Clone Sequence Records
BO11822.3prime Sequence
395 bp (394 high quality bases) assembled on 2006-04-19
> BO11822.3prime
ATGGTCTAGAAAGCTTGCGTGTCCCTCGTGCTTTGCTCTGTAGATGCCTT
GGGGATCGTACTTGTTCAGGAGGAGCTTCCATTCGCCGGCTTTGTTGGCG
CGAAGGTAGTTGATTACCTTTTGTGAGTTTTTGCGTTGGACTTCCGTGCA
CTTTGAGCAGTCGGAATGAAGGGCGTCGGGTAAAAGGCGCTTAAGTTCAC
GACCCTCTGCTGTGCATGGGCCCTTGTCCATCAGGCACTTGAGATAATTA
CCCAACACTCGGTTGTTGCCCAGAACTTCATCCACGTTGACACTGTCGTA
CTTGTTGGTGTAGGTTTTTTCAGGAGCAGCTGCCGCAAGACCGACACAAA
CACAGAACACTAGAGCTAGCGAGGCTTTCATGTCGACTGATAACT
BO11822.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9358-PA | 366 | Phk-3-RA | 1..363 | 381..19 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 20:16:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 718 | CG9358-RC | 257..619 | 381..19 | 1815 | 100 | Minus |
Phk-3-RB | 635 | CG9358-RB | 174..536 | 381..19 | 1815 | 100 | Minus |
Phk-3-RA | 546 | CG9358-RA | 85..447 | 381..19 | 1815 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 20:16:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24970942..24971304 | 19..381 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 20:16:28 has no hits.
BO11822.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:45 Download gff for
BO11822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-PA | 1..366 | 16..381 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:55 Download gff for
BO11822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9358-PA | 1..366 | 16..381 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 11:38:14 Download gff for
BO11822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..457 | 10..381 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 22:51:02 Download gff for
BO11822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..457 | 10..381 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 22:51:02 Download gff for
BO11822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24970932..24971304 | 10..381 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 11:38:14 Download gff for
BO11822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20858455..20858827 | 10..381 | 98 | <- | Plus |
BO11822.5prime Sequence
395 bp (394 high quality bases) assembled on 2006-04-19
> BO11822.5prime
GAAGTTATCAGTCGACATGAAAGCCTCGCTAGCTCTAGTGTTCTGTGTTT
GTGTCGGTCTTGCGGCAGCTGCTCCTGAAAAAACCTACACCAACAAGTAC
GACAGTGTCAACGTGGATGAAGTTCTGGGCAACAACCGAGTGTTGGGTAA
TTATCTCAAGTGCCTGATGGACAAGGGCCCATGCACAGCAGAGGGTCGTG
AACTTAAGCGCCTTTTACCCGACGCCCTTCATTCCGACTGCTCAAAGTGC
ACGGAAGTCCAACGCAAAAACTCACAAAAGGTAATCAACTACCTTCGCGC
CAACAAAGCCGGCGAATGGAAGCTCCTCCTGAACAAGTACGATCCCCAAG
GCATCTACAGAGCAAAGCACGAGGGACACGCAAGCTTTCTAGACC
BO11822.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9358-PA | 366 | Phk-3-RA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:22:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 718 | CG9358-RC | 257..619 | 17..379 | 1815 | 100 | Plus |
Phk-3-RB | 635 | CG9358-RB | 174..536 | 17..379 | 1815 | 100 | Plus |
Phk-3-RA | 546 | CG9358-RA | 85..447 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:22:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24970942..24971304 | 379..17 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:22:37 has no hits.
BO11822.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:17:47 Download gff for
BO11822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-PA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:45:57 Download gff for
BO11822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9358-PA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:23:08 Download gff for
BO11822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..457 | 17..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:18:22 Download gff for
BO11822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..457 | 17..388 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:18:22 Download gff for
BO11822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24970932..24971304 | 17..388 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:23:08 Download gff for
BO11822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20858455..20858827 | 17..388 | 98 | <- | Minus |
BO11822.complete Sequence
397 bp assembled on 2006-10-11
GenBank Submission: FJ632208
> BO11822.complete
GAAGTTATCAGTCGACATGAAAGCCTCGCTAGCTCTAGTGTTCTGTGTTT
GTGTCGGTCTTGCGGCAGCTGCTCCTGAAAAAACCTACACCAACAAGTAC
GACAGTGTCAACGTGGATGAAGTTCTGGGCAACAACCGAGTGTTGGGTAA
TTATCTCAAGTGCCTGATGGACAAGGGCCCATGCACAGCAGAGGGTCGTG
AACTTAAGCGCCTTTTACCCGACGCCCTTCATTCCGACTGCTCAAAGTGC
ACGGAAGTCCAACGCAAAAACTCACAAAAGGTAATCAACTACCTTCGCGC
CAACAAAGCCGGCGAATGGAAGCTCCTCCTGAACAAGTACGATCCCCAAG
GCATCTACAGAGCAAAGCACGAGGGACACGCAAGCTTTCTAGACCAT
BO11822.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 366 | CG9358-PC | 1..363 | 17..379 | 1815 | 100 | Plus |
Phk-3-RB | 366 | CG9358-PB | 1..363 | 17..379 | 1815 | 100 | Plus |
Phk-3-RA | 366 | CG9358-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-RC | 718 | CG9358-RC | 257..619 | 17..379 | 1815 | 100 | Plus |
Phk-3-RB | 635 | CG9358-RB | 174..536 | 17..379 | 1815 | 100 | Plus |
Phk-3-RA | 546 | CG9358-RA | 85..447 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24970942..24971304 | 379..17 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:54:50 has no hits.
BO11822.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:49:29 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:23 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 82..454 | 17..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:25 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..447 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:49:29 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 82..454 | 17..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:57 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Phk-3-RA | 85..447 | 17..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:57 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24970939..24971304 | 17..381 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:25 Download gff for
BO11822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20858462..20858827 | 17..381 | 99 | | Minus |
BO11822.pep Sequence
Translation from 16 to 397
> BO11822.pep
MKASLALVFCVCVGLAAAAPEKTYTNKYDSVNVDEVLGNNRVLGNYLKCL
MDKGPCTAEGRELKRLLPDALHSDCSKCTEVQRKNSQKVINYLRANKAGE
WKLLLNKYDPQGIYRAKHEGHASFLDH
BO11822.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Phk-3-PC | 121 | CG9358-PC | 1..121 | 1..121 | 646 | 100 | Plus |
Phk-3-PB | 121 | CG9358-PB | 1..121 | 1..121 | 646 | 100 | Plus |
Phk-3-PA | 121 | CG9358-PA | 1..121 | 1..121 | 646 | 100 | Plus |
PebIII-PC | 126 | CG11390-PC | 1..119 | 1..122 | 336 | 54.1 | Plus |
PebIII-PB | 126 | CG11390-PB | 1..119 | 1..122 | 336 | 54.1 | Plus |