGGTAGAGCGTGTCATCCAGACAGCGGTCCGTG
GAGGTGGTTCTGTTGGCCTGGTCATCGGGCGTGGTGCGGGAGCCCAACTG
GAACTTTTTTAGCTCCTCGACGTAGGCGTCCTTGAGGTCCTGAGCTGTCT
GCTTGGATCCTGCGTCCTCCAAGTCCACCTGGATCTTGCCCTGCTTTATG
AGCTCCGCCTGGACGATCTCACGTTCATGCTTGAGTTCATGGTCAGACTT
CAGGCTGTTTTCGTACTCCACGCGCCATAGCAAGTCTTGGAACTGTTTTT
CCAGCGGATTAAGGGACTTGGACACCACAGGGAGACGCTCTACGAGCACT
CCGGCGTACAGGTCCCACTTTTCCGCGCTGGCGGTTGACGATTGGGCTCG
GCTCAACTCCCGGGCACCCACTTGGACAATGCGACGCAGCATGTCGACTG
ATAACT
BO11814.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13922-PA | 777 | mRpL46-RA | 1..774 | 792..19 | 3870 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL46-RA | 909 | CG13922-RA | 78..851 | 792..19 | 3870 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1777516..1778289 | 792..19 | 3870 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:01:53 has no hits.
BO11814.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:31 Download gff for
BO11814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13922-PA | 1..777 | 15..792 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:35 Download gff for
BO11814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13922-PA | 1..777 | 15..792 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:51:18 Download gff for
BO11814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..854 | 15..792 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:16:17 Download gff for
BO11814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..854 | 15..792 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:16:17 Download gff for
BO11814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1777516..1778292 | 15..792 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:51:18 Download gff for
BO11814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1777516..1778292 | 15..792 | 99 | | Minus |
BO11814.5prime Sequence
806 bp (764 high quality bases) assembled on 2006-04-19
> BO11814.5prime
GAAGTTATCAGTCGACATGCTGCGTCGCATTGTCCAAGTGGGTGCCCGGG
AGTTGAGCCGAGCCCAATCGTCAACCGCCAGCGCGGAAAAGTGGGACCTG
TACGCCGGAGTGCTCGTAGAGCGTCTCCCTGTGGTGTCCAAGTCCCTTAA
TCCGCTGGAAAAACAGTTCCAAGACTTGCTATGGCGCGTGGAGTACGAAA
ACAGCCTGAAGTCTGACCATGAACTCAAGCATGAACGTGAGATCGTCCAG
GCGGAGCTCATAAAGCAGGGCAAGATCCAGGTGGACTTGGAGGACGCAGG
ATCCAAGCAGACAGCTCAGGACCTCAAGGACGCCTACGTCGAGGAGCTAA
AAAAGTTCCAGTTGGGCTCCCGCACCACGCCCGATGACCAGGCCAACAGA
ACCACCTCCACGGACCGCTGTCTGGATGACACGCTCTACCTTTTGGTACA
GCAGAAGCTGGGCCAGCAGGAGCACCTCATTCTACCGCAGGGAAAGCGTG
AGGAGGGAGAGTCCATGCGTCAGACTGCAGAAAGAGTGCTCCGCGAGAGT
TGCGGCCAGGAGCTGCAGGTTCTTTTCTACGGCAACGCCCCAGTGGGCTT
CCACAAATACAAGTATCCCAGAAACCAGCGGACGGAGACTGTCGGAGCCA
AGGTCTTCTTCTACAGAGCATCCCTGCGGTCCGGCCAGGTGCCCGAAAAT
CTGACCAAGTTCGAGTGGCTTCCCAAGGAGGCGCTCAATGAAAAGCTGAC
CAATACAGCCTATGCCCNAAGCGTTAAAAAGTTCTTGTTGGCAAGCTTTC
TAGACC
BO11814.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13922-PA | 777 | mRpL46-RA | 1..774 | 17..790 | 3851 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:36:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL46-RA | 909 | CG13922-RA | 78..851 | 17..790 | 3859 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1777516..1778289 | 17..790 | 3859 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:36:46 has no hits.
BO11814.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:32 Download gff for
BO11814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13922-PA | 1..777 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:36 Download gff for
BO11814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13922-PA | 1..777 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 18:33:04 Download gff for
BO11814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..854 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:51:45 Download gff for
BO11814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..854 | 17..794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:51:45 Download gff for
BO11814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1777516..1778292 | 17..794 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 18:33:04 Download gff for
BO11814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1777516..1778292 | 17..794 | 99 | | Plus |
BO11814.complete Sequence
808 bp assembled on 2006-10-11
GenBank Submission: FJ632205
> BO11814.complete
GAAGTTATCAGTCGACATGCTGCGTCGCATTGTCCAAGTGGGTGCCCGGG
AGTTGAGCCGAGCCCAATCGTCAACCGCCAGCGCGGAAAAGTGGGACCTG
TACGCCGGAGTGCTCGTAGAGCGTCTCCCTGTGGTGTCCAAGTCCCTTAA
TCCGCTGGAAAAACAGTTCCAAGACTTGCTATGGCGCGTGGAGTACGAAA
ACAGCCTGAAGTCTGACCATGAACTCAAGCATGAACGTGAGATCGTCCAG
GCGGAGCTCATAAAGCAGGGCAAGATCCAGGTGGACTTGGAGGACGCAGG
ATCCAAGCAGACAGCTCAGGACCTCAAGGACGCCTACGTCGAGGAGCTAA
AAAAGTTCCAGTTGGGCTCCCGCACCACGCCCGATGACCAGGCCAACAGA
ACCACCTCCACGGACCGCTGTCTGGATGACACGCTCTACCTTTTGGTACA
GCAGAAGCTGGGCCAGCAGGAGCACCTCATTCTACCGCAGGGAAAGCGTG
AGGAGGGAGAGTCCATGCGTCAGACTGCAGAAAGAGTGCTCCGCGAGAGT
TGCGGCCAGGAGCTGCAGGTTCTTTTCTACGGCAACGCCCCAGTGGGCTT
CCACAAATACAAGTATCCCAGAAACCAGCGGACGGAGACTGTCGGAGCCA
AGGTCTTCTTCTACAGAGCATCCCTGCGGTCCGGCCAGGTGCCCGAAAAT
CTGACCAAGTTCGAGTGGCTTCCCAAGGAGGCGCTCAATGAAAAGCTGAC
CAATACAGCCTATGCCCAAAGCGTTAAAAAGTTCTTGTTGGCAAGCTTTC
TAGACCAT
BO11814.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL46-RA | 777 | CG13922-PA | 1..774 | 17..790 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:21:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL46-RA | 909 | CG13922-RA | 78..851 | 17..790 | 3870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1777516..1778289 | 17..790 | 3870 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:21:06 has no hits.
BO11814.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:26 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 1..777 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:04:27 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 76..852 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:09:48 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..851 | 17..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:27 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 76..852 | 17..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:16:34 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..851 | 17..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:16:34 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1777516..1778289 | 17..792 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:09:48 Download gff for
BO11814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1777516..1778289 | 17..792 | 99 | | Plus |
BO11814.pep Sequence
Translation from 16 to 808
> BO11814.pep
MLRRIVQVGARELSRAQSSTASAEKWDLYAGVLVERLPVVSKSLNPLEKQ
FQDLLWRVEYENSLKSDHELKHEREIVQAELIKQGKIQVDLEDAGSKQTA
QDLKDAYVEELKKFQLGSRTTPDDQANRTTSTDRCLDDTLYLLVQQKLGQ
QEHLILPQGKREEGESMRQTAERVLRESCGQELQVLFYGNAPVGFHKYKY
PRNQRTETVGAKVFFYRASLRSGQVPENLTKFEWLPKEALNEKLTNTAYA
QSVKKFLLASFLDH
BO11814.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL46-PA | 258 | CG13922-PA | 1..258 | 1..258 | 1314 | 100 | Plus |
