Clone BO11851 Report

Search the DGRC for BO11851

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:118
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG15643-RA
Protein status:BO11851.pep: validated full length
Sequenced Size:670

Clone Sequence Records

BO11851.3prime Sequence

668 bp (667 high quality bases) assembled on 2006-04-19

> BO11851.3prime
ATGGTCTAGAAAGCTTGCCTGGGGCGCAACATCACGCTGGGATTCGTGCG
CATCGGTTAGACCATAACAATGCTTGGCCGCCGGATCGCGGTACTTGTTC
TCGTGCTCCACGGAGTGCGAGTTCGTGCGGCACTTGACCAGGCACAGCTC
GAAGTGGTCCGTCACGCTGGCGAAGATGTACTTGGGCGTGTTGGGCGCCT
GCAGGACGCGCTCCAGCAGCGGCTGTTGTCCGGGGTGCAGGCAGCAGGAG
ACGCAATACTCATAAACACCGCAACAGTGGGTGCTGGTATTGCATGTGCG
GCAGCTGTAGTATCCAATGCCGGGCAGCTCCAGGTTGCAGCAGCCGTTGG
TTAGCACCTCCTCGCGTCGGCACACGAATCCTCGCTCGTCCGCCAGCCAT
TGGCGGCCCTGGACAGAGTTGCGGCAGCGTGCCTCGGGATCGCCGCGCGT
GCGATTGAGCTGCTCCTCCGGCGCCAGAAGCTGCTGCGTCCACAGGAGCG
GTCGTGTGCGCTGCACCACATACTCGTCATAGTGCAGGCCGGAAAACGAG
TCCCGATCGAAAATGTGTCCGAATCCGTAGATGAGCAGCAGTACCACCAG
CACGATGTACACAATCCGGCGTCTCAGCAGGCGTGTCAGGGCGGCTGGCC
ACATGTCGACTGATAACT

BO11851.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-PA 639 CG15643-RA 1..636 654..19 3180 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 1411 CG15643-RB 485..1120 654..19 3180 100 Minus
CG15643-RA 1692 CG15643-RA 485..1120 654..19 3180 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15570952..15571486 19..553 2675 100 Plus
X 23542271 X 15571563..15571665 552..654 515 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:46:48 has no hits.

BO11851.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:18:35 Download gff for BO11851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 16..654 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:47:06 Download gff for BO11851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 16..654 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:12:20 Download gff for BO11851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 13..662 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:43:10 Download gff for BO11851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 13..662 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:43:10 Download gff for BO11851.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15570945..15571485 14..552 99 <- Plus
X 15571564..15571669 553..662 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:12:20 Download gff for BO11851.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15464978..15465518 14..552 99 <- Plus
arm_X 15465597..15465702 553..662 96   Plus

BO11851.5prime Sequence

668 bp (667 high quality bases) assembled on 2006-04-19

> BO11851.5prime
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGGCAAGCTTTCTAGACC

BO11851.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-PA 639 CG15643-RA 1..636 17..652 3180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:51:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 1411 CG15643-RB 485..1120 17..652 3180 100 Plus
CG15643-RA 1692 CG15643-RA 485..1120 17..652 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15570952..15571486 652..118 2675 100 Minus
X 23542271 X 15571563..15571665 119..17 515 100 Minus
Blast to na_te.dros performed on 2015-02-10 20:51:15 has no hits.

BO11851.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:18:36 Download gff for BO11851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 17..655 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:47:08 Download gff for BO11851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 17..655 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 04:02:00 Download gff for BO11851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 9..658 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:29:16 Download gff for BO11851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 9..658 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:29:16 Download gff for BO11851.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15570945..15571485 119..657 99 <- Minus
X 15571564..15571669 9..118 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 04:02:00 Download gff for BO11851.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15464978..15465518 119..657 99 <- Minus
arm_X 15465597..15465702 9..118 96   Minus

BO11851.complete Sequence

670 bp assembled on 2006-10-11

GenBank Submission: FJ632218

> BO11851.complete
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGGCAAGCTTTCTAGACCAT

BO11851.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 639 CG15643-PB 1..636 17..652 3180 100 Plus
CG15643-RA 639 CG15643-PA 1..636 17..652 3180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 1411 CG15643-RB 485..1120 17..652 3180 100 Plus
CG15643-RA 1692 CG15643-RA 485..1120 17..652 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:01:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15570952..15571486 652..118 2675 100 Minus
X 23542271 X 15571563..15571665 119..17 515 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:01:09 has no hits.

BO11851.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:27 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 1..639 17..655 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:31:32 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 434..1078 9..658 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:00 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 485..1120 17..654 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:27 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 434..1078 9..658 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:48:45 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 485..1120 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:48:45 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
X 15570949..15571485 119..654 99 <- Minus
X 15571564..15571665 17..118 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:00 Download gff for BO11851.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15464982..15465518 119..654 99 <- Minus
arm_X 15465597..15465698 17..118 100   Minus

BO11851.pep Sequence

Translation from 16 to 670

> BO11851.pep
MWPAALTRLLRRRIVYIVLVVLLLIYGFGHIFDRDSFSGLHYDEYVVQRT
RPLLWTQQLLAPEEQLNRTRGDPEARCRNSVQGRQWLADERGFVCRREEV
LTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERV
LQAPNTPKYIFASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYGLT
DAHESQRDVAPQASFLDH

BO11851.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-PB 212 CG15643-PB 1..212 1..212 1173 100 Plus
CG15643-PA 212 CG15643-PA 1..212 1..212 1173 100 Plus