Clone Sequence Records
BO12127.3prime Sequence
864 bp (819 high quality bases) assembled on 2006-04-20
> BO12127.3prime
ATGGTCTAGAAAGCTTGCGTGGCGGCGCAACACAACGCGCTTGTGGGTCT
TGTAGACGTATCCATCATCAGCCAGGACATGGGCGGGAGCCGCCTCGACG
GTGTTTTCCTGGGGGGCAAGGTACTCGGCAGAGGGAGCAGACTGCACGGG
AGGCAAGTACTCGTTGGAGAGCTCGTTCACATCACGACGGTGACGGCGGG
TTACCACGCGCTTGTGGGTCTTGTAGCGGTATCCATCAACGGCCAAGTCG
GTCTCAGGAGCAGTCTCAGCGGGAGCCAGGTACTCGTTGGAAGGAGCTGC
GAAGGGGGGCAGGTACTCGTTGGAGAGCTCGTTGACGTCACGGCGGTGGC
GGCGGTAAACAACGCGACGATGGGTCTTGTAACGGTAACCGTCATCGGCC
AGCTCATGGGCGGGCTCAGCCTCAACCACGACAGGAGCGGGGGCGGCCAG
CTGGACAGGGGCGGCGATCTGAACTGGAGCGGGAGCTGGGGCAGCAACCT
GGACGGGGGCGGACACTGGGGGCAGATACTCGTTGGAAGGAGCAGCAGCC
TGGACTGGGGGCAGGTACTCGTTGGAGGGCAAGTGGCTCACATCACGACG
GTGACGGCGGGTTACCACGCGCTTGTGGGTCTTGTAACGGTATCCATCAT
CGGCCAAGATGGTCTCAGGAGCACCCTCAGCAGGAGCCAGGTACTCGTTG
GAAGGAGCTGCGAAGGGGGGCAGGTACTCGTTGAAGAGCTCGTTGACGTC
ACGGCGGTGGCGGCGGACCACCACGCGCTTGTGGGTCTTGTACCGGTAGC
CATCATCGGCCAGCTCATGGGCGGGGGCAGACTCGGCCTGCACGGGAGGC
AGGGACTCGTTTGC
BO12127.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:37:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-PA | 966 | CG7465-RA | 121..963 | 861..19 | 4190 | 99.8 | Minus |
| CG11350-PB | 1371 | CG11350-RB | 927..977 | 610..560 | 180 | 94.1 | Minus |
| CG11350-PB | 1371 | CG11350-RB | 595..629 | 237..203 | 175 | 100 | Minus |
| CG11350-PB | 1371 | CG11350-RB | 595..629 | 648..614 | 150 | 97.1 | Minus |
| CG11350-PB | 1371 | CG11350-RB | 889..923 | 237..203 | 150 | 97.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 05:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-RA | 1126 | CG7465-RA | 169..1011 | 861..19 | 4200 | 99.9 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 205..486 | 414..136 | 950 | 89.4 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 616..894 | 825..544 | 950 | 89.4 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 924..1017 | 648..555 | 335 | 90.4 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 218..315 | 245..148 | 295 | 86.7 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 785..882 | 812..715 | 295 | 86.7 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 218..342 | 656..523 | 260 | 80.6 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 374..507 | 812..688 | 260 | 80.6 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 924..1015 | 237..149 | 260 | 87 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 629..726 | 245..148 | 220 | 81.6 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 785..882 | 401..304 | 220 | 81.6 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 615..720 | 663..549 | 210 | 80 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 195..273 | 97..19 | 200 | 83.5 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 374..507 | 401..277 | 200 | 77.6 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 629..753 | 656..523 | 200 | 77.6 | Minus |
| CG7465-RA | 1126 | CG7465-RA | 933..1011 | 835..757 | 200 | 83.5 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 630..684 | 237..183 | 200 | 90.9 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 924..1012 | 804..719 | 200 | 83.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 05:02:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4480530..4481372 | 861..19 | 4200 | 99.9 | Minus |
| 3L | 28110227 | 3L | 4480566..4480847 | 414..136 | 925 | 89.4 | Minus |
| 3L | 28110227 | 3L | 4480977..4481255 | 825..544 | 925 | 89.4 | Minus |
| 3L | 28110227 | 3L | 4483797..4483890 | 648..555 | 335 | 90.4 | Minus |
| 3L | 28110227 | 3L | 4480579..4480676 | 245..148 | 295 | 86.7 | Minus |
| 3L | 28110227 | 3L | 4481146..4481243 | 812..715 | 295 | 86.7 | Minus |
| 3L | 28110227 | 3L | 4483797..4483857 | 237..177 | 245 | 93.4 | Minus |
| 3L | 28110227 | 3L | 4480579..4480675 | 656..557 | 225 | 84 | Minus |
| 3L | 28110227 | 3L | 4480735..4480834 | 812..716 | 225 | 84 | Minus |
| 3L | 28110227 | 3L | 4480990..4481087 | 245..148 | 220 | 81.6 | Minus |
| 3L | 28110227 | 3L | 4481146..4481243 | 401..304 | 220 | 81.6 | Minus |
| 3L | 28110227 | 3L | 4480556..4480634 | 97..19 | 200 | 83.5 | Minus |
| 3L | 28110227 | 3L | 4481294..4481372 | 835..757 | 200 | 83.5 | Minus |
| 3L | 28110227 | 3L | 4483488..4483557 | 663..594 | 200 | 85.7 | Minus |
| 3L | 28110227 | 3L | 4483503..4483557 | 237..183 | 200 | 90.9 | Minus |
| 3L | 28110227 | 3L | 4483797..4483852 | 804..749 | 190 | 89.3 | Minus |
Blast to na_te.dros performed on 2015-02-01 05:02:27 has no hits.
BO12127.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:26:47 Download gff for
BO12127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-PA | 119..966 | 15..864 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:58:54 Download gff for
BO12127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-PA | 119..966 | 15..864 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:11:19 Download gff for
BO12127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 167..1014 | 15..864 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 05:51:51 Download gff for
BO12127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 167..1014 | 15..864 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 05:51:51 Download gff for
BO12127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4480528..4481375 | 15..864 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:11:19 Download gff for
BO12127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4480528..4481375 | 15..864 | 99 | | Minus |
BO12127.5prime Sequence
872 bp (752 high quality bases) assembled on 2006-04-20
> BO12127.5prime
GAAGTTATCAGTCGACATGAAACTCTTCCTGGTCGCTTTTGCCGTGATCG
CAGCCGTGGCTGCCGATGTCAGCCACCTGCCCTCCAACGAGTACCTGCCT
CCCGTCCAGGAGCAGCAGATCATCGCCGGACCCAGCAACGAGTACCTGCC
TCCCGTGCAGGCCGAGTCTGCCCCCGCCCATGAGCTGGCCGATGATGGCT
ACCGGTACAAGACCCACAAGCGCGTGGTGGTCCGCCGCCACCGCCGTGAC
GTCAACGAGCTCTTCAACGAGTACCTGCCCCCCTTCGCAGCTCCTTCCAA
CGAGTACCTGGCTCCTGCTGAGGGTGCTCCTGAGACCATCTTGGCCGATG
ATGGATACCGTTACAAGACCCACAAGCGCGTGGTAACCCGCCGTCACCGT
CGTGATGTGAGCCACTTGCCCTCCAACGAGTACCTGCCCCCAGTCCAGGC
TGCTGCTCCTTCCAACGAGTATCTGCCCCCAGTGTCCGCCCCCGTCCAGG
TTGCTGCCCCAGCTCCCGCTCCAGTTCAGATCGCCGCCCCTGTCCAGCTG
GCCGCCCCCGCTCCTGTCGTGGTTGAGGCTGAGCCCGCCCATGAGCTGGC
CGATGACGGTTACCGTTACAAGACCCATCGTCGCGTTGTTTACCGCCGCC
ACCGCCGTGACGTCAACGAGCTCTCCAACGAGTACCTGCCCCCCTTCGCA
GCTCCTTCCAACGAGTACCTGGCTCCCGCTGAGACTGCTCCTGAGACCGA
CTTGGCCGTTGATGGATACCGCTACAAGACCCACAAGCGCGTGGTAACCC
GCCGTCACCGTCGTGATGTGAACGAGCTCTCCAACGAGTACTTGCTTCCC
GTGCAGTCCTGCTCCCTCTGCC
BO12127.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:37:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-PA | 966 | CG7465-RA | 1..842 | 17..858 | 4185 | 99.8 | Plus |
| CG11350-PB | 1371 | CG11350-RB | 927..977 | 388..438 | 180 | 94.1 | Plus |
| CG11350-PB | 1371 | CG11350-RB | 595..629 | 761..795 | 175 | 100 | Plus |
| CG11350-PB | 1371 | CG11350-RB | 595..629 | 350..384 | 150 | 97.1 | Plus |
| CG11350-PB | 1371 | CG11350-RB | 889..923 | 761..795 | 150 | 97.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-RA | 1126 | CG7465-RA | 49..903 | 17..872 | 4240 | 99.8 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 616..894 | 173..454 | 950 | 89.4 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 205..469 | 584..845 | 925 | 90.2 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 924..1017 | 350..443 | 335 | 90.4 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 785..882 | 186..283 | 295 | 86.7 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 218..310 | 753..845 | 285 | 87.1 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 218..342 | 342..475 | 260 | 80.6 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 374..507 | 186..310 | 260 | 80.6 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 924..984 | 761..821 | 245 | 93.4 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 785..882 | 597..694 | 220 | 81.6 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 629..721 | 753..845 | 210 | 81.7 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 615..720 | 335..449 | 210 | 80 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 374..507 | 597..721 | 200 | 77.6 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 629..753 | 342..475 | 200 | 77.6 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 933..1011 | 163..241 | 200 | 83.5 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 630..684 | 761..815 | 200 | 90.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 924..1012 | 194..279 | 200 | 83.1 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 63..134 | 47..117 | 185 | 84.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:41:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4480412..4481264 | 19..872 | 4205 | 99.8 | Plus |
| 3L | 28110227 | 3L | 4480977..4481255 | 173..454 | 925 | 89.4 | Plus |
| 3L | 28110227 | 3L | 4480566..4480803 | 584..821 | 905 | 92 | Plus |
| 3L | 28110227 | 3L | 4483797..4483890 | 350..443 | 335 | 90.4 | Plus |
| 3L | 28110227 | 3L | 4481146..4481243 | 186..283 | 295 | 86.7 | Plus |
| 3L | 28110227 | 3L | 4480579..4480671 | 753..845 | 285 | 87.1 | Plus |
| 3L | 28110227 | 3L | 4483797..4483857 | 761..821 | 245 | 93.4 | Plus |
| 3L | 28110227 | 3L | 4480579..4480675 | 342..441 | 225 | 84 | Plus |
| 3L | 28110227 | 3L | 4480735..4480834 | 186..282 | 225 | 84 | Plus |
| 3L | 28110227 | 3L | 4481146..4481243 | 597..694 | 220 | 81.6 | Plus |
| 3L | 28110227 | 3L | 4480990..4481082 | 753..845 | 210 | 81.7 | Plus |
| 3L | 28110227 | 3L | 4481294..4481372 | 163..241 | 200 | 83.5 | Plus |
| 3L | 28110227 | 3L | 4483488..4483557 | 335..404 | 200 | 85.7 | Plus |
| 3L | 28110227 | 3L | 4483503..4483557 | 761..815 | 200 | 90.9 | Plus |
| 3L | 28110227 | 3L | 4483797..4483852 | 194..249 | 190 | 89.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:41:33 has no hits.
BO12127.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:26:48 Download gff for
BO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-PA | 1..855 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:58:55 Download gff for
BO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-PA | 1..855 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:47:08 Download gff for
BO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 39..903 | 7..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:48:44 Download gff for
BO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 39..903 | 7..872 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:48:44 Download gff for
BO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4480403..4481264 | 8..872 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:47:08 Download gff for
BO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4480403..4481264 | 8..872 | 99 | | Plus |
BO12127.complete Sequence
997 bp assembled on 2006-10-11
GenBank Submission: FJ632320
> BO12127.complete
GAAGTTATCAGTCGACATGAAACTCTTCCTGGTCGCTTTTGCCGTGATCG
CAGCCGTGGCTGCCGATGTCAGCCACCTGCCCTCCAACGAGTACCTGCCT
CCCGTCCAGGAGCAGCAGATCATCGCCGGACCCAGCAACGAGTACCTGCC
TCCCGTGCAGGCCGAGTCTGCCCCCGCCCATGAGCTGGCCGATGATGGCT
ACCGGTACAAGACCCACAAGCGCGTGGTGGTCCGCCGCCACCGCCGTGAC
GTCAACGAGCTCTTCAACGAGTACCTGCCCCCCTTCGCAGCTCCTTCCAA
CGAGTACCTGGCTCCTGCTGAGGGTGCTCCTGAGACCATCTTGGCCGATG
ATGGATACCGTTACAAGACCCACAAGCGCGTGGTAACCCGCCGTCACCGT
CGTGATGTGAGCCACTTGCCCTCCAACGAGTACCTGCCCCCAGTCCAGGC
TGCTGCTCCTTCCAACGAGTATCTGCCCCCAGTGTCCGCCCCCGTCCAGG
TTGCTGCCCCAGCTCCCGCTCCAGTTCAGATCGCCGCCCCTGTCCAGCTG
GCCGCCCCCGCTCCTGTCGTGGTTGAGGCTGAGCCCGCCCATGAGCTGGC
CGATGACGGTTACCGTTACAAGACCCATCGTCGCGTTGTTTACCGCCGCC
ACCGCCGTGACGTCAACGAGCTCTCCAACGAGTACCTGCCCCCCTTCGCA
GCTCCTTCCAACGAGTACCTGGCTCCCGCTGAGACTGCTCCTGAGACCGA
CTTGGCCGTTGATGGATACCGCTACAAGACCCACAAGCGCGTGGTAACCC
GCCGTCACCGTCGTGATGTGAACGAGCTCTCCAACGAGTACTTGCCTCCC
GTGCAGTCTGCTCCCTCTGCCGAGTACCTTGCCCCCCAGGAAAACACCGT
CGAGGCGGCTCCCGCCCATGTCCTGGCTGATGATGGATACGTCTACAAGA
CCCACAAGCGCGTTGTGTTGCGCCGCCACGCAAGCTTTCTAGACCAT
BO12127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:49:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-RA | 966 | CG7465-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
| CG7465-RA | 966 | CG7465-PA | 157..438 | 584..862 | 925 | 89.4 | Plus |
| CG7465-RA | 966 | CG7465-PA | 568..846 | 173..454 | 925 | 89.4 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 889..982 | 350..443 | 335 | 90.4 | Plus |
| CG7465-RA | 966 | CG7465-PA | 170..267 | 753..850 | 295 | 86.7 | Plus |
| CG7465-RA | 966 | CG7465-PA | 737..834 | 186..283 | 295 | 86.7 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 889..949 | 761..821 | 245 | 93.4 | Plus |
| CG7465-RA | 966 | CG7465-PA | 170..266 | 342..441 | 225 | 84 | Plus |
| CG7465-RA | 966 | CG7465-PA | 326..425 | 186..282 | 225 | 84 | Plus |
| CG7465-RA | 966 | CG7465-PA | 581..678 | 753..850 | 220 | 81.6 | Plus |
| CG7465-RA | 966 | CG7465-PA | 737..834 | 597..694 | 220 | 81.6 | Plus |
| CG7465-RA | 966 | CG7465-PA | 147..225 | 901..979 | 200 | 83.5 | Plus |
| CG7465-RA | 966 | CG7465-PA | 885..963 | 163..241 | 200 | 83.5 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 580..649 | 335..404 | 200 | 85.7 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 595..649 | 761..815 | 200 | 90.9 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 889..944 | 194..249 | 190 | 89.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:49:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-RA | 1126 | CG7465-RA | 49..1011 | 17..979 | 4815 | 100 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 205..486 | 584..862 | 925 | 89.4 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 616..894 | 173..454 | 925 | 89.4 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 924..1017 | 350..443 | 335 | 90.4 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 218..315 | 753..850 | 295 | 86.7 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 785..882 | 186..283 | 295 | 86.7 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 924..984 | 761..821 | 245 | 93.4 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 218..314 | 342..441 | 225 | 84 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 374..473 | 186..282 | 225 | 84 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 629..726 | 753..850 | 220 | 81.6 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 785..882 | 597..694 | 220 | 81.6 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 195..273 | 901..979 | 200 | 83.5 | Plus |
| CG7465-RA | 1126 | CG7465-RA | 933..1011 | 163..241 | 200 | 83.5 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 615..684 | 335..404 | 200 | 85.7 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 630..684 | 761..815 | 200 | 90.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 924..979 | 194..249 | 190 | 89.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:49:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4480412..4481372 | 19..979 | 4805 | 100 | Plus |
| 3L | 28110227 | 3L | 4480566..4480847 | 584..862 | 925 | 89.4 | Plus |
| 3L | 28110227 | 3L | 4480977..4481255 | 173..454 | 925 | 89.4 | Plus |
| 3L | 28110227 | 3L | 4483797..4483890 | 350..443 | 335 | 90.4 | Plus |
| 3L | 28110227 | 3L | 4480579..4480676 | 753..850 | 295 | 86.7 | Plus |
| 3L | 28110227 | 3L | 4481146..4481243 | 186..283 | 295 | 86.7 | Plus |
| 3L | 28110227 | 3L | 4483797..4483857 | 761..821 | 245 | 93.4 | Plus |
| 3L | 28110227 | 3L | 4480579..4480675 | 342..441 | 225 | 84 | Plus |
| 3L | 28110227 | 3L | 4480735..4480834 | 186..282 | 225 | 84 | Plus |
| 3L | 28110227 | 3L | 4480990..4481087 | 753..850 | 220 | 81.6 | Plus |
| 3L | 28110227 | 3L | 4481146..4481243 | 597..694 | 220 | 81.6 | Plus |
| 3L | 28110227 | 3L | 4480556..4480634 | 901..979 | 200 | 83.5 | Plus |
| 3L | 28110227 | 3L | 4481294..4481372 | 163..241 | 200 | 83.5 | Plus |
| 3L | 28110227 | 3L | 4483488..4483557 | 335..404 | 200 | 85.7 | Plus |
| 3L | 28110227 | 3L | 4483503..4483557 | 761..815 | 200 | 90.9 | Plus |
| 3L | 28110227 | 3L | 4483797..4483852 | 194..249 | 190 | 89.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:49:39 has no hits.
BO12127.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:40:29 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 1..966 | 17..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:00:32 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 40..1015 | 7..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:21:37 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 49..1011 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:40:30 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 40..1015 | 7..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:31:51 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7465-RA | 49..1011 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:31:51 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4480411..4481372 | 17..981 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:21:37 Download gff for
BO12127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4480411..4481372 | 17..981 | 99 | | Plus |
BO12127.pep Sequence
Translation from 16 to 997
> BO12127.pep
MKLFLVAFAVIAAVAADVSHLPSNEYLPPVQEQQIIAGPSNEYLPPVQAE
SAPAHELADDGYRYKTHKRVVVRRHRRDVNELFNEYLPPFAAPSNEYLAP
AEGAPETILADDGYRYKTHKRVVTRRHRRDVSHLPSNEYLPPVQAAAPSN
EYLPPVSAPVQVAAPAPAPVQIAAPVQLAAPAPVVVEAEPAHELADDGYR
YKTHRRVVYRRHRRDVNELSNEYLPPFAAPSNEYLAPAETAPETDLAVDG
YRYKTHKRVVTRRHRRDVNELSNEYLPPVQSAPSAEYLAPQENTVEAAPA
HVLADDGYVYKTHKRVVLRRHASFLDH
BO12127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7465-PA | 321 | CG7465-PA | 1..321 | 1..321 | 1680 | 100 | Plus |
| CG13705-PA | 432 | CG13705-PA | 67..432 | 17..321 | 548 | 41.7 | Plus |
| CG32237-PA | 911 | CG32237-PA | 578..855 | 17..320 | 457 | 42.9 | Plus |
| CG32237-PA | 911 | CG32237-PA | 410..687 | 17..320 | 452 | 41.1 | Plus |
| CG11350-PC | 456 | CG11350-PC | 101..454 | 12..321 | 449 | 39.7 | Plus |
| CG32237-PA | 911 | CG32237-PA | 1..295 | 1..320 | 448 | 39 | Plus |
| CG32237-PA | 911 | CG32237-PA | 186..519 | 17..320 | 446 | 39.4 | Plus |
| CG32237-PA | 911 | CG32237-PA | 130..407 | 17..320 | 442 | 40.9 | Plus |
| CG11350-PC | 456 | CG11350-PC | 1..353 | 1..304 | 405 | 35.8 | Plus |
| CG11350-PC | 456 | CG11350-PC | 140..455 | 7..213 | 379 | 36.5 | Plus |
| CG7465-PA | 321 | CG7465-PA | 17..133 | 215..327 | 358 | 66.4 | Plus |
| CG32237-PA | 911 | CG32237-PA | 690..909 | 17..266 | 341 | 40.9 | Plus |
| CG11131-PB | 229 | CG11131-PB | 29..229 | 93..321 | 338 | 41.6 | Plus |
| CG13705-PA | 432 | CG13705-PA | 16..156 | 145..320 | 283 | 46.9 | Plus |
| CG32237-PA | 911 | CG32237-PA | 24..133 | 211..326 | 193 | 43.7 | Plus |
