Clone BO12195 Report

Search the DGRC for BO12195

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:121
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG15743-RA
Protein status:BO12195.pep: validated full length
Sequenced Size:1099

Clone Sequence Records

BO12195.3prime Sequence

843 bp (841 high quality bases) assembled on 2006-04-20

> BO12195.3prime
ATGGTCTAGAAAGCTTGCCGCCAGCTTGCCATTGTGCGCCTCGCGATATT
TGGACAGCTTGTCCATGTACTCGTCATGCTGCTCCAAGGTGGCCAGCAGG
CCCTCCGTATTGACTGGCGATTCCTCTGGTCCGTAGTTAATCAACTGATC
GTTCAGCGTGGTCATTGTGCCGCCCAATGCGTGCAGAATAGCATCGCCGG
CGCAAATGTCCCACTTCTTGATCTTCGACGTGTGCAAATAGGCGGTGGCA
TTGTTGGCCACCACCTGGAGCACCTTGTAGCCAGCTCCCGCCGCCGTCAG
CAGGCTGACATTCTCGCCAAAGATGCCCCTCGCCAGATCCTTGGCACCTG
CCGTGTGGGATCGCGAGACTGTAATGATGGGCGCCTGATTGTTTGGCGAA
TGCTGCGGATGCAGATTGGATAGGTACTCAGACATCGAGTTGCCCACCCA
CGCCCACGCGGTTTGTCCATTGAACGGGCTGTGGATCACGCCAATGATGG
GCCTTCCGGCCACTGCCACGCACACCATGGTGGTCACGTACTCGTATAGC
TCCTCGGTGAACTCCTTGGTGGCATCCAACGGATCTACCCAAACAGTGAC
ATCCTGGGCATTTACGGTCACATCCGGTATCTGTGCGGTCTCGTGGAGGA
CCGTTGGATCTAGATCATAGCCGTGTGCCTGCTTGCAGTGCTCCTTGTCC
TCCTCGGAGAAGATTTGTACGCGGGGAAAGATTCGCTGCAGGCCCTGCTT
CATCACACAATGTGACCGGCCGTCGGCATCCGTGAAGGGATCATTGACGC
CCTCGTCCGTCTTGCCCTTGCTGCGCTCCTTCAGCTGGCGACT

BO12195.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-PA 1068 CG15743-RA 241..1065 843..19 4125 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:23:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-RB 1450 CG15743-RB 376..1200 843..19 4125 100 Minus
CG15743-RC 1959 CG15743-RC 885..1709 843..19 4125 100 Minus
CG15743-RA 1650 CG15743-RA 576..1400 843..19 4125 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:23:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13286951..13287491 559..19 2690 99.8 Minus
X 23542271 X 13286591..13286879 843..555 1445 100 Minus
Blast to na_te.dros performed on 2015-02-12 18:23:38 has no hits.

BO12195.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:29:02 Download gff for BO12195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-PA 241..1068 18..843 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:01:59 Download gff for BO12195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-PA 241..1068 18..843 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:56:12 Download gff for BO12195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 576..1400 19..843 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:15:55 Download gff for BO12195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 576..1400 19..843 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:15:55 Download gff for BO12195.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13286591..13286879 555..843 100 -> Minus
X 13286956..13287491 19..554 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:56:12 Download gff for BO12195.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13180624..13180912 555..843 100 -> Minus
arm_X 13180989..13181524 19..554 100   Minus

BO12195.5prime Sequence

868 bp (828 high quality bases) assembled on 2006-04-20

> BO12195.5prime
GAAGTTATCAGTCGACATGAGCGAAGACAAGATGAACGGACGCTCCATTC
GCATCAACCGGCTGCCGGCCACCATTGTGGCCATCCTGCTGACCTTTGTC
CTGGTCTACTTCCTCAATTTCCATCAGGAGGAGCGGCCAGCGATCTACGG
CATGCTGCGCAGTGAGAATCCCAGCCGCGTCAATCTACGCAAGATGCTAA
TAGCCGCCATACAGGCCGCCCAGCGTGGCGGTCTCGAGGTACTGGACGTG
GCCCGGAGTCGCCAGCTGAAGGAGCGCAGCAAGGGCAAGACGGACGAGGG
CGTCAATGATCCCTTCACGGATGCCGACGGCCGGTCACATTGTGTGATGA
AGCAGGGCCTGCAGCGAATCTTTCCCCGCGTACAAATCTTCTCCGAGGAG
GACAAGGAGCACTGCAAGCAGGCACACGGCTATGATCTAGATCCAACGGT
CCTCCACGAGACCGCACAGATACCGGATGTGACCGTAAATGCCCAGGATG
TCACTGTTTGGGTAGATCCGTTGGATGCCACCAAGGAGTTCACCGAGGAG
CTATACGAGTACGTGACCACCATGGTGTGCGTGGCAGTGGCCGGAAGGCC
CATCATTGGCGTGATCCACAGCCCGTTCAATGGACAAACCGCGTGGGCGT
GGGTGGGCAACTCGATGTCTGAGTACCTATCCAATCTGCATCCGCAGCAT
TCGCCAAACAATCAGGCGCCCATCATTACAGTCTCGCGATCCCACACGGC
AGGTGCCAAGGATCTGGCGAGGGGCATCTTTGGCGAGAATGTCAGCCTGC
TGACGGCGGCGGGAGCTGGCTACAAGGTGCTCCCGGTGGTGGCCAACAAT
GCCACCGCCTATTTGCAC

BO12195.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-PA 1068 CG15743-RA 1..852 17..868 4235 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:22:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-RB 1450 CG15743-RB 136..987 17..868 4245 99.9 Plus
CG15743-RC 1959 CG15743-RC 645..1496 17..868 4245 99.9 Plus
CG15743-RA 1650 CG15743-RA 336..1187 17..868 4245 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13286351..13286879 17..545 2645 100 Plus
X 23542271 X 13286951..13287278 541..868 1610 99.4 Plus
Blast to na_te.dros performed on 2015-02-12 11:21:59 has no hits.

BO12195.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:29:03 Download gff for BO12195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-PA 1..852 17..868 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:02:00 Download gff for BO12195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-PA 1..852 17..868 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:22:38 Download gff for BO12195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 336..1187 17..868 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:28:50 Download gff for BO12195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 336..1187 17..868 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:28:50 Download gff for BO12195.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13286351..13286879 17..545 100 -> Plus
X 13286956..13287278 546..868 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:22:38 Download gff for BO12195.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13180384..13180912 17..545 100 -> Plus
arm_X 13180989..13181311 546..868 99   Plus

BO12195.complete Sequence

1099 bp assembled on 2006-10-11

GenBank Submission: FJ632353

> BO12195.complete
GAAGTTATCAGTCGACATGAGCGAAGACAAGATGAACGGACGCTCCATTC
GCATCAACCGGCTGCCGGCCACCATTGTGGCCATCCTGCTGACCTTTGTC
CTGGTCTACTTCCTCAATTTCCATCAGGAGGAGCGGCCAGCGATCTACGG
CATGCTGCGCAGTGAGAATCCCAGCCGCGTCAATCTACGCAAGATGCTAA
TAGCCGCCATACAGGCCGCCCAGCGTGGCGGTCTCGAGGTACTGGACGTG
GCCCGGAGTCGCCAGCTGAAGGAGCGCAGCAAGGGCAAGACGGACGAGGG
CGTCAATGATCCCTTCACGGATGCCGACGGCCGGTCACATTGTGTGATGA
AGCAGGGCCTGCAGCGAATCTTTCCCCGCGTACAAATCTTCTCCGAGGAG
GACAAGGAGCACTGCAAGCAGGCACACGGCTATGATCTAGATCCAACGGT
CCTCCACGAGACCGCACAGATACCGGATGTGACCGTAAATGCCCAGGATG
TCACTGTTTGGGTAGATCCGTTGGATGCCACCAAGGAGTTCACCGAGGAG
CTATACGAGTACGTGACCACCATGGTGTGCGTGGCAGTGGCCGGAAGGCC
CATCATTGGCGTGATCCACAGCCCGTTCAATGGACAAACCGCGTGGGCGT
GGGTGGGCAACTCGATGTCTGAGTACCTATCCAATCTGCATCCGCAGCAT
TCGCCAAACAATCAGGCGCCCATCATTACAGTCTCGCGATCCCACACGGC
AGGTGCCAAGGATCTGGCGAGGGGCATCTTTGGCGAGAATGTCAGCCTGC
TGACGGCGGCGGGAGCTGGCTACAAGGTGCTCCAGGTGGTGGCCAACAAT
GCCACCGCCTATTTGCACACGTCGAAGATCAAGAAGTGGGACATTTGCGC
CGGCGATGCTATTCTGCACGCATTGGGCGGCACAATGACCACGCTGAACG
ATCAGTTGATTAACTACGGACCAGAGGAATCGCCAGTCAATACGGAGGGC
CTGCTGGCCACCTTGGAGCAGCATGACGAGTACATGGACAAGCTGTCCAA
ATATCGCGAGGCGCACAATGGCAAGCTGGCGGCAAGCTTTCTAGACCAT

BO12195.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-RB 1068 CG15743-PB 1..1065 17..1081 5325 100 Plus
CG15743-RC 1068 CG15743-PC 1..1065 17..1081 5325 100 Plus
CG15743-RA 1068 CG15743-PA 1..1065 17..1081 5325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-RB 1450 CG15743-RB 136..1200 17..1081 5325 100 Plus
CG15743-RC 1959 CG15743-RC 645..1709 17..1081 5325 100 Plus
CG15743-RA 1650 CG15743-RA 336..1400 17..1081 5325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13286951..13287491 541..1081 2690 99.8 Plus
X 23542271 X 13286351..13286879 17..545 2645 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:48:47 has no hits.

BO12195.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:40:14 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 1..1068 17..1082 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:02:52 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 322..1386 17..1081 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:13 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 336..1400 17..1083 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:40:14 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 322..1386 17..1081 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:33 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
CG15743-RA 336..1400 17..1083 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:33 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
X 13286351..13286879 17..545 100 -> Plus
X 13286956..13287491 546..1083 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:13 Download gff for BO12195.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13180384..13180912 17..545 100 -> Plus
arm_X 13180989..13181524 546..1083 99   Plus

BO12195.pep Sequence

Translation from 16 to 1099

> BO12195.pep
MSEDKMNGRSIRINRLPATIVAILLTFVLVYFLNFHQEERPAIYGMLRSE
NPSRVNLRKMLIAAIQAAQRGGLEVLDVARSRQLKERSKGKTDEGVNDPF
TDADGRSHCVMKQGLQRIFPRVQIFSEEDKEHCKQAHGYDLDPTVLHETA
QIPDVTVNAQDVTVWVDPLDATKEFTEELYEYVTTMVCVAVAGRPIIGVI
HSPFNGQTAWAWVGNSMSEYLSNLHPQHSPNNQAPIITVSRSHTAGAKDL
ARGIFGENVSLLTAAGAGYKVLQVVANNATAYLHTSKIKKWDICAGDAIL
HALGGTMTTLNDQLINYGPEESPVNTEGLLATLEQHDEYMDKLSKYREAH
NGKLAASFLDH

BO12195.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15743-PB 355 CG15743-PB 1..355 1..355 1846 100 Plus
CG15743-PC 355 CG15743-PC 1..355 1..355 1846 100 Plus
CG15743-PA 355 CG15743-PA 1..355 1..355 1846 100 Plus
CG7789-PA 306 CG7789-PA 8..295 57..343 360 33.1 Plus