Clone Sequence Records
BO11962.5prime Sequence
826 bp (823 high quality bases) assembled on 2006-04-19
> BO11962.5prime
GAAGTTATCAGTCGACATGCTCGTCAAGTTGTGCGCTATCCTTTTGGCCC
TTGGCCTTAGTCAGGCCATTGCGTATCCGCCCCTGCAACTTAGTAATCCG
CACCAGAACCTAGTGCAGTTCCTGATACAATCACGTGATCTCGGCAACGA
TGGTGGACATACCCTTGAATGCTTGGATTATTATCTTCCCCTGCTGAACG
ACGTTGTGGAGACCTACAAGGCTGATTTAAATGCGTGTTTGGAAACAGCT
AGTCAGGAGGTCTCACAGATCAACGACAATACCAAGGAAGAACGAGATGC
CATCGATGCCTCAGCCAAGAGCTCCTGCGATGCCCTCACCGCATGTAGTA
CAAAGGAAGCGGCCATAGATTACTTCCAGTGCTACAGTGAAGCCGGCTCC
AACAACACCAAAACCATGTTCACCATCTCCGCTAACGCTTCGGAGCTGCT
GGCTGCTGTGGAGGAGGAAGTGCGTCTCATCAAGGTGAAGGAAGAGGTGT
GCACCAACAAGACCCAGAGGGCCTATGGAGAGAGCTACGGTCAGCTGTAC
GCGGATTTGGGTGATTGCATTGCTGGCGCTCCAATTCCATCGGAATCCAC
AAGCACCCAGGCCTCCTCCACGGATTCTTCGACTGATTCGACGTCCGCTT
CCACCGAATCCTCTACTGATTCGTCCTCCGTTTCCACCGAATCTTCTACT
GATTCGTCCTCCGTTTCCACCGAATCTTCTACTGATTCCTCGACTGATTC
TTCCTCCGCTTCCACCGAATCGTCTACTGATTCGTCCTCCGTCTCCACTG
AATCCTCAACGGATTCCTCAACTGAT
BO11962.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-PA | 1080 | CG10911-RA | 1..810 | 17..826 | 4050 | 100 | Plus |
| CG10911-PA | 1080 | CG10911-RA | 721..848 | 659..786 | 265 | 88.2 | Plus |
| CG10911-PA | 1080 | CG10911-RA | 805..887 | 698..780 | 190 | 89.1 | Plus |
| CG10911-PA | 1080 | CG10911-RA | 867..935 | 715..783 | 145 | 88.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:45:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-RA | 1221 | CG10911-RA | 61..870 | 17..826 | 4050 | 100 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 770..908 | 648..786 | 425 | 87.1 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 778..947 | 623..780 | 400 | 83.5 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 661..827 | 650..816 | 370 | 81.4 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 694..860 | 617..783 | 370 | 81.4 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 859..1022 | 659..810 | 335 | 81.1 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 692..792 | 726..826 | 310 | 87.1 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 667..749 | 734..816 | 265 | 88 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 946..1016 | 656..726 | 205 | 85.9 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 937..1016 | 614..693 | 205 | 83.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:45:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18052901..18053332 | 826..395 | 2160 | 100 | Minus |
| 2R | 25286936 | 2R | 18053628..18054006 | 395..17 | 1895 | 100 | Minus |
| 2R | 25286936 | 2R | 18052863..18053001 | 786..648 | 425 | 87.1 | Minus |
| 2R | 25286936 | 2R | 18052911..18053077 | 783..617 | 370 | 81.4 | Minus |
| 2R | 25286936 | 2R | 18052944..18053110 | 816..650 | 370 | 81.4 | Minus |
| 2R | 25286936 | 2R | 18052824..18052993 | 780..623 | 365 | 82.4 | Minus |
| 2R | 25286936 | 2R | 18052979..18053079 | 826..726 | 310 | 87.1 | Minus |
| 2R | 25286936 | 2R | 18052749..18052912 | 810..659 | 305 | 80.5 | Minus |
| 2R | 25286936 | 2R | 18053022..18053104 | 816..734 | 265 | 88 | Minus |
| 2R | 25286936 | 2R | 18052755..18052834 | 693..614 | 205 | 83.8 | Minus |
| 2R | 25286936 | 2R | 18052755..18052825 | 726..656 | 205 | 85.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:45:53 has no hits.
BO11962.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:21:53 Download gff for
BO11962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-PA | 1..810 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:51:48 Download gff for
BO11962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-PA | 1..810 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:46:37 Download gff for
BO11962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 61..870 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:20:53 Download gff for
BO11962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 61..870 | 17..826 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:20:53 Download gff for
BO11962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18052901..18053332 | 395..826 | 100 | <- | Minus |
| 2R | 18053629..18054006 | 17..394 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:46:37 Download gff for
BO11962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13940406..13940837 | 395..826 | 100 | <- | Minus |
| arm_2R | 13941134..13941511 | 17..394 | 100 | | Minus |
BO11962.3prime Sequence
704 bp (476 high quality bases) assembled on 2006-04-19
> BO11962.3prime
ATGGTCTAGAAAGCTTGCGTGATTTTTAAACCAAACCCGTAGATTCTTTA
GAATCTTCTGGAGGTCATTGCTGTTTTGAGAGGAGAGGGATTTCAAGTCC
TCCTCAGGCGCCGCTTCCTTTTCACCACTACTTGTTGTGGATTCCGTGGA
AACAGATGAGGAATCAGTAGAGGATTCGGTAGAATCGGAGGGCGAATCAG
ACGAGGATTCAGTAGAGGATTCGGTGGAAGCGGATGAGGAGTCTGTCGAC
GAATCAGTGGATGATTCGGTGGACACGGAGGACGAATCAGTTGAGGAATC
CGTTGAGGATTCAGTGGAGACGGAGGACGAATCAGTAGACGATTCGGTGG
AAGCGGAGGAAGAATCAGTCGAGGAATCAGTAGAAGATTCGGTGGAAACG
GAGGACGAATCAGTAGAAGATTCGGTGGAAACGGAGGACGAATCAGTAGA
GGATTCGGTGGAAGCGGACGTCGAATCAGTCGAAGAATCCGTGGAGGAGG
CCTGGGTGCTTGTGGATTCCGATGGAATTGGAGCGTCAGCAATGCAATCA
CCCAAATCCGCGTACAGCTGACCGTAGCTCTCTCCATAGGCCCTCTGGGT
CTTGTTGGTGCACACCTCTTCCTTCACCTTGATGAGACGCACTTCCTCCT
CTCCAGCAGCCAGCAGTCTCCGAAGCGTTAGCGGAGATGGTGAACATGGT
TTTG
BO11962.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-PA | 1080 | CG10911-RA | 430..1077 | 666..19 | 3165 | 99.5 | Minus |
| CG10911-PA | 1080 | CG10911-RA | 393..429 | 704..668 | 185 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:28:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-RA | 1221 | CG10911-RA | 453..1137 | 704..19 | 3360 | 99.4 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 661..962 | 462..149 | 515 | 78 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 694..1007 | 495..194 | 515 | 78 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 692..905 | 386..161 | 455 | 81 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 770..995 | 464..251 | 455 | 81 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 667..824 | 378..209 | 400 | 83.5 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 778..947 | 489..332 | 400 | 83.5 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 703..854 | 297..134 | 335 | 81.1 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 859..1022 | 453..302 | 335 | 81.1 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 937..1016 | 498..419 | 205 | 83.8 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 946..1016 | 456..386 | 205 | 85.9 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 658..737 | 219..140 | 205 | 83.8 | Minus |
| CG10911-RA | 1221 | CG10911-RA | 700..770 | 210..140 | 205 | 85.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18052634..18053318 | 19..704 | 3335 | 99.4 | Plus |
| 2R | 25286936 | 2R | 18052764..18053077 | 194..495 | 485 | 77.7 | Plus |
| 2R | 25286936 | 2R | 18052809..18053110 | 149..462 | 485 | 77.7 | Plus |
| 2R | 25286936 | 2R | 18052863..18053001 | 326..464 | 425 | 87.1 | Plus |
| 2R | 25286936 | 2R | 18052941..18053079 | 248..386 | 425 | 87.1 | Plus |
| 2R | 25286936 | 2R | 18052824..18052993 | 332..489 | 365 | 82.4 | Plus |
| 2R | 25286936 | 2R | 18052947..18053104 | 209..378 | 365 | 82.4 | Plus |
| 2R | 25286936 | 2R | 18052749..18052912 | 302..453 | 305 | 80.5 | Plus |
| 2R | 25286936 | 2R | 18052917..18053068 | 134..297 | 305 | 80.5 | Plus |
| 2R | 25286936 | 2R | 18052755..18052834 | 419..498 | 205 | 83.8 | Plus |
| 2R | 25286936 | 2R | 18052755..18052825 | 386..456 | 205 | 85.9 | Plus |
| 2R | 25286936 | 2R | 18053001..18053071 | 140..210 | 205 | 85.9 | Plus |
| 2R | 25286936 | 2R | 18053034..18053113 | 140..219 | 205 | 83.8 | Plus |
Blast to na_te.dros performed 2015-02-10 16:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fw3 | 3132 | Fw3 FW3 3132bp | 168..217 | 88..40 | 112 | 72 | Minus |
BO11962.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:21:52 Download gff for
BO11962.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-PA | 393..1080 | 15..704 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:51:47 Download gff for
BO11962.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-PA | 393..1080 | 15..704 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 12:55:20 Download gff for
BO11962.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 453..1146 | 9..704 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:01:28 Download gff for
BO11962.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 453..1146 | 9..704 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:28 Download gff for
BO11962.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18052625..18053318 | 9..704 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 12:55:20 Download gff for
BO11962.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13940130..13940823 | 9..704 | 98 | | Plus |
BO11962.complete Sequence
1111 bp assembled on 2006-10-11
GenBank Submission: FJ632261
> BO11962.complete
GAAGTTATCAGTCGACATGCTCGTCAAGTTGTGCGCTATCCTTTTGGCCC
TTGGCCTTAGTCAGGCCATTGCGTATCCGCCCCTGCAACTTAGTAATCCG
CACCAGAACCTAGTGCAGTTCCTGATACAATCACGTGATCTCGGCAACGA
TGGTGGACATACCCTTGAATGCTTGGATTATTATCTTCCCCTGCTGAACG
ACGTTGTGGAGACCTACAAGGCTGATTTAAATGCGTGTTTGGAAACAGCT
AGTCAGGAGGTCTCACAGATCAACGACAATACCAAGGAAGAACGAGATGC
CATCGATGCCTCAGCCAAGAGCTCCTGCGATGCCCTCACCGCATGTAGTA
CAAAGGAAGCGGCCATAGATTACTTCCAGTGCTACAGTGAAGCCGGCTCC
AACAACACCAAAACCATGTTCACCATCTCCGCTAACGCTTCGGAGCTGCT
GGCTGCTGTGGAGGAGGAAGTGCGTCTCATCAAGGTGAAGGAAGAGGTGT
GCACCAACAAGACCCAGAGGGCCTATGGAGAGAGCTACGGTCAGCTGTAC
GCGGATTTGGGTGATTGCATTGCTGGCGCTCCAATTCCATCGGAATCCAC
AAGCACCCAGGCCTCCTCCACGGATTCTTCGACTGATTCGACGTCCGCTT
CCACCGAATCCTCTACTGATTCGTCCTCCGTTTCCACCGAATCTTCTACT
GATTCGTCCTCCGTTTCCACCGAATCTTCTACTGATTCCTCGACTGATTC
TTCCTCCGCTTCCACCGAATCGTCTACTGATTCGTCCTCCGTCTCCACTG
AATCCTCAACGGATTCCTCAACTGATTCGTCCTCCGTGTCCACCGAATCA
TCCACTGATTCGTCGACAGACTCCTCATCCGCTTCCACCGAATCCTCTAC
TGAATCCTCGTCTGATTCGCCCTCCGATTCTACCGAATCCTCTACTGATT
CCTCATCTGTTTCCACGGAATCCACAACAAGTAGTGGTGAAAAGGAAGCG
GCGCCTGAGGAGGACTTGAAATCCCTCTCCTCTCAAAACAGCAATGACCT
CCAGAAGATTCTAAAGAATCTACGGGTTTGGTTTAAAAATCACGCAAGCT
TTCTAGACCAT
BO11962.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-RA | 1080 | CG10911-PA | 1..1077 | 17..1093 | 5385 | 100 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 601..902 | 650..963 | 485 | 77.7 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 634..947 | 617..918 | 485 | 77.7 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 632..770 | 726..864 | 425 | 87.1 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 710..848 | 648..786 | 425 | 87.1 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 607..764 | 734..903 | 365 | 82.4 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 718..887 | 623..780 | 365 | 82.4 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 643..794 | 815..978 | 305 | 80.5 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 799..962 | 659..810 | 305 | 80.5 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 598..677 | 893..972 | 205 | 83.8 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 640..710 | 902..972 | 205 | 85.9 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 877..956 | 614..693 | 205 | 83.8 | Plus |
| CG10911-RA | 1080 | CG10911-PA | 886..956 | 656..726 | 205 | 85.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:10:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-RA | 1221 | CG10911-RA | 61..1137 | 17..1093 | 5385 | 100 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 661..962 | 650..963 | 485 | 77.7 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 694..1007 | 617..918 | 485 | 77.7 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 692..830 | 726..864 | 425 | 87.1 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 770..908 | 648..786 | 425 | 87.1 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 667..824 | 734..903 | 365 | 82.4 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 778..947 | 623..780 | 365 | 82.4 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 703..854 | 815..978 | 305 | 80.5 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 859..1022 | 659..810 | 305 | 80.5 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 946..1016 | 656..726 | 205 | 85.9 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 658..737 | 893..972 | 205 | 83.8 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 700..770 | 902..972 | 205 | 85.9 | Plus |
| CG10911-RA | 1221 | CG10911-RA | 937..1016 | 614..693 | 205 | 83.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:10:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18052634..18053332 | 1093..395 | 3495 | 100 | Minus |
| 2R | 25286936 | 2R | 18053628..18054006 | 395..17 | 1895 | 100 | Minus |
| 2R | 25286936 | 2R | 18052764..18053077 | 918..617 | 485 | 77.7 | Minus |
| 2R | 25286936 | 2R | 18052809..18053110 | 963..650 | 485 | 77.7 | Minus |
| 2R | 25286936 | 2R | 18052863..18053001 | 786..648 | 425 | 87.1 | Minus |
| 2R | 25286936 | 2R | 18052941..18053079 | 864..726 | 425 | 87.1 | Minus |
| 2R | 25286936 | 2R | 18052824..18052993 | 780..623 | 365 | 82.4 | Minus |
| 2R | 25286936 | 2R | 18052947..18053104 | 903..734 | 365 | 82.4 | Minus |
| 2R | 25286936 | 2R | 18052749..18052912 | 810..659 | 305 | 80.5 | Minus |
| 2R | 25286936 | 2R | 18052917..18053068 | 978..815 | 305 | 80.5 | Minus |
| 2R | 25286936 | 2R | 18053034..18053113 | 972..893 | 205 | 83.8 | Minus |
| 2R | 25286936 | 2R | 18052755..18052834 | 693..614 | 205 | 83.8 | Minus |
| 2R | 25286936 | 2R | 18052755..18052825 | 726..656 | 205 | 85.9 | Minus |
| 2R | 25286936 | 2R | 18053001..18053071 | 972..902 | 205 | 85.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:10:49 has no hits.
BO11962.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:55:51 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 1..1080 | 17..1097 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:06:15 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 59..1144 | 17..1103 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:19:25 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 61..1137 | 17..1095 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:55:51 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 59..1144 | 17..1103 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:31 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10911-RA | 61..1137 | 17..1095 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:31 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18052632..18053332 | 395..1095 | 99 | <- | Minus |
| 2R | 18053629..18054006 | 17..394 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:19:25 Download gff for
BO11962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13941134..13941511 | 17..394 | 100 | | Minus |
| arm_2R | 13940137..13940837 | 395..1095 | 99 | <- | Minus |
BO11962.pep Sequence
Translation from 16 to 1111
> BO11962.pep
MLVKLCAILLALGLSQAIAYPPLQLSNPHQNLVQFLIQSRDLGNDGGHTL
ECLDYYLPLLNDVVETYKADLNACLETASQEVSQINDNTKEERDAIDASA
KSSCDALTACSTKEAAIDYFQCYSEAGSNNTKTMFTISANASELLAAVEE
EVRLIKVKEEVCTNKTQRAYGESYGQLYADLGDCIAGAPIPSESTSTQAS
STDSSTDSTSASTESSTDSSSVSTESSTDSSSVSTESSTDSSTDSSSAST
ESSTDSSSVSTESSTDSSTDSSSVSTESSTDSSTDSSSASTESSTESSSD
SPSDSTESSTDSSSVSTESTTSSGEKEAAPEEDLKSLSSQNSNDLQKILK
NLRVWFKNHASFLDH
BO11962.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:39:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10911-PA | 359 | CG10911-PA | 1..359 | 1..359 | 1762 | 100 | Plus |
| CG42525-PA | 419 | CG42525-PA | 76..320 | 98..344 | 330 | 41.2 | Plus |
| CG42525-PB | 377 | CG42525-PB | 87..252 | 194..344 | 321 | 57.6 | Plus |
| CG42525-PB | 377 | CG42525-PB | 111..278 | 192..344 | 320 | 56.4 | Plus |
| CG42525-PB | 377 | CG42525-PB | 98..261 | 192..340 | 316 | 57.1 | Plus |
| CG42525-PA | 419 | CG42525-PA | 60..354 | 52..332 | 314 | 35.8 | Plus |
| CG42525-PB | 377 | CG42525-PB | 76..312 | 98..332 | 312 | 40.2 | Plus |
| CG42525-PB | 377 | CG42525-PB | 66..230 | 184..344 | 291 | 50.3 | Plus |
| CG5767-PA | 253 | CG5767-PA | 4..253 | 5..256 | 287 | 26.7 | Plus |
| CG42525-PB | 377 | CG42525-PB | 60..311 | 52..312 | 280 | 32.8 | Plus |
| CG10912-PA | 271 | CG10912-PA | 5..255 | 5..257 | 273 | 30.2 | Plus |
| CG42525-PA | 419 | CG42525-PA | 146..377 | 83..306 | 210 | 29.5 | Plus |
