Clone Sequence Records
BO11851.3prime Sequence
668 bp (667 high quality bases) assembled on 2006-04-19
> BO11851.3prime
ATGGTCTAGAAAGCTTGCCTGGGGCGCAACATCACGCTGGGATTCGTGCG
CATCGGTTAGACCATAACAATGCTTGGCCGCCGGATCGCGGTACTTGTTC
TCGTGCTCCACGGAGTGCGAGTTCGTGCGGCACTTGACCAGGCACAGCTC
GAAGTGGTCCGTCACGCTGGCGAAGATGTACTTGGGCGTGTTGGGCGCCT
GCAGGACGCGCTCCAGCAGCGGCTGTTGTCCGGGGTGCAGGCAGCAGGAG
ACGCAATACTCATAAACACCGCAACAGTGGGTGCTGGTATTGCATGTGCG
GCAGCTGTAGTATCCAATGCCGGGCAGCTCCAGGTTGCAGCAGCCGTTGG
TTAGCACCTCCTCGCGTCGGCACACGAATCCTCGCTCGTCCGCCAGCCAT
TGGCGGCCCTGGACAGAGTTGCGGCAGCGTGCCTCGGGATCGCCGCGCGT
GCGATTGAGCTGCTCCTCCGGCGCCAGAAGCTGCTGCGTCCACAGGAGCG
GTCGTGTGCGCTGCACCACATACTCGTCATAGTGCAGGCCGGAAAACGAG
TCCCGATCGAAAATGTGTCCGAATCCGTAGATGAGCAGCAGTACCACCAG
CACGATGTACACAATCCGGCGTCTCAGCAGGCGTGTCAGGGCGGCTGGCC
ACATGTCGACTGATAACT
BO11851.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-PA | 639 | CG15643-RA | 1..636 | 654..19 | 3180 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:46:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 1411 | CG15643-RB | 485..1120 | 654..19 | 3180 | 100 | Minus |
CG15643-RA | 1692 | CG15643-RA | 485..1120 | 654..19 | 3180 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:46:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15570952..15571486 | 19..553 | 2675 | 100 | Plus |
X | 23542271 | X | 15571563..15571665 | 552..654 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:46:48 has no hits.
BO11851.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:18:35 Download gff for
BO11851.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 16..654 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:47:06 Download gff for
BO11851.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 16..654 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:12:20 Download gff for
BO11851.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 13..662 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:43:10 Download gff for
BO11851.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 13..662 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:43:10 Download gff for
BO11851.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15570945..15571485 | 14..552 | 99 | <- | Plus |
X | 15571564..15571669 | 553..662 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:12:20 Download gff for
BO11851.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15464978..15465518 | 14..552 | 99 | <- | Plus |
arm_X | 15465597..15465702 | 553..662 | 96 | | Plus |
BO11851.5prime Sequence
668 bp (667 high quality bases) assembled on 2006-04-19
> BO11851.5prime
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGGCAAGCTTTCTAGACC
BO11851.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-PA | 639 | CG15643-RA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:51:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 1411 | CG15643-RB | 485..1120 | 17..652 | 3180 | 100 | Plus |
CG15643-RA | 1692 | CG15643-RA | 485..1120 | 17..652 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:51:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15570952..15571486 | 652..118 | 2675 | 100 | Minus |
X | 23542271 | X | 15571563..15571665 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:51:15 has no hits.
BO11851.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:18:36 Download gff for
BO11851.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 17..655 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:47:08 Download gff for
BO11851.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 17..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 04:02:00 Download gff for
BO11851.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 9..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:29:16 Download gff for
BO11851.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 9..658 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:29:16 Download gff for
BO11851.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15570945..15571485 | 119..657 | 99 | <- | Minus |
X | 15571564..15571669 | 9..118 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 04:02:00 Download gff for
BO11851.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15464978..15465518 | 119..657 | 99 | <- | Minus |
arm_X | 15465597..15465702 | 9..118 | 96 | | Minus |
BO11851.complete Sequence
670 bp assembled on 2006-10-11
GenBank Submission: FJ632218
> BO11851.complete
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGGCAAGCTTTCTAGACCAT
BO11851.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 639 | CG15643-PB | 1..636 | 17..652 | 3180 | 100 | Plus |
CG15643-RA | 639 | CG15643-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 1411 | CG15643-RB | 485..1120 | 17..652 | 3180 | 100 | Plus |
CG15643-RA | 1692 | CG15643-RA | 485..1120 | 17..652 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:01:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15570952..15571486 | 652..118 | 2675 | 100 | Minus |
X | 23542271 | X | 15571563..15571665 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:01:09 has no hits.
BO11851.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:27 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 1..639 | 17..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:31:32 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 434..1078 | 9..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:00 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 485..1120 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:27 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 434..1078 | 9..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:48:45 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 485..1120 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:48:45 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15570949..15571485 | 119..654 | 99 | <- | Minus |
X | 15571564..15571665 | 17..118 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:00 Download gff for
BO11851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15464982..15465518 | 119..654 | 99 | <- | Minus |
arm_X | 15465597..15465698 | 17..118 | 100 | | Minus |
BO11851.pep Sequence
Translation from 16 to 670
> BO11851.pep
MWPAALTRLLRRRIVYIVLVVLLLIYGFGHIFDRDSFSGLHYDEYVVQRT
RPLLWTQQLLAPEEQLNRTRGDPEARCRNSVQGRQWLADERGFVCRREEV
LTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERV
LQAPNTPKYIFASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYGLT
DAHESQRDVAPQASFLDH
BO11851.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-PB | 212 | CG15643-PB | 1..212 | 1..212 | 1173 | 100 | Plus |
CG15643-PA | 212 | CG15643-PA | 1..212 | 1..212 | 1173 | 100 | Plus |