Clone Sequence Records
BO12025.3prime Sequence
491 bp (490 high quality bases) assembled on 2006-04-18
> BO12025.3prime
ATGGTCTAGAAAGCTTGCATAATGGGTCTCGGTGATCCTGACCTTTCCGT
ACTTTCCGTGCAGGGCGTGCTTGGCGAAGGACAGGAGGTTCGAGTGGCTG
TGGACATCGAAGTGGGCCGGGGTACTGTGATGCACCACGGCGGCGTGGGT
GTCATGGTGATGATGGTGCACCACCGGAGCGGAGTGCAGGCGAGCGTAGT
GGTAGTGAAGTGGCTCATGGTGGTACACTGTGGTTGGCAGCGACTCAACC
AGGTGGTGATCCAAATGATGATCCAAATGATGGTTCAGATGGTGATCATC
GTGCACCAAAGCGGCACTGTGTCCCAGATGGATGCCATCCGAATGATGGA
TCTCAGCGTCCAGCAGATGAGGCAGTTCCTCATGGTGGTAACCATGATGG
CTATCCACATGGGGCAGAAGACCTGGGGCAGCCTGGGCCACAGCCAGCAC
AGCCAAGATGCACACGAAGAACTTCATGTCGACTGATAACT
BO12025.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-PA | 462 | CG14147-RA | 1..459 | 477..19 | 2295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:53:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-RA | 761 | CG14147-RA | 91..549 | 477..19 | 2295 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10972810..10973264 | 473..19 | 2275 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:53:35 has no hits.
BO12025.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:23:44 Download gff for
BO12025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-PA | 1..462 | 16..477 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:54:22 Download gff for
BO12025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-PA | 1..462 | 16..477 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:56:57 Download gff for
BO12025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 81..558 | 11..487 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:28:10 Download gff for
BO12025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 81..558 | 11..487 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:28:10 Download gff for
BO12025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10972806..10973273 | 11..477 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:56:57 Download gff for
BO12025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10965906..10966373 | 11..477 | 98 | | Minus |
BO12025.5prime Sequence
491 bp (490 high quality bases) assembled on 2006-04-18
> BO12025.5prime
GAAGTTATCAGTCGACATGAAGTTCTTCGTGTGCATCTTGGCTGTGCTGG
CTGTGGCCCAGGCTGCCCCAGGTCTTCTGCCCCATGTGGATAGCCATCAT
GGTTACCACCATGAGGAACTGCCTCATCTGCTGGACGCTGAGATCCATCA
TTCGGATGGCATCCATCTGGGACACAGTGCCGCTTTGGTGCACGATGATC
ACCATCTGAACCATCATTTGGATCATCATTTGGATCACCACCTGGTTGAG
TCGCTGCCAACCACAGTGTACCACCATGAGCCACTTCACTACCACTACGC
TCGCCTGCACTCCGCTCCGGTGGTGCACCATCATCACCATGACACCCACG
CCGCCGTGGTGCATCACAGTACCCCGGCCCACTTCGATGTCCACAGCCAC
TCGAACCTCCTGTCCTTCGCCAAGCACGCCCTGCACGGAAAGTACGGAAA
GGTCAGGATCACCGAGACCCATTATGCAAGCTTTCTAGACC
BO12025.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-PA | 462 | CG14147-RA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-RA | 761 | CG14147-RA | 91..549 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:56:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10972810..10973264 | 21..475 | 2275 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:57:00 has no hits.
BO12025.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:23:45 Download gff for
BO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-PA | 1..462 | 17..478 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:54:23 Download gff for
BO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-PA | 1..462 | 17..478 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 04:03:36 Download gff for
BO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 81..558 | 7..483 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:34:02 Download gff for
BO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 81..558 | 7..483 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:34:02 Download gff for
BO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10972806..10973273 | 17..483 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 04:03:36 Download gff for
BO12025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10965906..10966373 | 17..483 | 98 | | Plus |
BO12025.complete Sequence
493 bp assembled on 2006-10-11
GenBank Submission: FJ632284
> BO12025.complete
GAAGTTATCAGTCGACATGAAGTTCTTCGTGTGCATCTTGGCTGTGCTGG
CTGTGGCCCAGGCTGCCCCAGGTCTTCTGCCCCATGTGGATAGCCATCAT
GGTTACCACCATGAGGAACTGCCTCATCTGCTGGACGCTGAGATCCATCA
TTCGGATGGCATCCATCTGGGACACAGTGCCGCTTTGGTGCACGATGATC
ACCATCTGAACCATCATTTGGATCATCATTTGGATCACCACCTGGTTGAG
TCGCTGCCAACCACAGTGTACCACCATGAGCCACTTCACTACCACTACGC
TCGCCTGCACTCCGCTCCGGTGGTGCACCATCATCACCATGACACCCACG
CCGCCGTGGTGCATCACAGTACCCCGGCCCACTTCGATGTCCACAGCCAC
TCGAACCTCCTGTCCTTCGCCAAGCACGCCCTGCACGGAAAGTACGGAAA
GGTCAGGATCACCGAGACCCATTATGCAAGCTTTCTAGACCAT
BO12025.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:48:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-RA | 462 | CG14147-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-RA | 761 | CG14147-RA | 91..549 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:48:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10972810..10973264 | 21..475 | 2275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:48:36 has no hits.
BO12025.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:57 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 1..462 | 17..478 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:27:16 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 75..552 | 7..483 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:21 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 91..549 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:57 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 75..552 | 7..483 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:02 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 91..549 | 17..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:02 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10972806..10973264 | 17..477 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:21 Download gff for
BO12025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10965906..10966364 | 17..477 | 99 | | Plus |
BO12025.pep Sequence
Translation from 16 to 493
> BO12025.pep
MKFFVCILAVLAVAQAAPGLLPHVDSHHGYHHEELPHLLDAEIHHSDGIH
LGHSAALVHDDHHLNHHLDHHLDHHLVESLPTTVYHHEPLHYHYARLHSA
PVVHHHHHDTHAAVVHHSTPAHFDVHSHSNLLSFAKHALHGKYGKVRITE
THYASFLDH
BO12025.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-PA | 153 | CG14147-PA | 1..153 | 1..153 | 870 | 100 | Plus |
