Clone BO11815 Report

Search the DGRC for BO11815

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:118
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptOatp33Eb-RA
Protein status:BO11815.pep:
Sequenced Size:2476

Clone Sequence Records

BO11815.3prime Sequence

877 bp (840 high quality bases) assembled on 2006-04-19

> BO11815.3prime
ATGGTCTAGAAAGCTTGCGAAGTCCGTTTCTGGGCTCTGTGGCCTCGGAC
TCTCAGGTTGCGGTTGATGGTTTGGATGAAGGTCTCTGGTTATCGGAAGC
ACAGCTTGGACCTGCGGTTGGGTGACCACCACATCGTCGGTGTCTACAGT
GTCTAGACCCCTGTCCGCCTCCTGTTTGGGAGGATTGAAGGACTTCAGGT
TGCCCAACTGGCTGCGAACGTCCGACTCGGAGAGCAGATGCAATGGTACG
TTCGCTGGGACGGCCAACCGCTTGGGACTGGTGCTACCATCATCTGGCTT
ACGTCTGTCTGGTGGAAAGACCACTTGTGCATAGGTGACCCCACTCTCAC
TGGGCTCCACAATGCTCTGTGCTCCACCCGATGAAGTAGTCACCGAACTG
GGATTCCTGAATACCGCTGTCTCTGTCCGTGGTTCTGGAGCGGCATCTCT
GCGTTGAATGGGCGATGAGGTGGTGGTGGTGGTTACTGGACTTCCTCCAC
GTGGAGCACTGGGCGACGTTGTCGCATCCTCATGCGGAATTGGTGCGTAC
AGAGAGGGTGTGTAATTATTGTCCGTCACCTTGCAGTTGTAAAGATTGAG
TCCTTTGGCGAATATGTATACGAGTATGTCGAAAAGCACACTGGCCAGGA
TCAATGAGGCTGTGAGAATATCGAGGATGTTGCCATGCTTCGGCGTTTCT
CGCAGCAGACAGCGCTCGTAGTTGGGTGCCCAGTAAACGCAGGTTGTACG
GGTGACAATGTCGTAGCTGAGATGCACTGGAACATAGGCGAAAAGGCCCA
CGATCATTAGTTCAAAGGCCAGGGCCAATGACTTATCCTGTGGCAGGACA
GCTCGCATTGTGATCATCGTCTTTCCT

BO11815.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG6417-PA 2445 Oatp33Eb-RA 1584..2442 877..19 4245 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
Oatp33Eb-RA 2743 CG6417-RA 1762..2620 877..19 4265 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12451194..12451924 749..19 3655 100 Minus
2L 23513712 2L 12451002..12451131 877..748 620 98.5 Minus
Blast to na_te.dros performed on 2015-02-10 22:30:45 has no hits.

BO11815.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:33 Download gff for BO11815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6417-PA 1584..2445 15..877 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:38 Download gff for BO11815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6417-PA 1584..2445 15..877 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:56:41 Download gff for BO11815.3prime
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 1762..2623 15..877 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:02:31 Download gff for BO11815.3prime
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 1762..2623 15..877 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:02:31 Download gff for BO11815.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 12451002..12451129 750..877 98 -> Minus
2L 12451194..12451927 15..749 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:56:41 Download gff for BO11815.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12451002..12451129 750..877 98 -> Minus
arm_2L 12451194..12451927 15..749 99   Minus

BO11815.5prime Sequence

902 bp (778 high quality bases) assembled on 2006-04-19

> BO11815.5prime
GAAGTTATCAGTCGACATGGCGCATAATACGCGCAACTCCGATTTATCGC
AGATAGCTGTCAATGCCAACAATATACCCGATGACAGCGTCGATTGTGGC
ATCAAGGGTCTGGGATGGTGTCGCGGTCCCGGATGCCAGAAATATGCCCG
ACTGCGCACCTTCATCCTGGTACTGGCCATCTCGGGAACCCTACAGGGCG
CCTGCGAATCCTACTTCCGCGTGTCGGCCAAACAGGCTTCCTTTCAGTTC
GGTTGGAATCCACTGATTGTGGATTGGCTGCTGGTGGCCAGTGGATTATT
CCAGGCGGTCTTTGCGTTGGCTTTCGCCTACTGGGCGGACGTCTATCATC
CCATCAAATGGCTGGTGGGAACTCTGATGCTGCAGGCGGTCACCTGTGTG
GTGGCTGTGATTCCCTCCATTATGAACTTTGCCGATGGCAACCAGGCAAA
GGATGCTCTGCTGGATGCCAATATGTGCGCCACATCCTTGGCACAGTTCC
AAAGGCTCACACTGACCGAGGCCCAGAGCAGCAGCCTAACCCTTGCGATG
CTCTTCGTTCTTCAGCTGGCCTTGGGAATGGGAGGATTGGCCTACTACAC
GCTGGGGGTTAGCTACATCGACGACAACTCCCTGTCCCAAGATAGTCCGG
CGGTGATAGGTGCTGCTCTGGCTGCGCGCGTATTTGGCCAGCAGGCTGGA
TCCTTCCTAGTGCTTGGCGTTGGTCTCACCCATGTGGGTTGGTGGCTCGG
TTGGGTGATACTGGCACCCTTCATTTTCGTGGGCGCTGTGCTCCTGGGAC
TGTTTCCCAAACGACTGCCCAAGACCGTCATTCACCAGGCGGCGCAACGG
ATCATTGAGCAGTCCAGCATGCGTAGGTTTGGCAGCCAGTTCTCCACTAT
AT

BO11815.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG6417-PA 2445 Oatp33Eb-RA 1..878 17..894 4365 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:46:21
Subject Length Description Subject Range Query Range Score Percent Strand
Oatp33Eb-RA 2743 CG6417-RA 179..1065 17..902 4380 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12449832..12450296 430..894 2310 99.8 Plus
2L 23513712 2L 12448806..12448995 83..272 950 100 Plus
2L 23513712 2L 12449596..12449753 272..429 790 100 Plus
2L 23513712 2L 12448662..12448728 17..83 335 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:46:18 has no hits.

BO11815.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:34 Download gff for BO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6417-PA 1..885 17..902 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:39 Download gff for BO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6417-PA 1..885 17..902 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:13:37 Download gff for BO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 179..1063 17..902 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:14:56 Download gff for BO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 179..1063 17..902 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:14:56 Download gff for BO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12448662..12448728 17..83 100 -> Plus
2L 12448807..12448995 84..272 100 -> Plus
2L 12449597..12449753 273..429 100 -> Plus
2L 12449832..12450303 430..902 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:13:37 Download gff for BO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12448807..12448995 84..272 100 -> Plus
arm_2L 12449597..12449753 273..429 100 -> Plus
arm_2L 12448662..12448728 17..83 100 -> Plus
arm_2L 12449832..12450303 430..902 99   Plus

BO11815.complete Sequence

2476 bp assembled on 2008-01-17

GenBank Submission: FJ632206

> BO11815.complete
GAAGTTATCAGTCGACATGGCGCATAATACGCGCAACTCCGATTTATCGC
AGATAGCTGTCAATGCCAACAATATACCCGATGACAGCGTCGATTGTGGC
ATCAAGGGTCTGGGATGGTGTCGCGGTCCCGGATGCCAGAAATATGCCCG
ACTGCGCACCTTCATCCTGGTACTGGCCATCTCGGGAACCCTACAGGGCG
CCTGCGAATCCTACTTCCGCGTGTCGGCCAAACAGGCTTCCTTTCAGTTC
GGTTGGAATCCACTGATTGTGGATTGGCTGCTGGTGGCCAGTGGATTATT
CCAGGCGGTCTTTGCGTTGGCTTTCGCCTACTGGGCGGACGTCTATCATC
CCATCAAATGGCTGGTGGGAACTCTGATGCTGCAGGCGGTCACCTGTGTG
GTGGCTGTGATTCCCTCCATTATGAACTTTGCCGATGGCAACCAGGCAAA
GGATGCTCTGCTGGATGCCAATATGTGCGCCACATCCTTGGCACAGTTCC
AAAGGCTCACACTGACCGAGGCCCAGAGCAGCAGCCTAACCCTTGCGATG
CTCTTCGTTCTTCAGCTGGCCTTGGGAATGGGAGGATTGGCCTACTACAC
GCTGGGGGTTAGCTACATCGACGACAACTCCCTGTCCCAAGATAGTCCGG
CGGTGATAGGTGCTGCTCTGGCTGCGCGCGTATTTGGCCAGCAGGCTGGA
TCCTTCCTAGTGCTTGGCGTTGGTCTCACCCATGTGGGTTGGTGGCTCGG
TTGGGTGATACTGGCACCCTTCATTTTCGTGGGCGCTGTGCTCCTGGGAC
TGTTTCCCAAACGACTGCCAAAGACCGTCATTCACCAGGCGGCGCAACGG
ATCATTGAGCAGTCCAGCATGCGTAGGTTTGGCAGCCAGTTCTCAACATA
TATGGATGACTCCGATTTTTGGCCATCTCTGAAGAGGCTATTCAATAACC
GCCTACTGATGTTCAATCTGTTGAGCATCATGTGCGTGCAGAGTGCAGTC
GTGAACTATGGCCTCCAGGAGGAGAGCTATCTGCAGAGCAGATTCTTTTT
GCCCTACAACGAACAGGATGGCTTGGCGGCAGAGTGGAGATCGGCATTCG
TTTCCTATTTCCTCAAGCCGCCAGTTATGGCATTGGGAATGCTGATAAGT
GGCCTGGTCATCTCGAAGGCCAAGTTATCTGCTCGTAAAATCACCGGTAT
AAACATAGCCCTCAGTATACATCTGGTAGCGATTTTCATCGGCCTGATCT
TTGTCCAGTGCGATGTGGGCGCCATTGCTGGTGTGGAGGGTGGTAAGCTA
AAACAGCCCTATTGCTCCAGTCAGTGCCTATGCACACCCACTGCCTTCAT
GCCCGTGTGTCCGGAAAACAGTTCCGTCACCTACTTCTCGCCCTGCTACG
CGGGTTGCACCAAAAAGACCACCATCAATAGCTTTCAGTTGTTCGAGGGC
TGCAGCTGCAGCGGGGATCAGTCCTTGAATTCCACTGGTCAGATGAGGGC
AACCGCTGGAGCTTGCAGCTCCGACAATTGCCAGAGTGCCATCATCATCT
TCCAGATCATGAGCATTTCGGTGGCATTTCTAATGGGCGTCGGAGCCATA
GGAAAGACGTTGATCACACTGCGAGCTGTCCTGCCACAGGATAAGTCATT
GGCCCTGGCCTTTGAACTAATGATCGTGGGCCTTTTCGCCTATGTTCCAG
TGCATCTCAGCTACGACATTGTCACCCGTACAACCTGCGTTTACTGGGCA
CCCAACTACGAGCGCTGTCTGCTGCGAGAAACGCCGAAGCATGGCAACAT
CCTCGATATTCTCACAGCCTCATTGATCCTGGCCAGTGTGCTTTTCGACA
TACTCGTATACATATTCGCCAAAGGACTCAATCTTTACAACTGCAAGGTG
ACGGACAATAATTACACACCCTCTCTGTACGCACCAATTCCGCATGAGGA
TGCGACAACGTCGCCCAGTGCTCCACGTGGAGGAAGTCCAGTAACCACCA
CCACCACCTCATCGCCCATTCAACGCAGAGATGCCGCTCCAGAACCACGG
ACAGAGACAGCGGTATTCAGGAATCCCAGTTCGGTGACTACTTCATCGGG
TGGAGCACAGAGCATTGTGGAGCCCAGTGAGAGTGGGGTCACCTATGCAC
AAGTGGTCTTTCCACCAGACAGACGTAAGCCAGATGATGGTAGCACCAGT
CCCAAGCGGTTGGCCGTCCCAGCGAACGTACCATTGCATCTGCTCTCCGA
GTCGGACGTTCGCAGCCAGTTGGGCAACCTGAAGTCCTTCAATCCTCCCA
AACAGGAGGCGGACAGGGGTCTAGACACTGTAGACACCGACGATGTGGTG
GTCACCCAACCGCAGGTCCAAGCTGTGCTTCCGATAACCAGAGACCTTCA
TCCAAACCATCAACCGCAACCTGAGAGTCCGAGGCCACAGAGCCCAGAAA
CGGACTTCGCAAGCTTTCTAGACCAT

BO11815.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
Oatp33Eb-RA 2445 CG6417-PA 1..2442 17..2458 12210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:05:46
Subject Length Description Subject Range Query Range Score Percent Strand
Oatp33Eb-RA 2743 CG6417-RA 179..2620 17..2458 12210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12449832..12451131 430..1729 6500 100 Plus
2L 23513712 2L 12451194..12451924 1728..2458 3655 100 Plus
2L 23513712 2L 12448806..12448995 83..272 950 100 Plus
2L 23513712 2L 12449596..12449753 272..429 790 100 Plus
2L 23513712 2L 12448662..12448728 17..83 335 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:05:44 has no hits.

BO11815.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:59:09 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 1..2445 17..2462 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:30:33 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 177..2618 17..2460 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:53:09 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 179..2620 17..2460 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:59:09 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 177..2621 17..2462 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:47 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
Oatp33Eb-RA 179..2620 17..2460 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:47 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12448662..12448728 17..83 100 -> Plus
2L 12448807..12448995 84..272 100 -> Plus
2L 12449597..12449753 273..429 100 -> Plus
2L 12449832..12451129 430..1727 100 -> Plus
2L 12451194..12451924 1728..2460 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:53:09 Download gff for BO11815.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12448662..12448728 17..83 100 -> Plus
arm_2L 12448807..12448995 84..272 100 -> Plus
arm_2L 12449597..12449753 273..429 100 -> Plus
arm_2L 12449832..12451129 430..1727 100 -> Plus
arm_2L 12451194..12451924 1728..2460 99   Plus

BO11815.pep Sequence

Translation from 16 to 2476

> BO11815.pep
MAHNTRNSDLSQIAVNANNIPDDSVDCGIKGLGWCRGPGCQKYARLRTFI
LVLAISGTLQGACESYFRVSAKQASFQFGWNPLIVDWLLVASGLFQAVFA
LAFAYWADVYHPIKWLVGTLMLQAVTCVVAVIPSIMNFADGNQAKDALLD
ANMCATSLAQFQRLTLTEAQSSSLTLAMLFVLQLALGMGGLAYYTLGVSY
IDDNSLSQDSPAVIGAALAARVFGQQAGSFLVLGVGLTHVGWWLGWVILA
PFIFVGAVLLGLFPKRLPKTVIHQAAQRIIEQSSMRRFGSQFSTYMDDSD
FWPSLKRLFNNRLLMFNLLSIMCVQSAVVNYGLQEESYLQSRFFLPYNEQ
DGLAAEWRSAFVSYFLKPPVMALGMLISGLVISKAKLSARKITGINIALS
IHLVAIFIGLIFVQCDVGAIAGVEGGKLKQPYCSSQCLCTPTAFMPVCPE
NSSVTYFSPCYAGCTKKTTINSFQLFEGCSCSGDQSLNSTGQMRATAGAC
SSDNCQSAIIIFQIMSISVAFLMGVGAIGKTLITLRAVLPQDKSLALAFE
LMIVGLFAYVPVHLSYDIVTRTTCVYWAPNYERCLLRETPKHGNILDILT
ASLILASVLFDILVYIFAKGLNLYNCKVTDNNYTPSLYAPIPHEDATTSP
SAPRGGSPVTTTTTSSPIQRRDAAPEPRTETAVFRNPSSVTTSSGGAQSI
VEPSESGVTYAQVVFPPDRRKPDDGSTSPKRLAVPANVPLHLLSESDVRS
QLGNLKSFNPPKQEADRGLDTVDTDDVVVTQPQVQAVLPITRDLHPNHQP
QPESPRPQSPETDFASFLDH

BO11815.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
Oatp33Eb-PA 814 CG6417-PA 1..814 1..814 4214 100 Plus
Oatp58Db-PB 680 CG3382-PB 36..652 31..625 511 25.1 Plus
Oatp58Dc-PC 789 CG3380-PC 89..764 22..625 461 23.4 Plus
Oatp58Dc-PB 789 CG3380-PB 89..764 22..625 461 23.4 Plus
Oatp58Dc-PA 789 CG3380-PA 89..764 22..625 461 23.4 Plus