Clone BO12115 Report

Search the DGRC for BO12115

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:121
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG10598-RA
Protein status:BO12115.pep: Imported from assembly
Sequenced Size:554

Clone Sequence Records

BO12115.3prime Sequence

552 bp (551 high quality bases) assembled on 2006-04-20

> BO12115.3prime
ATGGTCTAGAAAGCTTGGCCCAGCCCTTGTTCCAGCCGGCGGACTGAGCG
CCGGAATAGCCACCAGAGTAGCCACCAGACTGAGCGCCGGAGTAACCACC
GGAGTAGCCACCAGACTGAGCGCCGGAGTAACCGCCAGAGTAGCCTTCGT
TAATGACCTTCACGATGACAACCTTCTCAACGGGCCTGGGAGCAGCATAT
CCGCCAGAGTAGCCACCGCCGCCGGAGTATCCACCACCGCCGGAGTATCC
ACCACCGCCGGAGTAGCCGCCACCGTTGGAGTAGCCACCGGAGTAGCCGC
CGCCGCCTCCACCGCCGCCGAGCTTGCCGCCAAGACCACCGCTCAGACCG
CCCAGGCCGCCGCCCAATCCTCCGCCGAGACCGCCCAGCTTGCTCTGCAG
CAGCTGTCCGATGCCGCCAGCGCCTCCGCCAATAGAGCCGCCGCCTCCAC
CGCCGCCGCCAAGAAGACCGCCCAGGGAGGCCTGTCCCACGGACAGGATG
GCGGCAAGGATCACCAGGATGCAGGCAAAGGGTTTCATGTCGACTGATAA
CT

BO12115.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-PB 693 CG10598-RB 172..690 538..20 2595 100 Minus
CG10598-PA 522 CG10598-RA 1..519 538..20 2595 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-RC 1711 CG10598-RC 475..998 543..20 2605 99.8 Minus
CG10598-RA 729 CG10598-RA 50..573 543..20 2605 99.8 Minus
CG10598-RC 1711 CG10598-RC 873..940 109..42 265 92.6 Minus
CG10598-RC 1711 CG10598-RC 909..976 145..78 265 92.6 Minus
CG10598-RA 729 CG10598-RA 448..515 109..42 265 92.6 Minus
CG10598-RA 729 CG10598-RA 484..551 145..78 265 92.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17225870..17226393 20..543 2605 99.8 Plus
X 23542271 X 17225892..17225959 78..145 265 92.6 Plus
X 23542271 X 17225928..17225995 42..109 265 92.6 Plus
Blast to na_te.dros performed on 2015-02-12 18:04:14 has no hits.

BO12115.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:26:25 Download gff for BO12115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-PA 1..522 15..538 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:58:19 Download gff for BO12115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-PA 1..522 15..538 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:55:53 Download gff for BO12115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 50..576 15..543 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:53:21 Download gff for BO12115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 50..576 15..543 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:53:21 Download gff for BO12115.3prime
Subject Subject Range Query Range Percent Splice Strand
X 17225866..17226393 15..543 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:55:53 Download gff for BO12115.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17119899..17120426 15..543 99   Plus

BO12115.5prime Sequence

552 bp (551 high quality bases) assembled on 2006-04-20

> BO12115.5prime
GAAGTTATCAGTCGACATGAAACCCTTTGCCTGCATCCTGGTGATCCTTG
CCGCCATCCTGTCCGTGGGACAGGCCTCCCTGGGCGGTCTTCTTGGCGGC
GGCGGTGGAGGCGGCGGCTCTATTGGCGGAGGCGCTGGCGGCATCGGACA
GCTGCTGCAGAGCAAGCTGGGCGGTCTCGGCGGAGGATTGGGCGGCGGCC
TGGGCGGTCTGAGCGGTGGTCTTGGCGGCAAGCTCGGCGGCGGTGGAGGC
GGCGGCGGCTACTCCGGTGGCTACTCCAACGGTGGCGGCTACTCCGGCGG
TGGTGGATACTCCGGCGGTGGTGGATACTCCGGCGGCGGTGGCTACTCTG
GCGGATATGCTGCTCCCAGGCCCGTTGAGAAGGTTGTCATCGTGAAGGTC
ATTAACGAAGGCTACTCTGGCGGTTACTCCGGCGCTCAGTCTGGTGGCTA
CTCCGGTGGTTACTCCGGCGCTCAGTCTGGTGGCTACTCTGGTGGCTATT
CCGGCGCTCAGTCCGCCGGCTGGAACAAGGGCTGGGCCAAGCTTTCTAGA
CC

BO12115.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-PB 693 CG10598-RB 172..690 17..535 2595 100 Plus
CG10598-PA 522 CG10598-RA 1..519 17..535 2595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 10:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-RC 1711 CG10598-RC 475..998 12..535 2605 99.8 Plus
CG10598-RA 729 CG10598-RA 50..573 12..535 2605 99.8 Plus
CG10598-RC 1711 CG10598-RC 873..940 446..513 265 92.6 Plus
CG10598-RC 1711 CG10598-RC 909..976 410..477 265 92.6 Plus
CG10598-RA 729 CG10598-RA 448..515 446..513 265 92.6 Plus
CG10598-RA 729 CG10598-RA 484..551 410..477 265 92.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 10:29:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17225870..17226393 535..12 2605 99.8 Minus
X 23542271 X 17225892..17225959 477..410 265 92.6 Minus
X 23542271 X 17225928..17225995 513..446 265 92.6 Minus
Blast to na_te.dros performed on 2015-02-04 10:29:18 has no hits.

BO12115.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:26:26 Download gff for BO12115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-PA 1..522 17..540 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:58:21 Download gff for BO12115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-PA 1..522 17..540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 11:26:02 Download gff for BO12115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 50..576 12..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 12:37:17 Download gff for BO12115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 50..576 12..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 12:37:17 Download gff for BO12115.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17225866..17226393 12..540 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 11:26:02 Download gff for BO12115.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17119899..17120426 12..540 99   Minus

BO12115.complete Sequence

554 bp assembled on 2008-08-15

> BO12115.complete
GAAGTTATCAGTCGACATGAAACCCTTTGCCTGCATCCTGGTGATCCTTG
CCGCCATCCTGTCCGTGGGACAGGCCTCCCTGGGCGGTCTTCTTGGCGGC
GGCGGTGGAGGCGGCGGCTCTATTGGCGGAGGCGCTGGCGGCATCGGACA
GCTGCTGCAGAGCAAGCTGGGCGGTCTCGGCGGAGGATTGGGCGGCGGCC
TGGGCGGTCTGAGCGGTGGTCTTGGCGGCAAGCTCGGCGGCGGTGGAGGC
GGCGGCGGCTACTCCGGTGGCTACTCCAACGGTGGCGGCTACTCCGGCGG
TGGTGGATACTCCGGCGGTGGTGGATACTCCGGCGGCGGTGGCTACTCTG
GCGGATATGCTGCTCCCAGGCCCGTTGAGAAGGTTGTCATCGTGAAGGTC
ATTAACGAAGGCTACTCTGGCGGTTACTCCGGCGCTCAGTCTGGTGGCTA
CTCCGGTGGTTACTCCGGCGCTCAGTCTGGTGGCTACTCTGGTGGCTATT
CCGGCGCTCAGTCCGCCGGCTGGAACAAGGGCTGGGCCAAGCTTTCTAGA
CCAT

BO12115.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-RC 522 CG10598-PC 1..519 17..535 2595 100 Plus
CG10598-RA 522 CG10598-PA 1..519 17..535 2595 100 Plus
CG10598-RC 522 CG10598-PC 394..461 446..513 265 92.6 Plus
CG10598-RC 522 CG10598-PC 430..497 410..477 265 92.6 Plus
CG10598-RA 522 CG10598-PA 394..461 446..513 265 92.6 Plus
CG10598-RA 522 CG10598-PA 430..497 410..477 265 92.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-RC 1711 CG10598-RC 475..998 12..535 2605 99.8 Plus
CG10598-RA 729 CG10598-RA 50..573 12..535 2605 99.8 Plus
CG10598-RC 1711 CG10598-RC 873..940 446..513 265 92.6 Plus
CG10598-RC 1711 CG10598-RC 909..976 410..477 265 92.6 Plus
CG10598-RA 729 CG10598-RA 448..515 446..513 265 92.6 Plus
CG10598-RA 729 CG10598-RA 484..551 410..477 265 92.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17225870..17226393 535..12 2605 99.8 Minus
X 23542271 X 17225892..17225959 477..410 265 92.6 Minus
X 23542271 X 17225928..17225995 513..446 265 92.6 Minus
Blast to na_te.dros performed on 2014-11-27 16:10:59 has no hits.

BO12115.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:44:01 Download gff for BO12115.complete
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 49..575 12..540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:29 Download gff for BO12115.complete
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 55..573 17..538 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:04:52 Download gff for BO12115.complete
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 54..572 17..538 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:39 Download gff for BO12115.complete
Subject Subject Range Query Range Percent Splice Strand
CG10598-RA 55..573 17..538 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:39 Download gff for BO12115.complete
Subject Subject Range Query Range Percent Splice Strand
X 17225867..17226388 17..538 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:29 Download gff for BO12115.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17119900..17120421 17..538 99   Minus

BO12115.pep Sequence

Translation from 16 to 553

> BO12115.pep
MKPFACILVILAAILSVGQASLGGLLGGGGGGGGSIGGGAGGIGQLLQSK
LGGLGGGLGGGLGGLSGGLGGKLGGGGGGGGYSGGYSNGGGYSGGGGYSG
GGGYSGGGGYSGGYAAPRPVEKVVIVKVINEGYSGGYSGAQSGGYSGGYS
GAQSGGYSGGYSGAQSAGWNKGWAKLSRP

BO12115.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10598-PC 173 CG10598-PC 1..173 1..173 931 100 Plus
CG10598-PA 173 CG10598-PA 1..173 1..173 931 100 Plus
CG14191-PA 193 CG14191-PA 1..192 1..177 324 44.5 Plus
CG12523-PB 250 CG12523-PB 3..159 7..172 286 40.1 Plus
CG12523-PA 250 CG12523-PA 3..159 7..172 286 40.1 Plus
CG12523-PB 250 CG12523-PB 120..242 19..169 158 36.2 Plus