Clone BO12151 Report

Search the DGRC for BO12151

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:121
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptsmp-30-RA
Protein status:BO12151.pep: validated full length
Sequenced Size:943

Clone Sequence Records

BO12151.3prime Sequence

767 bp (766 high quality bases) assembled on 2006-04-20

> BO12151.3prime
ATGGTCTAGAAAGCTTGCGATCTTCAAATTAACGCCGGCGTAACCCTTGG
CATTGAGCCCAGTGACCTGGAAGGTGGTACCAGCTGGTTTTGGCTGGTCG
AACTTGTTGGCGGTTGTCACATACAAAATATCCAAATTGGGACCTCCAAA
AGCCACCGAGGTGATTTGGGTGGTTGGAATTTTGATCTCCAGCAGAATTT
TACCGGTGCTTGGATTGACCTTGAAGACGGTGCCACCATTGAAGGTGGCC
ACGTAGATATTGCCATCGGTGTCTACGGTCATGCCATCAGGGAACAATGG
TCCTTCGGGCCGAATCTTCCTCAGATCGAAGATGACCTTTGGGTTGCTTA
CGGCGCCGGTGCTCTGATTGTAGTCATAGGCCAATACCTCGTGGTTGTTG
GTGTCGATGAAGTAGAACTTCTTGGCCTTGACATCCCAGGCCAGGCCATT
GGATATGCCCACCTTGCTACGGATAGCGTTGGGCTGTCCACCGGCCTGCC
AGCTGTAGAGCTCACCCTTCCATTGGGTGAATATGTCGCCACTGTCGGCC
ATGGTGCCACCGTAAAAACGGCCATTGGGATCGGTTTTGGCATCATTAAG
GCGGTTTTCCTTCAGGTCCGGCTGCACCTCGAACAGGGTGCGAGTGACCT
TGGCCACTGCGGAGACTCCATCCCACTGGACGATGACCGTACGAAGACCG
CATCCTACGGCAAACTCCTGCGGTTTGTTCTCAACCGGCAGAATGAACGA
TGCAAATATCTCGCCCT

BO12151.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7390-PA 912 smp-30-RA 161..909 767..19 3745 100 Minus
CG7390-PB 912 smp-30-RB 161..909 767..19 3745 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:18:35
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 1297 CG7390-RD 482..1230 767..19 3745 100 Minus
smp-30-RC 1102 CG7390-RC 287..1035 767..19 3745 100 Minus
smp-30-RB 1219 CG7390-RB 213..961 767..19 3745 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:18:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14746965 209..767 2795 100 Plus
3R 32079331 3R 14746159..14746350 19..210 960 100 Plus
Blast to na_te.dros performed on 2015-02-12 01:18:33 has no hits.

BO12151.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:27:35 Download gff for BO12151.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7390-PB 161..912 18..767 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:00:01 Download gff for BO12151.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7390-PB 161..912 18..767 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:25:17 Download gff for BO12151.3prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 213..967 11..767 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:28:28 Download gff for BO12151.3prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 213..967 11..767 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:28:28 Download gff for BO12151.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 14746153..14746348 11..208 97 <- Plus
3R 14746407..14746965 209..767 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:25:17 Download gff for BO12151.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10571875..10572070 11..208 97 <- Plus
arm_3R 10572129..10572687 209..767 100   Plus

BO12151.5prime Sequence

871 bp (764 high quality bases) assembled on 2006-04-20

> BO12151.5prime
GAAGTTATCAGTCGACATGTCATACAAGGTTGAAGCTGTTCCCGATTCCT
ACGCCGCCCTGGGCGAGGGACCCCACTGGGATGTTGATCGCCAGAGTCTG
TACTACGTGGACCTCGAATCCGCCGGCATTAATCGTTATGATTTCAAGCA
GAACAAAGTGTACAGGGCTAAAATCGAGGGCGAGATATTTGCATCGTTCA
TTCTGCCGGTTGAGAACAAACCGCAGGAGTTTGCCGTAGGATGCGGTCTT
CGTACGGTCATCGTCCAGTGGGATGGAGTCTCCGCAGTGGCCAAGGTCAC
TCGCACCCTGTTCGAGGTGCAGCCGGACCTGAAGGAAAACCGCCTTAATG
ATGCCAAAACCGATCCCAATGGCCGTTTTTACGGTGGCACCATGGCCGAC
AGTGGCGACATATTCACCCAATGGAAGGGTGAGCTCTACAGCTGGCAGGC
CGGTGGACAGCCCAACGCTATCCGTAGCAAGGTGGGCATATCCAATGGCC
TGGCCTGGGATGTCAAGGCCAAGAAGTTCTACTTCATCGACACCAACAAC
CACGAGGTATTGGCCTATGACTACAATCAGAGCACCGGCGCCGTAAGCAA
CCCAAAGGTCATCTTCGATCTGAGGAAGATTCGGCCCGAAGGACCATTGT
TCCCTGATGGCATGACCGTAGACACCGATGGCAATATCTACGTGGCCACC
TTCAATGGTGGCACCGTCTTCAAGGTCAATCCAAGCACCGGTAAAATTCT
GCTGGAGATCAAAATTCCAACCACCCAAATCACCTCGGTGGCTTTTGGAG
GTCCCAATTTGGATATTTTGTATGTGACAACCGCCAAACAGTTCGACCAG
CCAAAACCAGCTGGTACCACC

BO12151.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7390-PA 912 smp-30-RA 1..855 17..871 4225 99.7 Plus
CG7390-PB 912 smp-30-RB 1..855 17..871 4225 99.7 Plus
CG1803-PA 912 regucalcin-RA 25..68 41..84 145 93.1 Plus
CG1803-PC 912 regucalcin-RC 25..68 41..84 145 93.1 Plus
CG1803-PB 912 regucalcin-RB 25..68 41..84 145 93.1 Plus
CG1803-PD 960 regucalcin-RD 73..116 41..84 145 93.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 1297 CG7390-RD 322..1176 17..871 4245 99.8 Plus
smp-30-RC 1102 CG7390-RC 127..981 17..871 4245 99.8 Plus
smp-30-RB 1219 CG7390-RB 53..907 17..871 4245 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14747125 735..17 3595 100 Minus
3R 32079331 3R 14746213..14746350 871..734 660 98.6 Minus
X 23542271 X 12016003..12016718 17..732 475 71.1 Plus
Blast to na_te.dros performed on 2015-02-11 10:53:55 has no hits.

BO12151.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:27:36 Download gff for BO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7390-PB 1..855 17..871 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:00:02 Download gff for BO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7390-PB 1..855 17..871 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:05:10 Download gff for BO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..907 17..871 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:47:05 Download gff for BO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..907 17..871 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:47:05 Download gff for BO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 14746213..14746348 736..871 98 <- Minus
3R 14746407..14747129 12..735 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:05:10 Download gff for BO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10571935..10572070 736..871 98 <- Minus
arm_3R 10572129..10572851 12..735 99   Minus

BO12151.complete Sequence

943 bp assembled on 2006-10-11

GenBank Submission: FJ632333

> BO12151.complete
GAAGTTATCAGTCGACATGTCATACAAGGTTGAAGCTGTTCCCGATTCCT
ACGCCGCCCTGGGCGAGGGACCCCACTGGGATGTTGATCGCCAGAGTCTG
TACTACGTGGACCTCGAATCCGCCGGCATTAATCGTTATGATTTCAAGCA
GAACAAAGTGTACAGGGCTAAAATCGAGGGCGAGATATTTGCATCGTTCA
TTCTGCCGGTTGAGAACAAACCGCAGGAGTTTGCCGTAGGATGCGGTCTT
CGTACGGTCATCGTCCAGTGGGATGGAGTCTCCGCAGTGGCCAAGGTCAC
TCGCACCCTGTTCGAGGTGCAGCCGGACCTGAAGGAAAACCGCCTTAATG
ATGCCAAAACCGATCCCAATGGCCGTTTTTACGGTGGCACCATGGCCGAC
AGTGGCGACATATTCACCCAATGGAAGGGTGAGCTCTACAGCTGGCAGGC
CGGTGGACAGCCCAACGCTATCCGTAGCAAGGTGGGCATATCCAATGGCC
TGGCCTGGGATGTCAAGGCCAAGAAGTTCTACTTCATCGACACCAACAAC
CACGAGGTATTGGCCTATGACTACAATCAGAGCACCGGCGCCGTAAGCAA
CCCAAAGGTCATCTTCGATCTGAGGAAGATTCGGCCCGAAGGACCATTGT
TCCCTGATGGCATGACCGTAGACACCGATGGCAATATCTACGTGGCCACC
TTCAATGGTGGCACCGTCTTCAAGGTCAATCCAAGCACCGGTAAAATTCT
GCTGGAGATCAAAATTCCAACCACCCAAATCACCTCGGTGGCTTTTGGAG
GTCCCAATTTGGATATTTTGTATGTGACAACCGCCAACAAGTTCGACCAG
CCAAAACCAGCTGGTACCACCTTCCAGGTCACTGGGCTCAATGCCAAGGG
TTACGCCGGCGTTAATTTGAAGATCGCAAGCTTTCTAGACCAT

BO12151.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 912 CG7390-PD 1..909 17..925 4545 100 Plus
smp-30-RC 921 CG7390-PC 10..918 17..925 4545 100 Plus
smp-30-RB 912 CG7390-PB 1..909 17..925 4545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 1297 CG7390-RD 322..1230 17..925 4545 100 Plus
smp-30-RC 1102 CG7390-RC 127..1035 17..925 4545 100 Plus
smp-30-RB 1219 CG7390-RB 53..961 17..925 4545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14747125 735..17 3595 100 Minus
3R 32079331 3R 14746159..14746350 925..734 960 100 Minus
X 23542271 X 12016003..12016718 17..732 475 71.1 Plus
Blast to na_te.dros performed on 2014-11-27 14:16:17 has no hits.

BO12151.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:40:26 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 1..912 17..926 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:03:11 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 49..963 17..933 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:38:26 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..961 17..927 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:40:26 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 49..963 17..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:07:19 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..961 17..927 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:07:19 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14746157..14746348 736..927 98 <- Minus
3R 14746407..14747125 17..735 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:38:26 Download gff for BO12151.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10571879..10572070 736..927 98 <- Minus
arm_3R 10572129..10572847 17..735 100   Minus

BO12151.pep Sequence

Translation from 16 to 943

> BO12151.pep
MSYKVEAVPDSYAALGEGPHWDVDRQSLYYVDLESAGINRYDFKQNKVYR
AKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWDGVSAVAKVTRTLFE
VQPDLKENRLNDAKTDPNGRFYGGTMADSGDIFTQWKGELYSWQAGGQPN
AIRSKVGISNGLAWDVKAKKFYFIDTNNHEVLAYDYNQSTGAVSNPKVIF
DLRKIRPEGPLFPDGMTVDTDGNIYVATFNGGTVFKVNPSTGKILLEIKI
PTTQITSVAFGGPNLDILYVTTANKFDQPKPAGTTFQVTGLNAKGYAGVN
LKIASFLDH

BO12151.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-PD 303 CG7390-PD 1..303 1..303 1599 100 Plus
smp-30-PB 303 CG7390-PB 1..303 1..303 1599 100 Plus
smp-30-PA 303 CG7390-PA 1..303 1..303 1599 100 Plus
smp-30-PC 306 CG7390-PC 4..306 1..303 1599 100 Plus
regucalcin-PB 303 CG1803-PB 1..303 1..303 1173 71.9 Plus